Amal003174.1
Basic Information
- Insect
- Agrilus mali
- Gene Symbol
- pnr
- Assembly
- GCA_029378335.1
- Location
- CM055654.1:34226551-34229668[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-18 9e-15 55.0 3.2 1 34 11 43 11 45 0.97 2 2 2.6e-19 8.7e-16 58.2 5.4 1 35 65 98 65 99 0.98
Sequence Information
- Coding Sequence
- ATGGAATTTCAGTTTGGCGAGGGGAGGGAATGTGTCAACTGTGGTGCCATATCCACACCCCTTTGGCGCAGGGATGGTACCGGACATTACCTTTGCAACGCCTGTGGTCTCTACCATAAAATGAATGGAATGAACAGGCCGCTTATCAAACCATCAAAACGACTGACCGCAACTCGTCGATTGGGACTGTGTTGCACCAACTGTGGTACAAGGACGACGACGCTGTGGCGTCGTAACAACGACGGCGACCCCGTCTGTAACGCCTGCGGCCTCTATTTCAAGCTCCACGGGGTGAATCGACCCCTCGCAATGCGCAAAGACGGCATTCAAACACGAAAAAGGAAACCGAAGAAACCAGCCGGTGGGGACCGCGACGAAAACGGTTCTGCCTCCGTCGACGactCAAAGTCCAACGTGATCCAGCAGTCGTCCCAGTCAACTACCTCCAATACTCACAACTCCCACCACAACAACATGGAAGATTCCTCAAAAGGATCTCCCATCGAACGTCCCTACTTGGGACAAACGTCCCTCCTTTCGGCCAGTTCAAATGGCATAAAAAGTGAACCAGGATACGACTACAGTTGTCTCCAAAACCAGTCGTATCCTTTTCAACAAGTCTTTGGGTTTGGGGCTACAGCAGGAGGCAACGATGTGGCCTACCACCATCAGCACCATGTAACTGCCGCTGCTAAACTTATGGCATCGTCTTag
- Protein Sequence
- MEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGDPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPAGGDRDENGSASVDDSKSNVIQQSSQSTTSNTHNSHHNNMEDSSKGSPIERPYLGQTSLLSASSNGIKSEPGYDYSCLQNQSYPFQQVFGFGATAGGNDVAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01537514;
- 90% Identity
- -
- 80% Identity
- -