Basic Information

Insect: Agrilus mali
Gene Symbol: -
Assembly: GCA_029378335.1
Location: CM055659.1:24627937-24633765[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.027 2.6 9.7 0.6 3 23 126 146 125 146 0.97

2 27 1.9 1.8e+02 3.9 3.8 1 23 150 172 150 173 0.93

3 27 0.27 26 6.5 0.1 2 23 179 200 178 200 0.96

4 27 2.4 2.4e+02 3.5 1.7 1 23 206 229 206 229 0.93

5 27 0.041 4 9.1 0.2 1 23 235 257 235 257 0.97

6 27 0.25 25 6.6 5.3 3 23 267 287 266 288 0.95

7 27 2e-05 0.002 19.5 0.9 2 23 309 330 308 330 0.97

8 27 0.0025 0.25 12.9 3.8 1 23 336 358 336 358 0.98

9 27 0.0016 0.16 13.5 0.9 1 23 364 386 364 386 0.99

10 27 3.1 3e+02 3.2 4.4 1 21 392 412 392 413 0.94

11 27 0.27 27 6.5 0.4 3 23 549 569 548 569 0.96

12 27 7.8 7.6e+02 1.9 4.3 1 23 573 595 573 596 0.93

13 27 0.11 11 7.8 2.6 1 23 601 623 601 623 0.96

14 27 0.0092 0.9 11.1 0.1 3 23 909 929 908 929 0.97

15 27 1.5 1.4e+02 4.2 2.7 2 23 962 983 961 983 0.96

16 27 0.2 20 6.9 3.6 1 23 989 1012 989 1013 0.95

17 27 0.06 5.8 8.6 1.7 3 23 1021 1041 1019 1041 0.98

18 27 0.00012 0.012 17.1 4.2 1 23 1051 1073 1051 1073 0.98

19 27 0.00039 0.038 15.5 1.3 1 23 1079 1101 1079 1101 0.99

20 27 0.0035 0.34 12.5 5.6 1 21 1107 1127 1107 1128 0.96

21 27 0.94 92 4.8 1.4 3 23 1258 1278 1256 1278 0.96

22 27 0.0055 0.53 11.8 1.8 1 23 1282 1304 1282 1305 0.96

23 27 0.082 8 8.1 0.3 1 23 1310 1332 1310 1332 0.96

24 27 3.3 3.2e+02 3.1 9.9 1 23 1338 1361 1338 1361 0.96

25 27 0.0022 0.22 13.1 2.6 1 23 1367 1389 1367 1389 0.98

26 27 9.8 9.6e+02 1.6 1.2 2 20 1398 1416 1397 1420 0.87

27 27 7.7e-05 0.0075 17.7 0.1 2 23 1425 1446 1424 1446 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.027	2.6	9.7	0.6	3	23	126	146	125	146	0.97
2	27	1.9	1.8e+02	3.9	3.8	1	23	150	172	150	173	0.93
3	27	0.27	26	6.5	0.1	2	23	179	200	178	200	0.96
4	27	2.4	2.4e+02	3.5	1.7	1	23	206	229	206	229	0.93
5	27	0.041	4	9.1	0.2	1	23	235	257	235	257	0.97
6	27	0.25	25	6.6	5.3	3	23	267	287	266	288	0.95
7	27	2e-05	0.002	19.5	0.9	2	23	309	330	308	330	0.97
8	27	0.0025	0.25	12.9	3.8	1	23	336	358	336	358	0.98
9	27	0.0016	0.16	13.5	0.9	1	23	364	386	364	386	0.99
10	27	3.1	3e+02	3.2	4.4	1	21	392	412	392	413	0.94
11	27	0.27	27	6.5	0.4	3	23	549	569	548	569	0.96
12	27	7.8	7.6e+02	1.9	4.3	1	23	573	595	573	596	0.93
13	27	0.11	11	7.8	2.6	1	23	601	623	601	623	0.96
14	27	0.0092	0.9	11.1	0.1	3	23	909	929	908	929	0.97
15	27	1.5	1.4e+02	4.2	2.7	2	23	962	983	961	983	0.96
16	27	0.2	20	6.9	3.6	1	23	989	1012	989	1013	0.95
17	27	0.06	5.8	8.6	1.7	3	23	1021	1041	1019	1041	0.98
18	27	0.00012	0.012	17.1	4.2	1	23	1051	1073	1051	1073	0.98
19	27	0.00039	0.038	15.5	1.3	1	23	1079	1101	1079	1101	0.99
20	27	0.0035	0.34	12.5	5.6	1	21	1107	1127	1107	1128	0.96
21	27	0.94	92	4.8	1.4	3	23	1258	1278	1256	1278	0.96
22	27	0.0055	0.53	11.8	1.8	1	23	1282	1304	1282	1305	0.96
23	27	0.082	8	8.1	0.3	1	23	1310	1332	1310	1332	0.96
24	27	3.3	3.2e+02	3.1	9.9	1	23	1338	1361	1338	1361	0.96
25	27	0.0022	0.22	13.1	2.6	1	23	1367	1389	1367	1389	0.98
26	27	9.8	9.6e+02	1.6	1.2	2	20	1398	1416	1397	1420	0.87
27	27	7.7e-05	0.0075	17.7	0.1	2	23	1425	1446	1424	1446	0.96

Sequence Information

Coding Sequence: ATGTTGCTTTTTGTTTCTAATGTTGTCAGggaaacctacataagtacaataaaagttgaaaTCGACGAATGTAAAATAGAACAACAATGGGATGATAAACTTTCAACAGAAGAAATAATATCTGGTGTGGTGACTTGTTCTATATGCCCAGGTAAAACTTTCGATAGCGATGATCTTCATCAAAGATTTATAGCCACAGagaaaaaggaattttattgTCATAGTCATCCATCGTGTACAgacaaatttacaaaacatgAATTGGCCAGGCATTGTCACGACCacggtataaaaataaaaaaattagatacaTTTTTCCGTAAGGcacaaacaaaaaacacaaACACCAACTTCATCGGGCGTATAGAAGAAGCTTGCGAAATATGTTttggattatttaaaaataaaaatgacttAAAAACCCATTACGAAACCCACGAAGATCAGTACACATGTCAAGAGTGTAACATTGGTTTTAAAAAGATCATGAATTACATTTGCCATGCACAAACTCACCACGAAAATAAACTACTCACTTGTCCCCTTTGCGGGGTTACAACAGAAAAAACAAACCCAATGAGGGATCACATAAGAAATCACGATCAGTTCAAACGGTACAAGTGTAACACCTGCGAAAGCCGGTTCCCGTATTATTCAATATATTCTGaacacataaaatataatcacAGTGACACAAAGGCTTTCGAGTGTGACATTTGCGAGGGGAAATTAAAATCTTCAGGTGCGTTGCGTAATCACAAACTCAATCACAAATGGCAAGCAACAGGAGAAAAACATTGCGAAGTGTGTAACTTCAAATTTTCGTCTTACATTTCCATGAAGaatcattatttaaaacatcacCCTGTTTCCTCATCTTCAacgaaaaataaagtttttaaaccCTCTCCAAAACTAGCGTCAGTTTGCAACTTTTGCGGGGAAAACTTTACGTCAAGGAAGTCATTGAACAAGCATCTGATGGTACACACCGACGATAAACACTTTAAGTGTTCCTACTGCGACAAAAAGTTCGTAACGAACCACTCGAAGGGTGTACACGAACGGATGCACACAAGGGATGAATCGTACGAATGTCCTTTTTGTATGAAGACGTTTAGTCAGAGGGGCAGCATGGTCCTGCACTCTCGAACCCACACAGGCGAAAAACCTTATTCGTGTCAGTTGTGTGGCTGTGGGTTCACATGTAAACCTCATCTTGAtaaccatttaaaaaattgtagggaaaattggaaaataaaaattgaattcgCAGAATGTAAAGTAGAAGAACCATGGGATGATGATGAAGCTTCAGTAGAAGAACCACCAAATGACGAAAAACCACTAGATGCTAAAGCGCCATGGAATAATTTAACTTCAACAGATAATATAATACATGAAGTGCCAGCTGGTGTGGTGTACTGTTCCATATGTCCAATTAAAAGATTTGATAACGAAGATATCCATCAAAGATATGTCGCCTCTATAGAatcaaagaaattttattgtcagACTCACTCATCCTGTACCCAAAAGTTTACAAAACATGAACTGGCCAAGCACTACTACGAACACGGaataaaaagtcaaaattggAATACACTTTTCCGAAAGGCGTTGCAAGAGCGTGTCGAGGAAGCATGCGAAATATGTTTCAAActatttgaaaatgaaaaccGTTTAGAAATCCATTATAAATTCCATGAAGATCAACACTTTTGCCAGATGTGTAAAGTTGGTTTTAAAAGAGTCATGGATTACGTTTTACATTCACAAAAGCACCACGAAAAATTTTGGTTCACTTGTCCTGTTTGTAAAACTACAATGAAAAAGAAGGATCATATCGAAAGACATGTATATAATCATGATCAGTTCAAACGTTACAAGTGTAAAACGTGCGAAAGCCGggaAAATTGGAtcgtaaaaattgaaatcggAGAATACAAAATAGAAGAACCATGGTATAGTGAAGTTTCACTTGAAGAACTATCGAATGATGACGTCTCAATAGAAGAAGACCTATTTAATAGTATGATTTCTAGACAAGAACTACTGAACAAAAAAGCTTCAAGAAAAGAACCACTGAACAAAAAAGCTTCAAGAAAAGAACTACTGAACAAAAAAACTTCAAGAAAAGAACCACTGAACAAAAAAGCTTCAATAAAAGAACCACTGAACAAAAAAGCTTCAAGAAAAGAACCATCGAACAAAAAAGCTTCAAGAAAAGAACCACTGAACAAAAAAGCTTCAAGAAAAGAACTACTGAACAAAAAAGCTTCAAGAAAAGAACCACTGAACAAAAAAGCTTCAAGAAAAGAACTACTGAACAAAAAAGCTTCAAGAAACGAACCAtcgaacaataaaattttactaaaagaaCCATTTAATGGTAAATCGTCAATAGAAAGACCCTTGACCTATAAAGGTACACTAACAGAGCCAGGGAATGATAAAAGTTCAATAGAAGAGATAATGAGTGAAGTACAAGCTGGTGTCGTGTACTGTTCCATATGCCCAGTACAAAGATTTGATAGTGAAAATCAGCATCAAAATTATGTCGGCTCAAAGGAGACAAAGGAATTTTATTGTCAGACCCATTCATCGTGCacagaaaaatttacaaaacacgAACTGGCCAAGCACTGCTACGAACACGGaataaatgtacaaaattGGAGTACGTTTTTTCGAAAAGCTCTACAAGCACGTGTCGAGGAACCATGTGAAATATGTTTTGAACTATTTGAAGATAAAAACAGTCTCGAGGCTCATTACGAAACCCACGTAAATCACTACACTTGCCAAGTGTGTAAAGCtggctttaaaaaaatcatggaTTACATTTGTCATGCACAATCGCATCACGAGAAGGGATTGTTAACTTGTCCTGAGTGTAAAGTTACAAAGGAAAACAGATGCTACATGAAAAGGCACATACAGAGTCACGATCAGTTCAAAAGATACAAATGTAACACATGCGCGAATCGATTTTCgtattattcaaaatatttagcGCACATATCACAGAATCATCACAGTGACATAAAGACCTTCGGATGTAACATTTGCAGCAAAAGATTAAGTTCTTTAAACAGATTGCGTACTCATAAACTGACCCACCTGATGACACATAAAAACGATAAATGGTTCAAATGTTCATATTGCGACAAAAGGTTCAGGAGGAAATACGAACGCAGTACACACGAACGAATTCACACCGGGGTTAAACCATACGAATGTCCTTATTGCATGAAGGCGTTTAGTCATGTCAGCAACATGCTCGTACATTCCCGAACTCATACTGGAAGAAATCCTTACAGATGTCAATTGTGTGGTTGCGGATTCAATACTAAACGTCATCTTAACCAACATTTAAAACATTGGATTTTTTCAACTTACTTTGTTTTTAGGGGAAGCTGTAGAGtgaaaattgaaatagaaGAATGTAAAATAGAAGAGCAATGGGACGATAATAGCTCATCAGAAGAAATATTCACTGAAACAATATCCGGTTCGGTGTATTGCTCCGTATGtccagtaaaaatttttgaaaacgaaGAGGAACATCAAAAATATGCCGCCTCAAGAGAATCCAAAGAATTTTATTGTCGTACTCATTCATCGTGTGCCGAAAAATTTACAAGACACGAATTGGTCAGGCACTGTAACGAACACGGaataaaagtacaaaattgGAATACTTTTCTTCGTGAGGCGTTACAAAAAAATCCCAAACCCCTGAAACGacaaaactattttcaaaTAGCGTGTGAAATATGTTGTGAACTGTTCAAAAATCACATCGATCTGGAAACGCATTATGAAACTCACGAAGATCAATACACTTGTAAAATTTGTCAAGCtagtttcaagaaaattatGGACTACGTTGGTCATATAAAAACGCACCACGAAAAAGGATTGTTCACTTGTCCTGTTTGTGGAGTTACAAATGAAAAAAGGAACAACATGAAGAAGCACATAGTAAATCATGACCAGTTCAAACTGTACAAATGTAACACATGCGATTGTCGGTTCCCGTATTACTCGAGATATTATCATCATATACAGCATTATCACAGTAATACAAAGGCCTTCAAGTGTGACATTTGCGGTGCCAAATTGAGCTCTTCCCATAAATTACGCAGTCATAAGAACAATCACAAATGGCAAGCATCGGGTGAAAAATACTGTGAAGTGTGTAACTTTGAATTCATTTCTTATAATTCCGTGATGTATCATTATTGGAAACACCATCCTTTTATGCTTGTTTGCAATGTGTGCGGAATGAGCTTTAAATTGAGAACAGCTTTGAGCAAGCATATGATAATACATAAAGGCGATAAATCTCGCGAAGGTTGA
Protein Sequence: MLLFVSNVVRETYISTIKVEIDECKIEQQWDDKLSTEEIISGVVTCSICPGKTFDSDDLHQRFIATEKKEFYCHSHPSCTDKFTKHELARHCHDHGIKIKKLDTFFRKAQTKNTNTNFIGRIEEACEICFGLFKNKNDLKTHYETHEDQYTCQECNIGFKKIMNYICHAQTHHENKLLTCPLCGVTTEKTNPMRDHIRNHDQFKRYKCNTCESRFPYYSIYSEHIKYNHSDTKAFECDICEGKLKSSGALRNHKLNHKWQATGEKHCEVCNFKFSSYISMKNHYLKHHPVSSSSTKNKVFKPSPKLASVCNFCGENFTSRKSLNKHLMVHTDDKHFKCSYCDKKFVTNHSKGVHERMHTRDESYECPFCMKTFSQRGSMVLHSRTHTGEKPYSCQLCGCGFTCKPHLDNHLKNCRENWKIKIEFAECKVEEPWDDDEASVEEPPNDEKPLDAKAPWNNLTSTDNIIHEVPAGVVYCSICPIKRFDNEDIHQRYVASIESKKFYCQTHSSCTQKFTKHELAKHYYEHGIKSQNWNTLFRKALQERVEEACEICFKLFENENRLEIHYKFHEDQHFCQMCKVGFKRVMDYVLHSQKHHEKFWFTCPVCKTTMKKKDHIERHVYNHDQFKRYKCKTCESRENWIVKIEIGEYKIEEPWYSEVSLEELSNDDVSIEEDLFNSMISRQELLNKKASRKEPLNKKASRKELLNKKTSRKEPLNKKASIKEPLNKKASRKEPSNKKASRKEPLNKKASRKELLNKKASRKEPLNKKASRKELLNKKASRNEPSNNKILLKEPFNGKSSIERPLTYKGTLTEPGNDKSSIEEIMSEVQAGVVYCSICPVQRFDSENQHQNYVGSKETKEFYCQTHSSCTEKFTKHELAKHCYEHGINVQNWSTFFRKALQARVEEPCEICFELFEDKNSLEAHYETHVNHYTCQVCKAGFKKIMDYICHAQSHHEKGLLTCPECKVTKENRCYMKRHIQSHDQFKRYKCNTCANRFSYYSKYLAHISQNHHSDIKTFGCNICSKRLSSLNRLRTHKLTHLMTHKNDKWFKCSYCDKRFRRKYERSTHERIHTGVKPYECPYCMKAFSHVSNMLVHSRTHTGRNPYRCQLCGCGFNTKRHLNQHLKHWIFSTYFVFRGSCRVKIEIEECKIEEQWDDNSSSEEIFTETISGSVYCSVCPVKIFENEEEHQKYAASRESKEFYCRTHSSCAEKFTRHELVRHCNEHGIKVQNWNTFLREALQKNPKPLKRQNYFQIACEICCELFKNHIDLETHYETHEDQYTCKICQASFKKIMDYVGHIKTHHEKGLFTCPVCGVTNEKRNNMKKHIVNHDQFKLYKCNTCDCRFPYYSRYYHHIQHYHSNTKAFKCDICGAKLSSSHKLRSHKNNHKWQASGEKYCEVCNFEFISYNSVMYHYWKHHPFMLVCNVCGMSFKLRTALSKHMIIHKGDKSREG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -