Basic Information

Insect: Agrilus mali
Gene Symbol: -
Assembly: GCA_029378335.1
Location: CM055659.1:24686486-24706333[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0025 0.24 12.9 0.5 1 20 76 95 76 97 0.95

2 19 1.8 1.7e+02 4.0 5.1 1 23 103 125 103 125 0.96

3 19 0.023 2.2 9.9 0.3 2 23 318 340 318 340 0.94

4 19 0.007 0.68 11.5 1.3 3 23 346 366 345 366 0.97

5 19 0.042 4.1 9.1 4.1 1 23 372 395 372 395 0.96

6 19 0.00017 0.017 16.6 1.8 1 23 400 422 400 422 0.98

7 19 5.2 5.1e+02 2.5 1.0 2 23 459 480 458 480 0.93

8 19 0.12 11 7.7 1.4 1 23 672 695 672 695 0.93

9 19 0.015 1.4 10.5 2.2 1 23 700 722 700 723 0.95

10 19 0.00038 0.037 15.5 1.1 2 23 750 772 749 772 0.96

11 19 0.026 2.6 9.7 0.5 3 23 1034 1055 1033 1055 0.96

12 19 0.055 5.4 8.7 0.9 1 23 1061 1084 1061 1084 0.93

13 19 7.5 7.3e+02 2.0 0.9 2 23 1245 1266 1244 1266 0.94

14 19 8.4 8.2e+02 1.8 0.8 2 23 1471 1492 1470 1492 0.93

15 19 0.085 8.3 8.1 0.2 3 23 1706 1727 1704 1727 0.96

16 19 0.13 12 7.6 2.6 1 21 1733 1753 1733 1756 0.90

17 19 0.0032 0.32 12.6 1.0 3 23 1969 1990 1968 1990 0.96

18 19 0.12 11 7.7 2.8 1 23 1996 2019 1996 2019 0.93

19 19 1.5 1.4e+02 4.2 4.5 1 23 2024 2046 2024 2047 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0025	0.24	12.9	0.5	1	20	76	95	76	97	0.95
2	19	1.8	1.7e+02	4.0	5.1	1	23	103	125	103	125	0.96
3	19	0.023	2.2	9.9	0.3	2	23	318	340	318	340	0.94
4	19	0.007	0.68	11.5	1.3	3	23	346	366	345	366	0.97
5	19	0.042	4.1	9.1	4.1	1	23	372	395	372	395	0.96
6	19	0.00017	0.017	16.6	1.8	1	23	400	422	400	422	0.98
7	19	5.2	5.1e+02	2.5	1.0	2	23	459	480	458	480	0.93
8	19	0.12	11	7.7	1.4	1	23	672	695	672	695	0.93
9	19	0.015	1.4	10.5	2.2	1	23	700	722	700	723	0.95
10	19	0.00038	0.037	15.5	1.1	2	23	750	772	749	772	0.96
11	19	0.026	2.6	9.7	0.5	3	23	1034	1055	1033	1055	0.96
12	19	0.055	5.4	8.7	0.9	1	23	1061	1084	1061	1084	0.93
13	19	7.5	7.3e+02	2.0	0.9	2	23	1245	1266	1244	1266	0.94
14	19	8.4	8.2e+02	1.8	0.8	2	23	1471	1492	1470	1492	0.93
15	19	0.085	8.3	8.1	0.2	3	23	1706	1727	1704	1727	0.96
16	19	0.13	12	7.6	2.6	1	21	1733	1753	1733	1756	0.90
17	19	0.0032	0.32	12.6	1.0	3	23	1969	1990	1968	1990	0.96
18	19	0.12	11	7.7	2.8	1	23	1996	2019	1996	2019	0.93
19	19	1.5	1.4e+02	4.2	4.5	1	23	2024	2046	2024	2047	0.91

Sequence Information

Coding Sequence: ATGTGTGGACCCTTTAAATTTGTTCGTGACGTCAAAGATGATAAGAGAGGAAGACGTTTCTTCATCGACCATGTTCATATGCAGCACATGTCAACTTCCCTTCAATCGCGTGGATCTGAAGAACCACGTGTACAATGCAGATCTGGGCGTTTACGTGTGCTATTGGACGATCCTTTGTCGAACGATTACGATCAAGAAACGTCTCAGTCTGGCACTCAAATGATTTACGAATGCGAAATATGTACTCAGATGTTCGCGCGTAAAAATGAGTTTCTTAGACATCACGTCAGTGAAATCGATAACACGTTCAACTGTTGCCGGTGTCATGTGAGTTTCTATAACACGAACGATCTCTACGAGCATTATGAGGTTCATAAAAACGATCCGATCGTCATGTCAGAGAACGAGTTCGACTGTACGGAGAATATCGAGGCCGTCATGAACATCCCTAATGAGGAATCGATCAATGACTCGTCATCGAACGAGTTACTCTATATATTGGACGATTCGCAATGCGTTAACGAAGTGGTAATCGATGAGGTATCGGAATTGACCAACATTAaacaggaaaataaaaatgacgaAGATAGTTACACATTGGTTCAATTCGAACACGGCTACGTGTTACCTAAACTGCTCGATTCGAAGCAGAAACAAACGAAAAAGACTCGGAAACAGCAGGGCCCTTTTGTAACAGTAAAACCCGAAAAAGGTGGAAAAAATGAAACCAGTGTACTCATTAAGAGGGCGACTGGTACGCAAACAAAATCGCGGCTTTTACAGCCGAAAAGGCGACACGAAATGCCCGACTTTTCAGCTTCAAGCTACATCATCCTCAATCCGAACGACGAGGTAGACATACCTCTTTTGAAGTGTTTGCGATGCGAACAgctgtttattaataaattcgtttTCTTTCGTCATGTCGAGAAGGGAAAGTGTTTCGTAAATAGCTGTGACGTGTGCACCGCGACGTTCAACAAGAATTCAGAGTTTTATAATCATTACATAGTCGAACACACTGACAGAGCTATTTGCAACTACTGTTTCCGAACGTTCATGTACGAAAAGAACGTTAAGGAACATATGCTCAGGCATCTCGATCAGTTTAGGCATCGTTGTGAGGAATGTAGCAAAGGTTTCTATACGATACGCGAGTATAGAAACCATTATAAAAATCGACATATGGGAATCAGGCACCAGTGCGAGGTATGCAGTAGGTCATTCGCCGATgagtattattttaaaagacaCGTTGCCACTCACGTCAAAACTCTTCATAAATTACAAGAAAATTCGCTACGCAGAAGCTTAAGGTTGTCCGTGAGAAACCAAAATGCCAGAAGTGTCGTAAATGAGATTTCCTCCACTTGGAGTTGTAGTTCGTGTTTCGATGCTTTCTCTTCGTTGGCGGAATataaacaacataaaaaatttcataaaactgTTGCGGCTATTGCAATTAAACGCGAAGAAGGTATATCCCATAAGAAAGATAATcctaaatacaaaaatgatGAATCTCCTGACGACTTTGCTCAAAGTTCGGACATTTCCAGTGAATCAGAATCAGAGTCCGAATATGAAGCAACTGAAAGTGATGGTGTGTCAAGCAGTTATTCGGACGTATCGTGGAGTGAGAAACAAACAACTttacacaaaaagaaaacagggTCAGAAAACTTTAACCTATCAAAAAATCAGCTAGAATCAAATCAAGCGAGTGAAGTAATAGATAATAAGGTTACAACAACTCATATTAGTTCAAATAATCAAGAATTAGCCTCTTTGAACAGAGAAAAAGTAACAAATTCAAAGGTTTTTGGCAGGACCTCAGCCCTAAATAACGACATAGAAGCCAACGGATCAGTAGATTCCACAGAATTACGTAATAACGTGATAACCTTGGCTGCGATTACTGATGACCATTTTCGATGTGACCAAGAGGATCAAATTGAATTAGAACATCCGTTAAGAGATCACTTGAAATCAGTGCATGGCAAAGACGGGCCATTTAAATGCGCCTCCTGTCCGAAAGAGTATACTACTTATAGATCCCTCTACTACCATGTTGCTTATCGTCACGAtggtaaaaagtttaaatgttGGGACTGTCGAAAAGGTTTCGATTCCAAAGAGGAAGTCATTTATCACAAGAAACTGCATCATCAAACCTACTGTgatatttgcaaaaaatattatatcacCTCACCCAAAAAGCATAATCAATTTCACGAAGGCGAAATCAAATGCACAGTATGTAATAAAACCTATAAAGGTAAAGAAAGTTTTGGAAAACATATGCGCCAAGTACATGGGGTGGCAAAattCCAAGAAACTTCATTGCGCAGAAGTTCAAGGTTACGTACGAAAAGCCAACCTTCCAATAGTTGGAGTTGTAGTTCGTGTTTTGATATTTTCTCTTCGTTGGCGGAATacaaagaacataaaaaatttcataaaactgTTGCGGCTATTGCTATTAAACGTGAAGAAGATATTTCCCATAAGAAAGATAATAATCCTAAACGCAAAAATGATGAATCTCCTGAAGACTTTGCTCAAAGTTCGGACATTTCGAGTGAATCGGAATCAGAATCCGAATATGAAGCAATTGAAAGTGATGGTGTGTCAAGCAGTTATTCGGACGTATCGTGGAGTgagaaacaaacaaattcacacaaaaagaaaacagggTCGCAATACTTAAACATAGCTAAAAATCACCTAGAATCAAATCAAGCCAGCGAAGTAATAGACAATAAGGTTACAACAACTCAAATCATTTCAAATAATCAAGAAATATCCTCTGTgaacaaagaaaaagtaacaaaTTCAAAGGTTTCTGGCAGGACCTCAGCTCTAAAAAACGATATAGAAGCCAACGGATCAGTAGATTCCACAGAATTACGTAATAACGTGATAACCTTGGCTGCGAGTACTGATGACCATTTTCGATGTGACCAAGAGGGTCAAAACGAATTAGAACATCCGGTAGATTATTTGTATGATCAATCGAATTCGATCAACTCAAACAAGCAAAAATCACCTTGCGccaatgaaaaaaaatctataaaatCAAAGCGATATGAGGGAATATGTTCCTTctgtaatataaaatttaaattaagcaTTGAGTTAAGAGATCACTTGAAATCAGTGCATGGCGAAGACGGGCCATTTAAATGCGCCTCTTGTCCGAAAGAGTATGCTACTTATAGATCCCTCTACAAACATTTTGCTATTCGTCACGAtgAATCCGAATATGAAGCAATTGAAAGTGATGGTGTGTCAAGCAGTTATTCGGACGTATCGTGGAGTgagaaacaaacaaatttacacaaaaagaaaacagggTCGCAATACTTAAACATATCTAAAAATCACCTAGAATCAAATCAAGCCAGCGAAGTAATAGACAATAAGGTTACAACAACTCAAATCATTTCAAATAATCAAGAAATATCCTCTAAgaacaaagaaaaagtaacaaaTTCAAAGATTTCTGGCAGGACCTCAGCCCTAAATAACGATATAGAAGCCAACGGATCAGTAGATTCCACAGATTTACGTAATAACGTGATAACCTTGGCTGCGAGTACTGATGACCATTTTCGATGTGACCAAGAGGGTCAAAACGAATTAGAACATCCGGTAGATTATTTattCCAAGAAACTTCATTGCGCAGAAGTTCAAGGTTACGCACGAAACGCCAACCTTCCAATAGTTGGAGTTGTACTTCGTGTTTCGATGTTTTCTCTTCGTTGGTGGAATacaaagaacataaaaaatttcataaaactgTTGCGGCTATTGCATTCAAACGCGAAGATGATATTTCCCACAAGAAAGATAATAAACCTAAGAGCAAAAATTATGAATCTCCTGAAGACTCTGTTCAAAGTTCGGACAATTCGAGCGAATCTGAATCAGAATCCGAATATGAAGCAATTGAAAGTGATGGTGCGTCAAGCAGTTATTCGGACGTATCGTGGAGTGAGAAACAAAcaactttaaacaaaaagaaaacgaggTCACAAAACTTAAACTTACCAAAAAATCAGCTAGAATTAAATCAAGCGAgtaaaataatagataatcaGGTTACAACAAATCAAATCAGTTCAAATAATCAAGAATTATTCTCTTTgaacaaagaaaaagtaacaaaTTCAAAGGTTTCTAGCAGAACTTCAGCCCTAAATAACGATATAGAAGCCAACGGATCACTAGATTCCACTGAGTCACGTAATAACGTGATAACAATGGTTGCGACTATTGATGACCCTTTTCGATGTGACCAAGAGGATCAAATGGAATTAGAACATCCGGTAGATGATTTattCCAAGAAACTTCATTGCGCAGAAGTTCAAGGTTACACACGAAAAGCCAACGTTCCAATAGTTGGAGTTGTAGTTCGTGTTTCGATGTTTTCTCTTCGTTGGTGGAATacaaagaacataaaaaatttcataaaactgTTGCGGCTATTGCATTCAAACGCGAAGATGATATTTCCCACAAGAAAGATAATAAACCTAAGCGCAAAAATGATGAATCTCCTGAAGACTCTGTTCAAAGTTCGGACATTTCGAGTGAATCTAAATCAGAATCCGAATATGAAGCAATTGAAAGTGATGGTGCGTCAAGCAGTTATTCTGACGTATCGTGGAGTGAGAAACAAAcaactttaaacaaaaagaaaacgggGTCACAAAACTTAAACCTATCAAAAAATCAGCTAGAATCTAATCAAGCAAGTGAAGTAATAGATAATAAGGTTACAACAAATCAAATCAGTTCAAATAATCAAGAATTATTCTCTTTgaacaaagaaaaagtaacaaaTTCAAAGGTTTCTGGCAGAACTTCAGCCCTAAATAACGATATAGAAGCCAACGGATCACTAGATTCCACTGAGTCACGTAATAACGTGGTTAAATTTACGGCGAGTACTGACGACCATTTTCGATGTGACCAAGAGGATCAAATGGAATTAGAACATCCGGTAGATGATTTGTATGATCAATCGAATTCGATCAACTCAAACAATCAAAAATCACCTTGTGCCAATGAAAAACAATCAATAAAATCAAAGCGATGTGAGGGAATATGTTTCTTctgtaatataaaatttaaattggccATTGAGTTAAGAGATCACTTGAAATCAGTACATGGCAAAGACGGGCCATTTAAATGCGCCTCCTGTCCGAAAGAGTATACTACTTATAGATCCCTCTACAAACATTTTGCTTTTCGTCACGAtgCTATTGCTATTAAACGTGAAGAAGATATTTCGCATAAGAAAGATGATAATCCTAAGCGCAAAACTGATGAATCTCCTGAAGACTCTGCTCAAAGTTCGGACATTTCAAGTGAATCTGAATCAGAATCCGAATATGAAGCAATTGAAAGTGATGGTGCGTCAAGCAGTTATTCGGACGTATCGTGGAGTGAGAAACAAAcaactttaaacaaaataaagacaGGGTCACAAAATTTAAGCTTATCAAAAAATCAGTTAGAAGAATCAAATCAAGCAAGTGAAGTAATAGATAATAAGGTTACAACTCAAATCAGTTTAAATAATCAAGAATTATCCGTATCCTCTTTGGACAAAGAAAAAGTAGCAAATTCAAAGGTTTCTGGCAGGACTTCAGCCCTAAATAACGATATAGAAGCCAACGGATCACTAGATTCCACTGAGTCACGTAATAACGTGATAACAATGGTTGCGACTACTGATGACCCTTTTCGATGTGAACAAGAGGATCAAATGGAATTAGAACATCCGGTAGATGATTTGTATGATCAATCGAATTCGATCAACTCAAACAATCAAAAATCACCTTGcgcaaatgaaaaagaattagGAAAATCAAAGCGATATGAGGGAATATGTTCCTTCTGTAATATGCAATTTAAAACGGCCGTTAAGTTAAGAAATCACTTGAAATCAGTACATGGCAATGACGGGCCATTTAAATGCGCTTCCTGTCCGAAAGAGTATACTACTTATAGATCCCTCTACCACCATTTTGCTATTCGTCACGAtggtaaaaagtttaaatgtaACTTGTGTCGAAAAGGTTTCGATTCCCAAGATGAAGTCATTTGTCACAAGAAATTGCATCATCGAATCTACTGTgatatttgcaaaaaatattatatcgCCTCGCCCAAGGGGCATAATAAATTACACGAAGGCGAAATCAAATGCACAATATTTCAACACAGCGAAATTTTCGCCGTATCATCCTCTCCGTCCTGCTCCAACTGGAAAGACAATACTCCGTTTGTCATCAATTTCGGCATAGTGGAACAACGGCTAATGCAAGGCAGTTTGGACGACCACGAACAGGACGCTCAATTGAAAATATCCGGCGTGCAAAAGCAAGCATTGCAGAAGATCCAAGAACTTCAACAGAGAGACGCGCCACACAATTGGGCATGTCTCGGACGTCCCTGA
Protein Sequence: MCGPFKFVRDVKDDKRGRRFFIDHVHMQHMSTSLQSRGSEEPRVQCRSGRLRVLLDDPLSNDYDQETSQSGTQMIYECEICTQMFARKNEFLRHHVSEIDNTFNCCRCHVSFYNTNDLYEHYEVHKNDPIVMSENEFDCTENIEAVMNIPNEESINDSSSNELLYILDDSQCVNEVVIDEVSELTNIKQENKNDEDSYTLVQFEHGYVLPKLLDSKQKQTKKTRKQQGPFVTVKPEKGGKNETSVLIKRATGTQTKSRLLQPKRRHEMPDFSASSYIILNPNDEVDIPLLKCLRCEQLFINKFVFFRHVEKGKCFVNSCDVCTATFNKNSEFYNHYIVEHTDRAICNYCFRTFMYEKNVKEHMLRHLDQFRHRCEECSKGFYTIREYRNHYKNRHMGIRHQCEVCSRSFADEYYFKRHVATHVKTLHKLQENSLRRSLRLSVRNQNARSVVNEISSTWSCSSCFDAFSSLAEYKQHKKFHKTVAAIAIKREEGISHKKDNPKYKNDESPDDFAQSSDISSESESESEYEATESDGVSSSYSDVSWSEKQTTLHKKKTGSENFNLSKNQLESNQASEVIDNKVTTTHISSNNQELASLNREKVTNSKVFGRTSALNNDIEANGSVDSTELRNNVITLAAITDDHFRCDQEDQIELEHPLRDHLKSVHGKDGPFKCASCPKEYTTYRSLYYHVAYRHDGKKFKCWDCRKGFDSKEEVIYHKKLHHQTYCDICKKYYITSPKKHNQFHEGEIKCTVCNKTYKGKESFGKHMRQVHGVAKFQETSLRRSSRLRTKSQPSNSWSCSSCFDIFSSLAEYKEHKKFHKTVAAIAIKREEDISHKKDNNPKRKNDESPEDFAQSSDISSESESESEYEAIESDGVSSSYSDVSWSEKQTNSHKKKTGSQYLNIAKNHLESNQASEVIDNKVTTTQIISNNQEISSVNKEKVTNSKVSGRTSALKNDIEANGSVDSTELRNNVITLAASTDDHFRCDQEGQNELEHPVDYLYDQSNSINSNKQKSPCANEKKSIKSKRYEGICSFCNIKFKLSIELRDHLKSVHGEDGPFKCASCPKEYATYRSLYKHFAIRHDESEYEAIESDGVSSSYSDVSWSEKQTNLHKKKTGSQYLNISKNHLESNQASEVIDNKVTTTQIISNNQEISSKNKEKVTNSKISGRTSALNNDIEANGSVDSTDLRNNVITLAASTDDHFRCDQEGQNELEHPVDYLFQETSLRRSSRLRTKRQPSNSWSCTSCFDVFSSLVEYKEHKKFHKTVAAIAFKREDDISHKKDNKPKSKNYESPEDSVQSSDNSSESESESEYEAIESDGASSSYSDVSWSEKQTTLNKKKTRSQNLNLPKNQLELNQASKIIDNQVTTNQISSNNQELFSLNKEKVTNSKVSSRTSALNNDIEANGSLDSTESRNNVITMVATIDDPFRCDQEDQMELEHPVDDLFQETSLRRSSRLHTKSQRSNSWSCSSCFDVFSSLVEYKEHKKFHKTVAAIAFKREDDISHKKDNKPKRKNDESPEDSVQSSDISSESKSESEYEAIESDGASSSYSDVSWSEKQTTLNKKKTGSQNLNLSKNQLESNQASEVIDNKVTTNQISSNNQELFSLNKEKVTNSKVSGRTSALNNDIEANGSLDSTESRNNVVKFTASTDDHFRCDQEDQMELEHPVDDLYDQSNSINSNNQKSPCANEKQSIKSKRCEGICFFCNIKFKLAIELRDHLKSVHGKDGPFKCASCPKEYTTYRSLYKHFAFRHDAIAIKREEDISHKKDDNPKRKTDESPEDSAQSSDISSESESESEYEAIESDGASSSYSDVSWSEKQTTLNKIKTGSQNLSLSKNQLEESNQASEVIDNKVTTQISLNNQELSVSSLDKEKVANSKVSGRTSALNNDIEANGSLDSTESRNNVITMVATTDDPFRCEQEDQMELEHPVDDLYDQSNSINSNNQKSPCANEKELGKSKRYEGICSFCNMQFKTAVKLRNHLKSVHGNDGPFKCASCPKEYTTYRSLYHHFAIRHDGKKFKCNLCRKGFDSQDEVICHKKLHHRIYCDICKKYYIASPKGHNKLHEGEIKCTIFQHSEIFAVSSSPSCSNWKDNTPFVINFGIVEQRLMQGSLDDHEQDAQLKISGVQKQALQKIQELQQRDAPHNWACLGRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -