Amal003179.2
Basic Information
- Insect
- Agrilus mali
- Gene Symbol
- pnr
- Assembly
- GCA_029378335.1
- Location
- CM055654.1:34299355-34310162[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-17 1.1e-13 51.6 2.4 1 35 393 426 393 427 0.97 2 2 1.1e-18 3.8e-15 56.2 4.2 1 35 449 482 449 483 0.98
Sequence Information
- Coding Sequence
- aTGGAAACCAAGACAGCACATGCACAGGCTCAAGCCAAACATTCGCCATCAGCAACCGGTGGTGATATAAAGAGTGAGGGCGAAATAAAAACCGAAGAAACTGCAGAAACAGAACAGCCATCGACGGTCATCATCAGGCGGCAGGTCATAACTTCAGCGGGGACCATAGAAGAAACTTTAGAAAACGCTCCATCCGTAAAAGTAGAAGACGGTAACAAGAAAATTGTCAACAATGGCGCTAGCAATACgactaacaataaaaacaaaagcacAGAAAGTGTGTCTAAAAACAGTTCGCCGGAGAGGTTGCAACAGCCACAGGAAGACAACCAACagcaacaaaattttgatcTTGACCAACAACATCAACAGCAACAGCAACACCAACAGCAACAATCAAActcacaacaacaacaacagcaacagcagcagcagcgTTTATTTAACGAACAAAACGTGATAACAACGACAGAACAGTACGTGAACAACAATCAAGAATACAGATCAGTTCCGGAGCACACCATAGAATATACGACCACAGTAGAAGTACCAACGGTTGGTACGATCCAGCATATCCAAGTGGAAGGTGCGACCTATTCAACGGCGGAAGCAGCAGCAGTAGCTGCAGCAGCTGCAGCAGCAGCCGAAGATGCTAAACATGTCGAATATACAAATCTAGAAAGTGTCTCGTCCACCCAGTACCCAAACTCCCAGCAGCATTTCCCCCCCGACGGGAACCACCAGTACATTTCGCAAGGACAGTACCAGCAACAACAGTACCAAAACTACACCGTCGCCAGGGAGAACGATGACAGTCCGCCAAATTCCTTGCTCTACAAGGATGATCCAAATCTAGCCTCGTCAAGGATGTATCAGATTAACTATTTGAAGGGTTCCTACGAGTTGCAACCGGCCCAGTCGACGAGCAACCAGGTGACCCTGATAGGTCACACTGGTACGAGTTACCAGTACACGGTACCGGCAAACGCGACCACTTGGGGTTCATCAAACAGCAGCAACACCGAATACACTTCTTATCCTTCATCAAATGCCATTGGAATCCATCAACCAGGAGAAAACATTTCGTACCAGAATTACGGGTCGAACGCGGCTTGGACTAACATGTCCTTGGAAGAAGGGTACGACCCGTCAATACAAGAAGTTGATGTTAAGGAGTGTGTTAATTGTGGGGCGAGTATAACACCCCTGTGGAGGAGGGATGGGACTGGGCATTACCTGTGCAATGCTTGTGGATTATATAATAGGATCAATGGGGTTAATAGGCCTCCAGTTAGGACTACCAAGAAATTACCAacaAATGGAAACAGAAGGACCGGGGTGTCCTGTGCAAATTGCAGAACATCCACCACGACACTTTGGAGAAGAAACAATCAGGGAGAGCCTGTGTGCAATGCATGTGGATTATACTTTAAGTTACATGGGGTGGATAGGCCCCTAAGTATGAGAAAAGAAGGAATTCAAACACGTAAAAGGAAACCAAAAAGTTCCGGATCTAGTCAAAATCACATCAATTCTTTAGCAGGATCGCGAAACATTGCCCTACAAAGGAACATGAtCTTACACAATTCCATCTATGCCTCTAGTTTGAGCGCGGAACTAGGATCACCAGCAGGCGAACAATATCAATTTCCGATCACAGTAAGTCAAGCAGTCTGTCGCATGCCCCTACCCAGTGCCGAAATGTTAAGTCGACAGACCATTTCGaaTATACCACCCCTTGAACCGAACGTTATCCCTCGAACGGTGGATGAGCAAGCCAGCGTTATTACGTCAACGTCGGTTGCTAGCGAATTACACAGGACCGAATTCGGACAGACTGACGGACACCAAACACCAAAGTAA
- Protein Sequence
- METKTAHAQAQAKHSPSATGGDIKSEGEIKTEETAETEQPSTVIIRRQVITSAGTIEETLENAPSVKVEDGNKKIVNNGASNTTNNKNKSTESVSKNSSPERLQQPQEDNQQQQNFDLDQQHQQQQQHQQQQSNSQQQQQQQQQQRLFNEQNVITTTEQYVNNNQEYRSVPEHTIEYTTTVEVPTVGTIQHIQVEGATYSTAEAAAVAAAAAAAAEDAKHVEYTNLESVSSTQYPNSQQHFPPDGNHQYISQGQYQQQQYQNYTVARENDDSPPNSLLYKDDPNLASSRMYQINYLKGSYELQPAQSTSNQVTLIGHTGTSYQYTVPANATTWGSSNSSNTEYTSYPSSNAIGIHQPGENISYQNYGSNAAWTNMSLEEGYDPSIQEVDVKECVNCGASITPLWRRDGTGHYLCNACGLYNRINGVNRPPVRTTKKLPTNGNRRTGVSCANCRTSTTTLWRRNNQGEPVCNACGLYFKLHGVDRPLSMRKEGIQTRKRKPKSSGSSQNHINSLAGSRNIALQRNMILHNSIYASSLSAELGSPAGEQYQFPITVSQAVCRMPLPSAEMLSRQTISNIPPLEPNVIPRTVDEQASVITSTSVASELHRTEFGQTDGHQTPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00031470;
- 90% Identity
- -
- 80% Identity
- -