Amal007826.1
Basic Information
- Insect
- Agrilus mali
- Gene Symbol
- ZFHX3
- Assembly
- GCA_029378335.1
- Location
- CM055656.1:9500878-9514120[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.7 69 5.2 0.3 2 23 191 213 190 213 0.94 2 17 0.00035 0.034 15.6 1.8 2 23 357 379 356 379 0.95 3 17 8.6e-05 0.0084 17.5 0.7 1 23 411 435 411 435 0.92 4 17 0.013 1.2 10.7 0.4 1 22 477 498 477 501 0.91 5 17 1.4 1.4e+02 4.3 0.6 1 23 749 773 749 773 0.90 6 17 3.4 3.3e+02 3.1 0.1 2 23 859 881 858 881 0.86 7 17 0.22 21 6.8 0.5 1 23 893 916 893 916 0.95 8 17 6.8 6.7e+02 2.1 4.5 2 21 1002 1021 1002 1025 0.88 9 17 0.06 5.9 8.6 1.5 1 23 1037 1062 1037 1062 0.93 10 17 0.0059 0.58 11.7 1.6 1 23 1080 1102 1080 1102 0.97 11 17 0.0034 0.34 12.5 0.5 2 23 1109 1131 1108 1131 0.94 12 17 0.0016 0.16 13.5 3.2 1 23 1238 1262 1238 1262 0.92 13 17 0.01 0.98 11.0 0.6 1 22 1282 1303 1282 1306 0.89 14 17 0.0014 0.14 13.7 0.2 1 23 1356 1380 1356 1380 0.93 15 17 0.081 7.9 8.2 0.8 2 21 1448 1467 1447 1468 0.94 16 17 0.59 58 5.4 2.5 2 19 1611 1628 1610 1633 0.90 17 17 0.00021 0.021 16.3 2.5 1 23 2195 2217 2195 2217 0.99
Sequence Information
- Coding Sequence
- ATGCCCACTTTGTCCGCGGCGCCTGAGCTCAGTCCCGCCGGCGGCCGCACCGAGCAGCGGCAAAAGGTCATCGCCACATCCACCGCCACATCGACCATCGCCAGCGTTTCGACGACGGCCCCGTCGGcttcgtcgtcgtcgtcggaGATAAGaaccgccgccgccgccgcaaCAATGAGCCCAGAGCAGGAAGCCAGTCCACCGCCCGCGGCACCTGGTGCATCGCCGTCGCCTCCGCCTTCTACCACCTTGCCTTCGCCTGCCATATCGCAATCACAAGAGGAACAACACGGAGGCGGAAATTCGGATGTAGAGCAATTCTCGGGAAAAATCGTTTACAATCCTGACGGTTCGGCTTATATTATCGAAGATTCTGAAAGCGAGAGCGAGACCGCTTCCGTTAACGTTCCCGAGGTGGTTCCGCCGCTCCAGGCTGTTTACGTGTCGCGTCTTCTCCGACAGGCCACAAGACAACCGGCCGAACAACCGGCAGTGCACAGTTACCGAGTGATAGCATTCAGAGACGCACGACCTCCCAGGCCGACATCCGTACCTGTCAAGCCGATCCTAATGTGTTTCGTGTGCAAACTGAGTTTTGGGTTCGCGCGTTCCTTTGCCAACCACGCGCAATCCGAACACGGCGTCCATCTTCAGGACTCAGAACGCGAAATTTTATCTGCCGACTGTTCTGCGATCCTCCAGTGCGTCGGTGCTGATAAGAAGCCTATCGTTTCGCTATTAGAACCGTTCGGAACATCGTCCTCGCAACAGGTTTCCGATAATCATATGTGTTCAGTTCCTGTTCCCGTGTCACGTTCCGAACAAATGTCGCCCTCGTCGGAGATAACGCCTGTGTCGTCACGTAATACACCGGGGAAGTCTCCGTCACCGCCCTTCGCTCCGCCGCCCGCGTTTCTCTCCGGAACGACGATAGGAGTCTGTCCGGAACATTTGCAGGGACGACCTTCTGGCGTCGACTGTCCACGTTGTGAAATGATATTGGCATCGGGTCGGTTAGGACCAGCCGGTTTGGGCAATGTGCACAGCCGGAACTCTTGTAAAACGCTCAAGTGTCCAAAATGCAACTGGCATTATAAATACCAAGAGACACTGGAGATTCATATGAAAGAAAAACACCCTGAGACTGAAACTAGTTGTATTTACTGCATAGCGGGTCAGCCGCATCCCCGACTAGCTCGGGGTGAGACCTATACTTGCGGCTACAAACCGTACCGCTGtgaagtttgtaattattccACCACAACCAAAGGTAACCTTAGTATTCATATGCAGTCAGATAAACATTTGAATAACATGCAAGAACTGCAAAACGGGGGTGCGCCCAATACTGAATCACGGCAAGCTTCGCCGAAAGCACCCTCGTTGCACCACTCTCCTGTTAGTAGTGGTCATAAACCTAAACCTAGTTTTCGCTGTGATGTTTGCAACTACGAAACGAACGTTGCACGCAACCTAAGAATACACATGACGTCAGAGAAACATACGCACAACATGTTAGTACTACAACAAAACGTCAAACATATGCAAACGTTATCTGCTATCCATCATCAGCAGCAATCTCAACATATGGAAAATCTTTATGGCATCTATCCTGGTTTGGGGGATAAACCGGAAGCTGCCTTAGCTGATATGGCATACAATCAAGCTCTGCTGATTCAAATGATGACGGGAGGTCAACTTCCCGGTCACGCCGGACCAGCAGATATGACTTCTCACTCGGACCTCGGTTTAAATCCAGAAACGATGGAGCCACCTCCGGAACCAGCGGAGTTGGATCCACAAAAAACCTTCCACTGCTGCGTCTGTAACATATTCAGTACGGACAGTCTGGAGGACTTGGGTAGACATCTGGCCCAGGATCGTACCAGACTTAGAGAACAAGAAATCCTAGCTGTGATCGCCGGTCATTACGTGTGTAAACTTTGCACGTACAAAACCAATCTCAAAGCCAATTTCCAATTACACTGTAAGACTGATAAGCACCTGCAGAGACTGCAACACGTCAACCACGTGAAAGAGGGCGGTCTCCGTAACGAGTGGAAGCTGAAATATGCATCGGCTCCTGGTGGTGTCCAGATCCGGTGCAACGCCTGTGATTATTACACGAATTCCGCGCATAAGTTACAACTCCATTCGGCGGGTAGTCGACACGAAGCGGGGGTCGCGCTTTTGCGATTCCTAGAAGAACGTAGTTCTCCGTTGCGTCCCGATCAACCGCGTGTTTTTCATTGTAATCTGTGCGGCTTTTCCGCGGCTAATCGTCTACCGCTGCTCCAGCACATCAAGTCTCTAAAGCACCTTCATTTGGAGCAACTGCACCAGATTCAGAGGCGGGCGGAGGGCAAGGACGCGCCTGCTGAAATGTCGGAAGTATTTCAAGTAGTTCCTGCGCCGTTTGAACAACGGCAACAACGTACTCCCGAACGAAGAGATAGTACGAATTCCTCGGACTTAAAACAAGAACAATCAAACGAATCACTAAAAACTGAGCCGTTGGAAGATGTCGAAGAATTAAACGCGAGTCAAACGACAGAATCGGACTCGCCGGTACAGATGTGTCCTTATTGCAATTATACGAGCGATTCGGAAATGCGAATACAGGCTCATATAATAGCGCAACATAGCGAAAATAGTTCCTCATCGGAAGTGGTTGTTTACCACTGTCCACTTTGCCAAGACCAATTTAAAGATCGTCCCGTTTTGGAAAGACACGTAATGCAAATTCATTCTGTAAACAGCGAGGGTCTCCAGAGACTTTTAATGTTAGTGGACCAGAGTCATTGGCTCAATCAAGTCTCGCGGACATCCACGCCTAACCAAACCGGAAATAACCAAATACAAACTCCTCCGAATCAAATGATCTCACCGAATTCAGTCGCATCAAAAGACTcgaataaattagataaaagtGACGTCAATATGGATGACGTACAAGAAATTTTATCACCTAACAGTGACGAAAATACTGATCCAGAAGTCGAGAAGTGTGGAACATGTTCtaagaatttcaaaaacatcGACGAACTCTGCTGTCATCAAAACGAAACGGGTCATTTAGAAATCAAGCAGACCCCAAGTGGACCGGGTTATATGTGCTGGAAGAAGGGCTGCAACCAGTTTTTTCCAACCGCCCATACGTTACAAATGCACTTCAGGGAAGTTCACGCAAAAAATTCCATCACGCAAATGTCAGTATCAGAGAAACACGTGTATAAGTATCGATGCAATCAGTGCTCGCTTGCGTTCAAAACCttagaaaaattacaattacattcGCAATATCATCTTATACGGGACGCAACCAAGTGCGTATTGTGCGGGCGCAGTTTTCGATCGGTTGTCGCATTACATAAACATGTCGAAAGTGTCCATTCTGAATTAACGGACGAGGAATTGATCGCATACAAGCAGAGCTTGATGAATAATCCGCTTCTTTTGGCGGGTTTGCAGGGCCAGGTGCTAGACAGCTCGACCAACGACATCCTGCGAAAAGAATCGCTTCGTAACGACGAAATCGAACCTCTAGATTGCGACGATAGCAAAGAATTGAACACCAGCCAGGAAGACAATAACCAGAACGACGGCGAAAATTCGGACGACAGCATCGTGTACAAAGACCAACAATTCTTGGAAGATTACCTGAATAGTCAGGCGATGGCGGAGGACAGTTACAATGACCCTAACAGAAAGTACAAATGCCACCGGTGCAAGGTGGCCTTCACCAGGCAAAATTATTTGACCGCCCATAATAAAACCCTTTTACACCGCAAAGGTGAGAAACTAAGCTACCCCATGGAGAAATACCTGGACCCCAACCGGCCATACAAGTGCGACGTATGTAAAGAAAGTTTCACGCAGAAAAATATACTGCTCGTACATTACAATTCGGTAAGCCATTTGCACAAACTAAAACGAGCCATGCAAGAACAACAGCAacagaataataataacaatcaaCCAGTCAGTCCTATCATTAGTAGTCAAACGCAAAATTTATCCTTGACACCCAAAAGTACGTCCTCAGACGAAGACGATAAAAAAAGGTACAAATGTAACATATGCAAAGTGGCTTACACGCAAGGCAGTACTTTGGATATACACATGCGTAGTGTCTTGCACCAGACCAGAGCAAGTAAATTACAAGATCTGGCATTATCAGGTCAAATTGACCTGTCTAAACCGTTAATAGAACAACCCGAAGCCATGCAGTCTCCGCACCAGACCAGTCCTGCACCCTGTATCGGTGGTGGTGGGGAAAAATTATCTCCTACCCCTCCGTCACCTGGCACAGGTagccaacaacaacaacagggGATGATGAGCTGTTCAAAATGCGGTGCATTATTCGCGTCGACCGACCAGTTGTGTACGCATCAACAACAGTGCTGCATCAACACGTTTGCTGCACCCATGGCTATCTTTCAAGCGACACAAGAGCCGGGGCAGGCCAAAAGTCCTCCGCCGCCGTCGATGTCTACCGAAGGACAGCAACAATTGCAGCAACAACAAGAATTACTAAATAGACTGAATTTACCGAAAAAATCGGGGTCGTATATGTACAAGCAGCTGCTGGAAAGTTTCGGTTTCGATTTGGTCATGCAATACAATGAGAGTCATCAGCGTCGTCAGCGTCAGTTAAATGAAGAGAAACAGTTGTTGTCCAGCGGCAGTTGCACAAGTCCGCCGTCATCTTCGACGATCCACGGTGACGTTGTAGCGATCGAGCCAGCAGTGGCAGCAGGAGTCAAGTCCGAGGAGGAACCTTCAACCGATAACAACGCCAGCAGCCTGCCAGAAGTAAGTAGATCTACGTGCCAACATTGCAATAAAGAATTCTCTAGTGTTTGGGTGTTAAAGTCTCACTGTGAAGAAGTACATAAAGATTTAGTGCCGCTAGAATTCTTAGAAAAGTATGCTCAACAGTTCAAAACCGAATACGAAAAGAAATCTGTGGTCGTGACCGCTGCAACCTCGTCTACTACCCATGTGCCTACCACCACGTCCATCGGCGGCGAAGATCCCGACCCCGAAAAAGATGGGGATGACAACAACAAAGAATCCACGACCACGACATCCACGATGCCGTCGACCGAAGCGGGCGCCGTTACCACAACAGCACCATCGACGCCTACGTCTTCGACGACGCCGTCGGCCAGTAGCACCGACTCGGCGTCGGTCCCGTCCAACATACAAGCGATCATTGCTCAAAGTATGGCCCAAAATCCTATGGCACTTGCACAACAAATGTCCGAGATGCAGGCGGCTTTGAACGTGATGCAATTGCAACAACAGTTGAACTTTAACCCAATGATGCAGATGATGGGAATGGGATTGCCGTTAGGACTCAACGCCCTGGCTGCGATGAATTTGCAGCCGCCGTTAGTGCCGTTAATGATGCCGCCGCCTCCTTATGATCCCATATCGCAGTTCGCGCCTCAAGATCAACAGGCAATGCTTGCCAAGCAACAAGTCATGATGCAACAGCAAGTgGCTGTTAGCGCGGCTGCAAATCAAAAGCGTGCAAGAACCCGAATAACCGACGAACAACTGAAAATTCTTCGTTCCCATTTCGACATAAACAATTCACCATCCGAAGAACAAATCCAAGAAATGGCTATCCAAAGTGGCCTGCCACCGAAGGTTATCAAGCATTGGTTTCGAAATACGTTATTTAAAGAACGTCAACGTAACAAAGATAGCCCATACAACTTCAACAATCCACCCTCGACAACTTTGAATCTGGAAGAGTACGAGAAGACTGGGGAAGCCAAAGTTATGCCCTTAAATAGTTCCGGCAGTAGCACAGACGATGGCGGAAAGCAAGATAGTATGCAACAACCTAcccaaataaaaatggaagtCAAAGAAGAACCGGCAGAAGATATTCATAAGTATATGGAAGACAAACATCATCACAGCAACGAATATGAAGACAAAACGCACATTTTTAATCTCCCTCCTCATAGTCAAAGCCCAATTTCATACGTCACTACCTCAGAACCTCATAATTACACCCAAACGTCGAATTCCCAAAACAGTTTCAATTTGACATCTGTTATTGCATCTCAATTTTCCGATGCAATAACCACTACTTCTGTTCCGTTAAGTGTTACTCCTAACACTAGTACATCAACAAGTCCAATGTTACCGCccacaaaaataaatcagCCGAATTTCTCAACTTCAAACAGTTTTCAAAACATCCTTCCACTTTCTGGAAATCGTTGTCTCAGTCCAAACAGGGGCGATTATAATCCTGGCGGCAGCGTTTGTAGTGCAGGAAGTTCCACGGGTAAAAGAGCGAATCGAACCAGATTTACAGACTACCAAATCAAAGTACTCCaagaatttttcgaaaataacgCTTATCCAAAAGACGACGACTTGGAATACTTGTCGAAACTTTTGAACTTAAGTCCGAGAGTGATTGTCGTGTGGTTTCAAAATGCCCGTCAAAAGGCCAGAAAAGTATACGAAAACCAACCAGCAATTGAACCCGCTCCTGGCATAACAACAGACGAGGCTGGTGCAAACCGTTTCCAACGAACACCAGGATTAAATTACCAGTGCAAAAAATGCCTTTTAGTATTCCAAAGATATTACGAATTAATAAGACACCAGAAGACCCACTGCTTCAAGGAGGAAGATGCCAAAAGATCTGCTCAAGCTCAAGCGGCGGCTGCTCAAATTGCTGCAGTCTTGAGTTCTGAAGATTCAAACTCAAGCACTATTGTTGAACaatctcaacaacaacaacagcagcagcagcaacagCAGAAACcccacaacaacaacaacaacaaactcCGCCACAACCGCAACAACAGCAACAGAGCCAGCAGCAACCTTCCCTTCCAATGA
- Protein Sequence
- MPTLSAAPELSPAGGRTEQRQKVIATSTATSTIASVSTTAPSASSSSSEIRTAAAAATMSPEQEASPPPAAPGASPSPPPSTTLPSPAISQSQEEQHGGGNSDVEQFSGKIVYNPDGSAYIIEDSESESETASVNVPEVVPPLQAVYVSRLLRQATRQPAEQPAVHSYRVIAFRDARPPRPTSVPVKPILMCFVCKLSFGFARSFANHAQSEHGVHLQDSEREILSADCSAILQCVGADKKPIVSLLEPFGTSSSQQVSDNHMCSVPVPVSRSEQMSPSSEITPVSSRNTPGKSPSPPFAPPPAFLSGTTIGVCPEHLQGRPSGVDCPRCEMILASGRLGPAGLGNVHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPETETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQNGGAPNTESRQASPKAPSLHHSPVSSGHKPKPSFRCDVCNYETNVARNLRIHMTSEKHTHNMLVLQQNVKHMQTLSAIHHQQQSQHMENLYGIYPGLGDKPEAALADMAYNQALLIQMMTGGQLPGHAGPADMTSHSDLGLNPETMEPPPEPAELDPQKTFHCCVCNIFSTDSLEDLGRHLAQDRTRLREQEILAVIAGHYVCKLCTYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGLRNEWKLKYASAPGGVQIRCNACDYYTNSAHKLQLHSAGSRHEAGVALLRFLEERSSPLRPDQPRVFHCNLCGFSAANRLPLLQHIKSLKHLHLEQLHQIQRRAEGKDAPAEMSEVFQVVPAPFEQRQQRTPERRDSTNSSDLKQEQSNESLKTEPLEDVEELNASQTTESDSPVQMCPYCNYTSDSEMRIQAHIIAQHSENSSSSEVVVYHCPLCQDQFKDRPVLERHVMQIHSVNSEGLQRLLMLVDQSHWLNQVSRTSTPNQTGNNQIQTPPNQMISPNSVASKDSNKLDKSDVNMDDVQEILSPNSDENTDPEVEKCGTCSKNFKNIDELCCHQNETGHLEIKQTPSGPGYMCWKKGCNQFFPTAHTLQMHFREVHAKNSITQMSVSEKHVYKYRCNQCSLAFKTLEKLQLHSQYHLIRDATKCVLCGRSFRSVVALHKHVESVHSELTDEELIAYKQSLMNNPLLLAGLQGQVLDSSTNDILRKESLRNDEIEPLDCDDSKELNTSQEDNNQNDGENSDDSIVYKDQQFLEDYLNSQAMAEDSYNDPNRKYKCHRCKVAFTRQNYLTAHNKTLLHRKGEKLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQQQNNNNNQPVSPIISSQTQNLSLTPKSTSSDEDDKKRYKCNICKVAYTQGSTLDIHMRSVLHQTRASKLQDLALSGQIDLSKPLIEQPEAMQSPHQTSPAPCIGGGGEKLSPTPPSPGTGSQQQQQGMMSCSKCGALFASTDQLCTHQQQCCINTFAAPMAIFQATQEPGQAKSPPPPSMSTEGQQQLQQQQELLNRLNLPKKSGSYMYKQLLESFGFDLVMQYNESHQRRQRQLNEEKQLLSSGSCTSPPSSSTIHGDVVAIEPAVAAGVKSEEEPSTDNNASSLPEVSRSTCQHCNKEFSSVWVLKSHCEEVHKDLVPLEFLEKYAQQFKTEYEKKSVVVTAATSSTTHVPTTTSIGGEDPDPEKDGDDNNKESTTTTSTMPSTEAGAVTTTAPSTPTSSTTPSASSTDSASVPSNIQAIIAQSMAQNPMALAQQMSEMQAALNVMQLQQQLNFNPMMQMMGMGLPLGLNALAAMNLQPPLVPLMMPPPPYDPISQFAPQDQQAMLAKQQVMMQQQVAVSAAANQKRARTRITDEQLKILRSHFDINNSPSEEQIQEMAIQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVMPLNSSGSSTDDGGKQDSMQQPTQIKMEVKEEPAEDIHKYMEDKHHHSNEYEDKTHIFNLPPHSQSPISYVTTSEPHNYTQTSNSQNSFNLTSVIASQFSDAITTTSVPLSVTPNTSTSTSPMLPPTKINQPNFSTSNSFQNILPLSGNRCLSPNRGDYNPGGSVCSAGSSTGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLNLSPRVIVVWFQNARQKARKVYENQPAIEPAPGITTDEAGANRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQIAAVLSSEDSNSSTIVEQSQQQQQQQQQQQKPHNNNNNKLRHNRNNSNRASSNLPFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00031617;
- 90% Identity
- iTF_00031617;
- 80% Identity
- iTF_00031617;