Basic Information

Insect: Agrilus cyanescens
Gene Symbol: Hinfp
Assembly: GCA_947389935.1
Location: OX376705.1:6311046-6313216[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.014 3.4 9.7 0.1 3 23 68 90 66 90 0.90

2 10 0.38 95 5.2 0.2 2 23 102 125 101 125 0.91

3 10 1.2 3e+02 3.6 3.4 3 23 164 186 162 186 0.92

4 10 0.0083 2 10.4 1.1 2 23 201 224 200 224 0.94

5 10 0.054 13 7.9 0.6 3 21 232 250 231 251 0.94

6 10 2.3e-06 0.00058 21.6 1.0 1 23 260 282 260 282 0.99

7 10 1.1e-05 0.0026 19.5 1.1 1 23 286 309 286 309 0.96

8 10 0.0011 0.27 13.2 1.0 3 23 317 337 316 337 0.97

9 10 0.0012 0.3 13.1 2.2 1 23 343 366 343 366 0.96

10 10 0.00042 0.1 14.5 7.7 1 23 374 397 374 397 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.014	3.4	9.7	0.1	3	23	68	90	66	90	0.90
2	10	0.38	95	5.2	0.2	2	23	102	125	101	125	0.91
3	10	1.2	3e+02	3.6	3.4	3	23	164	186	162	186	0.92
4	10	0.0083	2	10.4	1.1	2	23	201	224	200	224	0.94
5	10	0.054	13	7.9	0.6	3	21	232	250	231	251	0.94
6	10	2.3e-06	0.00058	21.6	1.0	1	23	260	282	260	282	0.99
7	10	1.1e-05	0.0026	19.5	1.1	1	23	286	309	286	309	0.96
8	10	0.0011	0.27	13.2	1.0	3	23	317	337	316	337	0.97
9	10	0.0012	0.3	13.1	2.2	1	23	343	366	343	366	0.96
10	10	0.00042	0.1	14.5	7.7	1	23	374	397	374	397	0.97

Sequence Information

Coding Sequence: ATGGCTGAGGTTAAAAGTTATCCAAATAGATTAGCAGTGTTTGAGCATGTTCCACAAAAGAAAAGTTCATCTTCAAAGAGATTTGGCAGGACAGCATCTTCACTTAGTGATTCTGATTCAGATACACAAACAGATATTATTAAGACAACTAGGAAGAGACATAAAGGTGTTAGACATAATAAGGAACCATTAAGTTTAATGTGTATGTGGTTGGGATGCCCTAAAGTAACAGAATATTATGATGAATTTATTAAACATATCTCCACACATGTAGCTGCTGATGAGTCGGACGATTCTTCCCTCGAATGTCAATGGAGTAACTGTAGATTTACAACAAACACAGCATCTTTACTGGATCAACACATAGTTTATCACGGTTACATAATGAAGTTAAAAAATATTGGACAGAACGTTTTGAAGCGTTTTAACCTACCAGACTGCACCCAAACTCCTGAAGGGAATTTGCCTTTATTTGTGGGAGGATTTTTATGTGAATGGAAACATTGCAAAGGGGTTTTTGGGAACGTTTTTCACTTTTACAATCACATAAAACAACACGTCAACAGTTTCCCGACTTATTATTCTAAAAAGGAAGTAATTGAATGCCAGTGGCTGGGGTGTTCATTTAAATGTTCTTCGCAATACAAACTCGCCGATCATCTACGCTCACATACCAAAGAAAAAATGGTAGCATGTCCCACTTGTGAATCTACATTTGCCACTAAAACTAAATTTTACGATCACAGAAAGAGACAGTTACCAGTGGAAGAACAAAGTTATCAATGTTCACAATGTACAAAAATGTTCCCTAGCGAAAGACTTCTCAAAGATCACATCAGGTCACACGTGAATCACTATAAATGTCCCATGTGTGATATGACTTGTCCCAAACCGTCCTCTCTGGCGACTCATATACGTTTTAGGCATTTTTCTGAAAGACCTGTTGCATGTACCCTCTGTGAATACAGATGCGTTAATAAACAAGATTTACTGCAGCACATGTTAGTACATTGTTCAAAAAGCCTTTTTGAATGTGAAGACTGTAACTATTCTTGCCGATCCATGTACGGACTGGATAGACACTATCAGCAAGAACATGATCATCAATGGACTCAAACGTACGAGTGCCACGTTTGCAAAAAGACATTTCATCGCGGGAATCACCTTACCAGACATTTGATAAAAAGACATGGATTTAACTGGCCATCAGGTCACTCGCGATTCAGATATAAAGTGGATCCTGATGGAATTTATCGTTTGCAAACAGTACGTTACGAAAGTCTTGAAGTAACGCGAGAAATAATAAACAACAGTAGTGTGAATAAAATCGAAGCTGATACGAATTACGAATTGAAAAAGTGTGAGGCTGATGTTGATAACATTCCAAAATATGTTGCGGTGAAAGAAAAACCAAAAGAGAACGTTTTATTACCGACCAACAACAGTGTTTTAATAACGATAAATGACGTTGATGAGAGTGGTAACATTTTAAAAAGTGAAATAATCGAGTCCAGTGAAGTTAAGTTTCTCAAATCTGAAATAGATATCAAAACTGTTCCAGAAGAAGAAGAAGAAGAAGAAGAAGCCCCAGTTGCATGTGGACGTGTACTAAGGCCAAGAAAAAAATGA
Protein Sequence: MAEVKSYPNRLAVFEHVPQKKSSSSKRFGRTASSLSDSDSDTQTDIIKTTRKRHKGVRHNKEPLSLMCMWLGCPKVTEYYDEFIKHISTHVAADESDDSSLECQWSNCRFTTNTASLLDQHIVYHGYIMKLKNIGQNVLKRFNLPDCTQTPEGNLPLFVGGFLCEWKHCKGVFGNVFHFYNHIKQHVNSFPTYYSKKEVIECQWLGCSFKCSSQYKLADHLRSHTKEKMVACPTCESTFATKTKFYDHRKRQLPVEEQSYQCSQCTKMFPSERLLKDHIRSHVNHYKCPMCDMTCPKPSSLATHIRFRHFSERPVACTLCEYRCVNKQDLLQHMLVHCSKSLFECEDCNYSCRSMYGLDRHYQQEHDHQWTQTYECHVCKKTFHRGNHLTRHLIKRHGFNWPSGHSRFRYKVDPDGIYRLQTVRYESLEVTREIINNSSVNKIEADTNYELKKCEADVDNIPKYVAVKEKPKENVLLPTNNSVLITINDVDESGNILKSEIIESSEVKFLKSEIDIKTVPEEEEEEEEAPVACGRVLRPRKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00030535;
90% Identity: -
80% Identity: -