Amal016442.1
Basic Information
- Insect
- Agrilus mali
- Gene Symbol
- grn
- Assembly
- GCA_029378335.1
- Location
- CM055658.1:23834135-23845130[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9 9.7e+03 -2.7 0.0 26 32 9 15 8 20 0.80 2 2 2.1e-19 7e-16 58.5 4.7 1 35 311 344 311 345 0.98
Sequence Information
- Coding Sequence
- ATGGCGCATTACCGGTCTTTTAAATGCGGAGTACAATATCGTCAAGAGCCTGCCGGCCCGAAAAAGGTTAAATATGGGTATAATATGGTAAAAAGGCATCGCGAAGAATTCGACCAGAGGCCTCCAATAAACCAGGCGATCTATCAGCACGTCTCGCACGTAGTATTAACTCATTTTCGACAAGGGCTTCTGGAAACCATGTGGTGCAAATCATACGCGTCGAGGATGTCTTCGGCAGCGAGTCAAGTGTGCCGACCGCATTTTCACGCACCGCTCCATCCATGGCTCTCGGCCGAAAGCACGAAGCCCTTGGCACACTCGAGTCCTTGGGTGCCATTCGGCGGGGGCGCTGGCGACCCGGAAAAGTCGCAATCGCCCTCGTCGATGGCCGGAGGAGCACAACCCCACAACATTTTCTCGTTTCCACCAACGCCGCCCAAGGACAGCACGCCCGACTCCGTCGTAGTACCCACAACCCCAGGTGCGGCTGGTTCTTCGGCTGCCGATTACCAAAACGCCGTCGCGGCGGCAATGGGCGCCTTCATGCACGGAGGAGGCGACAACCACCACCATCAGCAGCAGAGCTGTGCACTGGATGTGAAGCCTTCGGCGACGTCTGCAGCGAGCAATAAGCAACGTGAAGGTAGTGAATATGAAACAACCGGAACTGCCTCGTCGGGCATGTTCAATGGTAACTTTGATAGCTCGTACGGGTCGTCCGCGTATGGCCACGGTATTCACGGGGCGGCGGCGTATTCGCCGCACCATCATGCAGCCGCAGCTGCGGCAGCCGCGGCCGCGGCAGCCGCTGCGGCCGCACATCAGGGCCACCACGGCAAGCAGAACGGCGGCCTCGTGACGACGCAGGGTGGCGCTCAGTCGCCGAACAAACCACGGAATAAGTCGAGAACGAGCGCCGAGGGTAGAGAGTGCGTGAACTGCGGTGCTACAAGTACGCCACTGTGGCGCAGGGATGGCACAGGGCATTATCTCTGCAACGCGTGTGGACTTTATTACAAAATGAACGGACAAAACAGGCCCCTCATCAAACCTAAGAGAAGACTGACGGTTAAGAAAAAATGTAGTGGCAAACAGAGATTAATTTCGAACGTAGGAGAATTATCGCGTAATCTCAATCCCTCACGTCCTGAAACAACGAAGAACACGTACACACGCATCACATCCTACTCCTTTTCCACGGACAAACCAATTGAATGCGATACGTTTACGTACCTACCCATAACCATACCCATACTTATGCCCATACCGTACGGGTAA
- Protein Sequence
- MAHYRSFKCGVQYRQEPAGPKKVKYGYNMVKRHREEFDQRPPINQAIYQHVSHVVLTHFRQGLLETMWCKSYASRMSSAASQVCRPHFHAPLHPWLSAESTKPLAHSSPWVPFGGGAGDPEKSQSPSSMAGGAQPHNIFSFPPTPPKDSTPDSVVVPTTPGAAGSSAADYQNAVAAAMGAFMHGGGDNHHHQQQSCALDVKPSATSAASNKQREGSEYETTGTASSGMFNGNFDSSYGSSAYGHGIHGAAAYSPHHHAAAAAAAAAAAAAAAAHQGHHGKQNGGLVTTQGGAQSPNKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTVKKKCSGKQRLISNVGELSRNLNPSRPETTKNTYTRITSYSFSTDKPIECDTFTYLPITIPILMPIPYG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00031472;
- 90% Identity
- -
- 80% Identity
- -