Amal008263.1
Basic Information
- Insect
- Agrilus mali
- Gene Symbol
- clz9
- Assembly
- GCA_029378335.1
- Location
- CM055656.1:12268866-12273823[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-08 2.1e-06 28.4 0.0 2 42 17 58 16 61 0.85 2 2 0.0001 0.02 15.6 0.1 22 38 67 83 64 88 0.84
Sequence Information
- Coding Sequence
- ATGGTCagaaattacaagaaaaaggGAACTAGGTGTGGAGAGATAGACGAACAGGCAATGTTAAAAGCTATCGATgaagttttgaaaaacaaactCTCTTTAAGGAAATCAGCAGCCAAATATGAAGTTAATGCACAGACACTACAAAGccgtataaaaaaaataggggagAGTCTGGAACAGTGGCCATTTAAAGCCGCTGCAATTCGATACGAAATTCCCCGCACAACTTTAAGGcgttatgtaaaaaaagtcAAGGACAAAAGAGATGAAATTGATTGGCACTCACCCGTCTTAGACGGAGCACCAAGATTAGAACCAAATTATACtgtaaatcaaatattttctttggaagaagaagaaatctTAAGCGAATACTTCCAAACCATGGCAAAACTCCATCACGGCTTGAATCCAGCCCATGCAAGAAAGTTAGCGTATGATTTAGCATTGgcaaataagaagaaaatacCACCCTCGTGGGTAGAAAATCAAACTGCCGGTAGATTGTGGTTTAACGCTTTTCTCAAGCGGCAAAGCGAGTTATCCTTAAGATCGGCAGAAGCTACGTCGTTAGGTAGAGCTATGGGCTTCAACAAGCCAGTCGTCCAACGATTTTTTGATAATGTGCACGAAATATATGAAAAGTACAAATTAGGACCCTATCAAGTGTACAACGTGGACGAAACGGGACTTACAACCGTTCAAGAAGCAGGAAAAGTCATTGGCAGAAAAGGTCAAAAACAAGTTGGCCAAATAACATCTAGTGAACGGGGAACTTTGGTCACCATGAATGCTCCCCCCGGAACTGTCGGGGTCGCTTCAACGTCAGGTTGGATAACGTCGGAACTCTTTGTGCAATGGTTTCAACATTTTATTAGACATGCCAAACCCACAGCTGAATCACCGGTATTACTAATCATGGATAACCATGAAGCTCACATTTCTTTGCAAATCATAAAGTTGGCCAAGAAGAATCATGATTTCGATCTTTCTGGGATTTTCCCGTTCAACCCAAACATATTTAACGACGATGACTTCATAGCTTCAACAGTAACAGACAtacaagtaataaataaagacgGTTTGGATGAAAACAACTTGAaacaaacaattgaaaataatgaagTCATGATTGATATGCCATCAACAAGCGCTAGggataaaaattcaattaggAACCAGAAATTGCTCGTTTTACCCACTGACCTTAAACCATTTCCAAAGATAACagcttcgaatgaaaatagaaagtttcagagaaaaaagaaaaaatcagaaattttgaCAAACACCCCAGTTTTGGAAAAACTCGAAGAGGAGGAAAAATGGAAGGAAGCTAGAAAATCcagtttaaacaaaaatttaagtgtaaaaaggCACCTTGGAGATAGCTTAAAACCTTGCAGCAAAgcccaaaaaaaaagtaaactttCTAAAAGTAAACTTTCTGAAAGCAGTTCCTCAAATGATGAGAGCATCGAACAGTTGACAGATTCAGAAGACATTGATGTCTTTGCTCAGTCGGGAGAAGAAGATAATCTTCTAATGAATGATCTTTCAACGATAACTAAAGACTCGTTTGTATTAGTCAAGTTTCCGACgaaaaaaacagttaaatatTATGTTGGTCGCATAATGGATAAGTTAGACAATGAAGAGTTCAATATAACGTTTCTTAGACGCCAtggaaacaattttatatatccAAATGTTCCAGACATATCGACAGTTCCCGCCTATGACATTATTCTTCATTTGACGCAACCTGAAAAAATTGGCGGAACATCAAGAACGGCTAATCTTTTCTCTTTTCCTATCGATTTGTCTTCATACAATgtGGCCACTGTTCCAGACTCTCCCCTACGCAAAACACAAGATCTTGGTAGCGAAAATCGTGTATACGAATCCAAATTTACATCACAGCAAGTTTTTACCAAAACAGAAGAGgtccttttaaataaatatatcctAGCGTGTTCTAAGATGCACTATGGACTGACATGTATCCAAGTTAAAAAACTTGCTTATGAGTTTGCTAAGGCCAACGATATAAAACATCCTGCAAGttggaataataataagatgaCGGGAGCAGACTGGTTAGCAAGTTTCCGAAAACgtcataaaaatttaagtttgcgTAAACCTGAAAACACTAGCGCTGCCAGATCATTCGGTTTCAACAAAACGGCAGTGAATGATTTCTTACAGAACTTGGAGAATATATACCGCAAACATAATTTTACTGCCGATCGGATCTTCAACTACGACGAATCTGGTATTTCTACTGTTTTGAGCACACCAAAAATTTTTGCTGACAAGAGTCAAAAACAGGTTGGTCAAATAGTGTCTGGTGAAAGAGGAGAACTGGTCACATTTGGTGGTATTATTTCAGCAAGTGGAAACACCATACCCCCCTTATTCATCTTCCCTCGAGTACATTATAAGGACCACTTCTTAGAAGGTGCTCCAGAAGGCTCTTTAGGTGTAGCTACGAGAAGTGGTTGGATAAACTCGAGCATTTTTGTTGATGTTTTAAAGCACATCCAGAAACACACCTTATGTTCGAAAGAAAATCCAATATTGCTTTTATGTGACAATCATGAAAGTCACATTTCTATAGATGCAATCAACTACTGCCGTGACAATGGAATTGTGTGCCTTTCCTTTCCACCTCACACAACTCATCGCCTTCAACCATTAGATGTTGGAGTATTTGGACCAttaaagtcaaaattaaaGACAGCATTCAATGACTGGCACGTGTATCATTCAAATCCTGTAACAAATCCAAATGAAACCACTGGTGGTGATGAGCTTGGAATAGCTGGTGATCAACTTGCTACAGTTAGTGTTGAACTTGGTGATGTTCCTGCTCGAACACCACCGACTTTGTCCAGAGATGTTTCGCCTTCACTGCTTTCACAACATCTTGCATCAACAGTGATAGATTTTGATAACCCTGCACCATCTACTTCTAAAGTATTGAAGACACCAGAAATGATAAGGCCTTTCCCTAAAGTTCAAAGACgcacacaaacaaaaaaaggtCGATCACTTGGAAAATCAAGAATTTATACGGACACGCCTGAGAAGACTAGAATTGAagaattggaaaaaaataaagagatGAAGAGACTAGAAAAAGAACGGAAAAATAAAGCAAGAGAAATGAAGAGAGCGTTGAGTTTATTAAATGAAGATTGTCATAAATCAAGTaaaccaaaaagaaataaaaccaaaGAGATTGAAACAATTAGTAGCGACAGTGAAACAAATATAAGCCTAAGAGAAAGTTCTGCTTCACCTTTCGACGTGCTTGAAGAAAACGAAGATGAATATGATTATGAAGAGCCTGTTGACCCTGAAAATATCAAGAACGGTGCCTATGTGcttgtaaaatttgaaaaaaagaagTCTGTTATTTACTATGTCGGACAAATCATCAAACACTACAGTTTTACAGAAGTACTGGTTTCATTTTTGAGGAAAAAACTAGGATCTTCGATGAAATTTGTATTTCCAGACGTCAAAGATGAAGGATCAGTACATCTATCAGATATAGTTTTGATATTACCGGATCCTACATCAGCTAAAACAGCTAGGACTGCtggtattttaagttttaacaaAGATCTCTCTTTTTATAACGTCCATTAA
- Protein Sequence
- MVRNYKKKGTRCGEIDEQAMLKAIDEVLKNKLSLRKSAAKYEVNAQTLQSRIKKIGESLEQWPFKAAAIRYEIPRTTLRRYVKKVKDKRDEIDWHSPVLDGAPRLEPNYTVNQIFSLEEEEILSEYFQTMAKLHHGLNPAHARKLAYDLALANKKKIPPSWVENQTAGRLWFNAFLKRQSELSLRSAEATSLGRAMGFNKPVVQRFFDNVHEIYEKYKLGPYQVYNVDETGLTTVQEAGKVIGRKGQKQVGQITSSERGTLVTMNAPPGTVGVASTSGWITSELFVQWFQHFIRHAKPTAESPVLLIMDNHEAHISLQIIKLAKKNHDFDLSGIFPFNPNIFNDDDFIASTVTDIQVINKDGLDENNLKQTIENNEVMIDMPSTSARDKNSIRNQKLLVLPTDLKPFPKITASNENRKFQRKKKKSEILTNTPVLEKLEEEEKWKEARKSSLNKNLSVKRHLGDSLKPCSKAQKKSKLSKSKLSESSSSNDESIEQLTDSEDIDVFAQSGEEDNLLMNDLSTITKDSFVLVKFPTKKTVKYYVGRIMDKLDNEEFNITFLRRHGNNFIYPNVPDISTVPAYDIILHLTQPEKIGGTSRTANLFSFPIDLSSYNVATVPDSPLRKTQDLGSENRVYESKFTSQQVFTKTEEVLLNKYILACSKMHYGLTCIQVKKLAYEFAKANDIKHPASWNNNKMTGADWLASFRKRHKNLSLRKPENTSAARSFGFNKTAVNDFLQNLENIYRKHNFTADRIFNYDESGISTVLSTPKIFADKSQKQVGQIVSGERGELVTFGGIISASGNTIPPLFIFPRVHYKDHFLEGAPEGSLGVATRSGWINSSIFVDVLKHIQKHTLCSKENPILLLCDNHESHISIDAINYCRDNGIVCLSFPPHTTHRLQPLDVGVFGPLKSKLKTAFNDWHVYHSNPVTNPNETTGGDELGIAGDQLATVSVELGDVPARTPPTLSRDVSPSLLSQHLASTVIDFDNPAPSTSKVLKTPEMIRPFPKVQRRTQTKKGRSLGKSRIYTDTPEKTRIEELEKNKEMKRLEKERKNKAREMKRALSLLNEDCHKSSKPKRNKTKEIETISSDSETNISLRESSASPFDVLEENEDEYDYEEPVDPENIKNGAYVLVKFEKKKSVIYYVGQIIKHYSFTEVLVSFLRKKLGSSMKFVFPDVKDEGSVHLSDIVLILPDPTSAKTARTAGILSFNKDLSFYNVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -