Amal033533.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrilus mali
Gene Symbol
-
Assembly
GCA_029378335.1
Location
JAQSLM010000360.1:1262-3880[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-11 7.8e-09 36.1 0.0 3 38 10 46 9 49 0.93

Sequence Information

Coding Sequence
ATGCCTAAGAAGAACAAATATAATGTGGAATCAATGGAATCCGCAATTAATGATGTCATGAACAATAATATGTCATACAGAAATGCGGCAGACAAATACGGGGTGCCCAAGTCAACACtggaattcaaaataaaaaatcctgGTCATAAAGACACATGCGGCCCATCTCCGATCCTTTCTTTGAGAGAAGAGTCTGAACTTGTAAGgtGGATAGAAGGGCTGGCGTCAAAAGGATTTCCCAGGAAAAAAGATGACATTTTGAACAGCGTCCAGAAATTTTTGACTGATAACCCACGGCCTAATCCATTTAAGAACAACAGACCTGGTGACAGTTGGCTAAAGGCTTTCTTAAGAAGACACCCAACAATTGTGCAGAGAACGAGCGAATCGTTAAGTGCTGCCAGCGCCTGTGTCTCAGAGTCGGACATACGGAAATGGTTTAGAGATATAAACAATTATCTTGTTTCCAAAAACTTAAACATTCATGACCCTTCGCGAATTTACAACGGAGATGAATCTGGATTTCAGATTTGCCCAGAAACAGGCAAAGTCTTTGCTGGGAAAGGCGCGAAGAATGTTTATTCTATGGAAAAGGGGTcaactaaagaaaatattaccgTAATGTTCTCGTTTTCTGCTTCTGGATTAACCTGCCCACCTATGATCATTTATCCTTATAAGCGAATTCCGGAAAAAATAACTATGTCTGTTAATCCTGATTGGGGAATTGGGCGTTCTGATAATGGTTGGATGACTTCGGAGACATTTTTTGATTAtgtgaaaaatatattccatCCGTTTTTGATTGAAAAGAATATACAGTTTCctgttatattatatttagatGGCCATAAATCTCATTTAACGTATGAGTTGAGTCTTCTTTGCAACGAACTAAACATTGAGGTCATCGCCTTATACCCAAATGCCACCAGAATTCTCCAACCATGTGATGTAGCGGTTTTCAGACCTATAAAAATGGGTTGGAAAAAGGCCGTGAGGgaattttatgaacaaaatcCTGGtcaagttttaaataaaattacttttgctCCCCTTTTGGAAAAAGTAGTCAAGAACAATATTAAAGCAGATACCCTTACTCATGGATTCCGTGCGTGTGGTTTATTCCCCTTCAATCCAGATGCTGTTGACTACACAAAGTGTTTGGGAAAGGAAAATAAACCCACCGATGAGGTCAAAATGCATCCCCGTATGAATCACAATACATTTGTCAGtttggctggagaagatttaataaatagattCAAATTATTCGATGAACTCTTGATTAACGAGGGTATTACCCATGAGTTTTTGACGTTATACAACATATGGAATTATTTTGACAAACCAGATTCATTGCCAGGTGAGAATAAAGATGGCGTGGTCATACCAAAAGTTCCAGAATCATTTgataatcaattattaaagtCCGTTTCGGATACTGCATTAAATCCATCTGAGCATCCACCTCAAAACGAATCAAAAGTTCATATCATACAAAATATTGTCATAAAACAACCGAGTACAGTAACTGACTCTAGCTTGCTGCCTACTAGTAAAAGCATTGGTGTCTACTTGCAAGAACCAGAAACACCGGCAAGAAAGAATAAACGTAATATTGAGAGAGTTTCATTTGCTGTTACATCAAGAAATTATCAAgagaattttgaaagaaaacgTGCATTAAAGTTGGaagcagaaaataaaaaattggagaGAAAACAAAAGAGAGAGATGAATGCAGCAGCAAaagccttaaaaaaaaatgcaagcGCTTCTGACCATAACAGGAATTCATGCTTTGCATGCAAAGTTCGtacaataagaaataattaccTAACATGTGACAGCTGCAAAAAAAGGATTCACCGTCGatgtgtcccaaaaaaatatgaagaacATATCCCCGAAGAGGATGATGATGATTTGTTTATGTGTCATGAATGTTATAGGACCGAGGAAAGTGACGAATATGAAGATTTTGAAAGAGAGAGCGAAGAAAGTAGTGAAATCGATCATCGAAAGGGAATCGACATCGAAATAAGTGACGAaccgatagaaaatctcaaACAAATggaaatagtaaataataaaacggaTTCTGAAAACCAAAACATTAAAGGAGAactagaaacaaaatgtgaaaaTGAAAGTAAGGAGATAGAAGGCAATTCTATAAATCTTAAAGATTACGTTGAAAGAACGTcggaaaagaaacaaaaagttgTGATGGAAAGGGTCAAGGAATATAACGTATTAAGCAAGATGGAAACCGAAGCgaaaacaaaagaagaaaaaggaagAAGTAACCAAAATCCTAAAATTGTGATGGATAGCGTACAACAGATATCAGAAACGAAGTTAGATGATGAGATGGAGGTCGATGAGATATTTAATATGTACCACGCTGaggttaaaaaatgtaaatag
Protein Sequence
MPKKNKYNVESMESAINDVMNNNMSYRNAADKYGVPKSTLEFKIKNPGHKDTCGPSPILSLREESELVRWIEGLASKGFPRKKDDILNSVQKFLTDNPRPNPFKNNRPGDSWLKAFLRRHPTIVQRTSESLSAASACVSESDIRKWFRDINNYLVSKNLNIHDPSRIYNGDESGFQICPETGKVFAGKGAKNVYSMEKGSTKENITVMFSFSASGLTCPPMIIYPYKRIPEKITMSVNPDWGIGRSDNGWMTSETFFDYVKNIFHPFLIEKNIQFPVILYLDGHKSHLTYELSLLCNELNIEVIALYPNATRILQPCDVAVFRPIKMGWKKAVREFYEQNPGQVLNKITFAPLLEKVVKNNIKADTLTHGFRACGLFPFNPDAVDYTKCLGKENKPTDEVKMHPRMNHNTFVSLAGEDLINRFKLFDELLINEGITHEFLTLYNIWNYFDKPDSLPGENKDGVVIPKVPESFDNQLLKSVSDTALNPSEHPPQNESKVHIIQNIVIKQPSTVTDSSLLPTSKSIGVYLQEPETPARKNKRNIERVSFAVTSRNYQENFERKRALKLEAENKKLERKQKREMNAAAKALKKNASASDHNRNSCFACKVRTIRNNYLTCDSCKKRIHRRCVPKKYEEHIPEEDDDDLFMCHECYRTEESDEYEDFERESEESSEIDHRKGIDIEISDEPIENLKQMEIVNNKTDSENQNIKGELETKCENESKEIEGNSINLKDYVERTSEKKQKVVMERVKEYNVLSKMETEAKTKEEKGRSNQNPKIVMDSVQQISETKLDDEMEVDEIFNMYHAEVKKCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00031757;
90% Identity
iTF_00031757;
80% Identity
iTF_00031757;