Basic Information

Insect: Agrilus cyanescens
Gene Symbol: ZNF236
Assembly: GCA_947389935.1
Location: OX376707.1:13237938-13254662[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00013 0.033 16.1 3.1 1 23 119 141 119 142 0.96

2 25 0.00055 0.13 14.1 0.6 1 23 147 169 147 169 0.98

3 25 0.00023 0.056 15.3 0.6 2 23 175 196 175 196 0.96

4 25 0.00016 0.039 15.8 0.1 1 23 202 224 202 224 0.98

5 25 0.03 7.4 8.7 0.7 2 23 241 262 241 262 0.96

6 25 0.015 3.7 9.6 4.1 1 23 287 309 287 309 0.98

7 25 4.7e-06 0.0012 20.6 0.5 1 23 315 337 315 337 0.97

8 25 0.00055 0.14 14.1 2.1 1 23 343 366 343 366 0.95

9 25 0.018 4.4 9.4 1.5 1 23 376 399 376 399 0.97

10 25 2.9e-06 0.00071 21.3 0.5 1 23 491 513 491 513 0.98

11 25 3.4e-05 0.0085 17.9 2.0 1 23 519 541 519 541 0.99

12 25 0.00078 0.19 13.7 0.4 1 23 547 569 547 569 0.99

13 25 0.023 5.7 9.0 7.2 1 23 654 676 654 676 0.97

14 25 7.3e-05 0.018 16.9 1.7 1 23 682 704 682 704 0.97

15 25 0.0004 0.098 14.6 1.3 1 23 710 732 710 732 0.94

16 25 0.0021 0.52 12.3 3.9 1 23 738 760 738 760 0.98

17 25 0.00061 0.15 14.0 1.8 1 23 766 788 766 788 0.97

18 25 0.016 3.9 9.6 6.7 1 23 1098 1120 1098 1120 0.96

19 25 6.1e-06 0.0015 20.3 1.2 3 23 1128 1148 1127 1148 0.98

20 25 4.3e-05 0.011 17.6 3.2 1 23 1154 1176 1154 1176 0.99

21 25 0.00025 0.062 15.2 1.1 1 23 1184 1206 1184 1206 0.97

22 25 0.0013 0.31 13.0 1.2 1 23 1212 1234 1212 1234 0.98

23 25 0.0015 0.38 12.7 2.7 1 23 1384 1406 1384 1406 0.98

24 25 0.008 2 10.5 1.2 1 23 1411 1433 1411 1433 0.96

25 25 0.027 6.7 8.8 0.5 1 21 1439 1459 1439 1460 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00013	0.033	16.1	3.1	1	23	119	141	119	142	0.96
2	25	0.00055	0.13	14.1	0.6	1	23	147	169	147	169	0.98
3	25	0.00023	0.056	15.3	0.6	2	23	175	196	175	196	0.96
4	25	0.00016	0.039	15.8	0.1	1	23	202	224	202	224	0.98
5	25	0.03	7.4	8.7	0.7	2	23	241	262	241	262	0.96
6	25	0.015	3.7	9.6	4.1	1	23	287	309	287	309	0.98
7	25	4.7e-06	0.0012	20.6	0.5	1	23	315	337	315	337	0.97
8	25	0.00055	0.14	14.1	2.1	1	23	343	366	343	366	0.95
9	25	0.018	4.4	9.4	1.5	1	23	376	399	376	399	0.97
10	25	2.9e-06	0.00071	21.3	0.5	1	23	491	513	491	513	0.98
11	25	3.4e-05	0.0085	17.9	2.0	1	23	519	541	519	541	0.99
12	25	0.00078	0.19	13.7	0.4	1	23	547	569	547	569	0.99
13	25	0.023	5.7	9.0	7.2	1	23	654	676	654	676	0.97
14	25	7.3e-05	0.018	16.9	1.7	1	23	682	704	682	704	0.97
15	25	0.0004	0.098	14.6	1.3	1	23	710	732	710	732	0.94
16	25	0.0021	0.52	12.3	3.9	1	23	738	760	738	760	0.98
17	25	0.00061	0.15	14.0	1.8	1	23	766	788	766	788	0.97
18	25	0.016	3.9	9.6	6.7	1	23	1098	1120	1098	1120	0.96
19	25	6.1e-06	0.0015	20.3	1.2	3	23	1128	1148	1127	1148	0.98
20	25	4.3e-05	0.011	17.6	3.2	1	23	1154	1176	1154	1176	0.99
21	25	0.00025	0.062	15.2	1.1	1	23	1184	1206	1184	1206	0.97
22	25	0.0013	0.31	13.0	1.2	1	23	1212	1234	1212	1234	0.98
23	25	0.0015	0.38	12.7	2.7	1	23	1384	1406	1384	1406	0.98
24	25	0.008	2	10.5	1.2	1	23	1411	1433	1411	1433	0.96
25	25	0.027	6.7	8.8	0.5	1	21	1439	1459	1439	1460	0.94

Sequence Information

Coding Sequence: ATGGATTCCCAAATAATAATTAACAAAGAAGATGGTGTTGATAAACAGAATCAATCATTTAGTTACATTGCAATTCCTATTGATGCTCTTGATTTATCAAATCAAGAAGTTCAAGCGTTTCTTTCTCAAAATATTATAGTAAAATCATTGCCAGACAATAAATTTTGTGTTGTGGAAACACCTCAGAATGCCATTCGATCCAGTGTAATTGAGTATAGTTCCAATCCAGATCCAATCGATTCAATTCAAAACACACCGATTATACTTTCAAGTTCTGAGAACAACAATGTCATACCACAGGAACTAGGACAAAACATCATCCCCAAAGATGTCCAAAATAAGAAGAAAAAAAAGTTTCAGTGCAACATTTGTTCAGCAAAGTTTAAAAATCCTCAGTACTTCCAAAATCACATGGAACAACATCATAAAAAGAAAAAATATAAGTGCGATCAGTGTTCAGCTAGTTTTAATGTAAAGGATAATTTTATGATACATAAAGCAATGCATGCTAAAGGTGAACCTACTTGTCCTTTGTGTGATAGAAAATTTCAAAGATTAGCGAGCCTTAAGTCTCATCTTCTTTTGCATCAAATTGAAGAAACATTTACATGCAGTGATTGTCAGTTAGAATTTGAAAATGAGGATGAACTTAATAGCCACGTAGCTACTCATCTAAGCGATTTAGTTTCCAACAAAACTCAAGGAACAACAGTAAAACGAGTTTGTAGTTACTGCAATTCCAATTTTGAATCATACAAAGAGTATAAGGAACATATTTCTTATCACATAAAGGTAAATAGATTACTTCACAATTCAAAAAAAAGTAAAAGAAGAACAAATACTAGTAAGGAATATCCACATAAATGCGATGTATGCCAAAAAAGTTTTCTGAAAGTTTGCTTACTGGAACGACATCTTAGGATACACAGTGGTGAAAAACCTTTTATATGCAAAGAATGTAACCGTGGTTTTGCTCAAAAAGGAACTTTGCAGATTCATATGTCCAAACATACTGGAGTTAAGCCTTTTTTTTGTACGTTATGTCCTGCTAAATTTTGTCAGAAAGGTAATCTTCGAGTTCATGTAGAGAAAACCCATACAGTACCAGGCCCTGGGGAGAATATGTACAAATGTAGCTTATGCTCATGCATTTTTAAAAAAGTTGCGTCTTTAAATGGTCATATAACTAGAGTACATTCAGGTAAAAAATATGATGACATCTCGGTAGTTTTAAATCAGTTAAAAGAACTTGAGAGGCAAACTTGTGGTAAAACAAATAATCAAAATCAAAAAGATTCTGCTGTTGCCTCTGAACTAGACTTAAATTGGAATTCTATTCAAAATGATGTCGAAAAAAGTAATTCTGAAGATAAAGTGGATTATAAGTATGTTACTTTGACCGAATCTATTGGAGGAGAGACGGCGAGGAATTATGAAGTTAAGCAACGAAAAGTAGGGGATGTCCGGTGGTACGTTTGCTCTTTTTGTGTAAAAGAGTTTAAAAAACCTTCCGATCTTCTTCGACATATAAGGGTTCATACTCGTGAAAAACCTTATTCCTGTGACATATGCAAACAAAAATTTTCATTGAAGTCTACGTTATCTACACATTTAAATACTCATGTAAAAGAAAAAGTATACAAGTGCAAAATTTGTGATAGATTACTTCCAACTGCCAAAGCTTTGTATGTTCACACCAGACGACACGAAAGGGGCGAATTGAGTAACGAGAAACATACAGAAAAACTGTTAACTTGTAATTCCTGTAAACGTTCTGGTTTTCAAAATGAATTAGAATTGGGAATACATGTTGAAGAGCATAATAAAGATCAGCACAACGGTGTAGGTGCTAATGATAATCAAATAAAACAACCATTATTATTAACACCACAAGGATTACTTCCGGTAGACGTTGTAAAGTCTAAAAACTTGAGTTTATCCGTTAATCAAATTAAACCACACGTATGTTCGATTTGTTGCGCGTCTTTTTCGAGAAAAGTACACCTGAAGAGGCATTTTTTGACGCATACTGGTGAAAGACACTTTAAATGCGAAATATGTCCGAAGTCTTTTTATACTACTTACGCTATGAAGGAACACCTGAAGTTCCACTACAATATAAAAAATCATGCGTGTAAAATTTGTGGGAAACGTTTCGTGACAAAGGCCATTTTAAAGCGGCACTCAGTAACTCATTCCACCCAGAAGCCGTACTTTTGTCCTGTTTGTAGCAAACAGTTTAAAACGATTTCATTGTGTAGGAAGCACATGCTGACCCATTCGACTGAACGTCCCTTTGCTTGTTCTTATTGCGAGAAAGCATTCAAGACTGCTTCTATGTGTCGGGATCACATCAAAATACACAAGAAACAATCAGAAAAAGATATGACGGATTATATTACAGTAATTTCAACTGATGATATAAGAGGGGGAAAATGCAATAATACTAAAAATGAAATAATTCTAAATGCAGTTAATCAAAATTTGGTTAATTCAAATTCCATTCTTCCAACAAATATAAGTGATATTATAAATTCCTCAGGGTTTGCAACAGCAGATGTTCTTTTTGAAAGTCAGAAAAATCACGGAGATCAAACTCCAATGTTGTTACAAATAGATAAAGTTCAAAATTCTGATCAAATGAATAACAGTAACGCTCATTTAGAAAATAATGCAAGTATCCAAACTATTTTTATTGATTATGATGATTTTCAAATGCGTTTATTACCAAACTATAACTTTCTGACGTCTGAGTTTTCACAAGTAAAGGGAACTGATGAAGACCAGAACAACTTAGAGCAGCCTAATATTTTATTATCAATTGACCCAGCTTTAAATCAAGTTAATCAAGCAAATGGCGACACCTTTTTAACTTCTAATGTAGAAACCGTGGGGGCAGTTGATTTAGTTGAAATACAAAACTCAGATGTAGAACAGTCAGAACAAGTAAGGGATCGAAACTTTGATAAAATTGTGATGAATGAAAACGTAGTAAGTGACCTTACATTAACGCATCATAACGTTGCCTTATTTGGTGCAGAAGATTTTGTAGACTATGGTATTCACATAGCACAACCTGAAATTGTTACCGACAAAATTATAATCAACTCATTAAAGGATAAAAAATCTCAAATCTCTTCAATCAATACAAAAAGTGCAAAGGAATCATTTGAATTAGATGATAATAGGAATCTGCCAAAACAAAATGGTCAACAGAAAACCGAAACACTATTAGAAGATTCAGAAAAAGATACCGATTCTCGAAGAAGCAATAAAAAACCAACAACAACGTACCAGTGTTCTTCCTGTTATAGAACGTTTACTAAAAAGAGCACGTTTGTGAAACATCATGATTATCACAAAAAAAAGCAAGACAATATATGCAAGTACTGTTCGAAGTTGTTTAAGAAACCTTCCGATCTTGTGAGACATTTAAGAACCCATACAGGAGAACGTCCTTTCAAGTGTTCACAATGCGAAAAAAGCTTCTCGTTAAAATCGACTCTCGATTCCCATTACAAAACTCATAAACCCGGAGGTCATAAAGAGTTTAACTGTCTCGTCTGTAATTCGTACTTTAGCTCTAAATCGAGCTTGAAAGTGCATATGTTACTTCATACCGGAGCAAAACCATATTCATGCCCTTCCTGTCCCTTAAAGTTTCGAACTACAGGACAAAGGCAGTCGCATATTAAAAAACACACGAAGGAAGGAAATAAAGATGACAAAGGTACAAACAGCAAGTCGAAATTGTCAAAACGGAAATTGGCAACTTTGGCTTTGGAGGCAGCACAACAGCTTCAAGAAATCACTGAATCCACAGAAACATCCCTAGATAATGAAGGCCAATTGTTGAACAATGAGCAAAATACTGGAAGCATAAAGGAAATGTCAGGACAACAGAACAATAAAGATAACAACAAAGCCATTGAAATGGATACTTTGTTTTATCAATTGGACGTTGAAGAAAACTTAGGAACCATTCCAATCTCTTTCATTCAATTGGACGATGACAATCTTTTAAGGATAAGATTGGCTCCCACTGATGGCCAACTATTAGGAGTATCAGATTTCCTTTTAACTGACACATCGATAGAACAAGTCTCCCCTCAGGAATTAGTCAATAATCAGACTAATAACGTGAACGATTTCACTTGCCTTATATGCAAGAAAAAACTGAAGAACCAAAAGATTCTAAAAAAACACATGAAAATTCACGAAAGGAAAAAATATTTCTGTGATAAATGTGCGAAAACATTTGCATTTGAACATGAACTGATTGATCACAACCAAATTCATAATGGAATTAAGAGGTTTCCATGTAAACATTGTGCCAATAAGTTCGAAACGGATGCGAATCTCAAAATACATGTCAAGAGGTAA
Protein Sequence: MDSQIIINKEDGVDKQNQSFSYIAIPIDALDLSNQEVQAFLSQNIIVKSLPDNKFCVVETPQNAIRSSVIEYSSNPDPIDSIQNTPIILSSSENNNVIPQELGQNIIPKDVQNKKKKKFQCNICSAKFKNPQYFQNHMEQHHKKKKYKCDQCSASFNVKDNFMIHKAMHAKGEPTCPLCDRKFQRLASLKSHLLLHQIEETFTCSDCQLEFENEDELNSHVATHLSDLVSNKTQGTTVKRVCSYCNSNFESYKEYKEHISYHIKVNRLLHNSKKSKRRTNTSKEYPHKCDVCQKSFLKVCLLERHLRIHSGEKPFICKECNRGFAQKGTLQIHMSKHTGVKPFFCTLCPAKFCQKGNLRVHVEKTHTVPGPGENMYKCSLCSCIFKKVASLNGHITRVHSGKKYDDISVVLNQLKELERQTCGKTNNQNQKDSAVASELDLNWNSIQNDVEKSNSEDKVDYKYVTLTESIGGETARNYEVKQRKVGDVRWYVCSFCVKEFKKPSDLLRHIRVHTREKPYSCDICKQKFSLKSTLSTHLNTHVKEKVYKCKICDRLLPTAKALYVHTRRHERGELSNEKHTEKLLTCNSCKRSGFQNELELGIHVEEHNKDQHNGVGANDNQIKQPLLLTPQGLLPVDVVKSKNLSLSVNQIKPHVCSICCASFSRKVHLKRHFLTHTGERHFKCEICPKSFYTTYAMKEHLKFHYNIKNHACKICGKRFVTKAILKRHSVTHSTQKPYFCPVCSKQFKTISLCRKHMLTHSTERPFACSYCEKAFKTASMCRDHIKIHKKQSEKDMTDYITVISTDDIRGGKCNNTKNEIILNAVNQNLVNSNSILPTNISDIINSSGFATADVLFESQKNHGDQTPMLLQIDKVQNSDQMNNSNAHLENNASIQTIFIDYDDFQMRLLPNYNFLTSEFSQVKGTDEDQNNLEQPNILLSIDPALNQVNQANGDTFLTSNVETVGAVDLVEIQNSDVEQSEQVRDRNFDKIVMNENVVSDLTLTHHNVALFGAEDFVDYGIHIAQPEIVTDKIIINSLKDKKSQISSINTKSAKESFELDDNRNLPKQNGQQKTETLLEDSEKDTDSRRSNKKPTTTYQCSSCYRTFTKKSTFVKHHDYHKKKQDNICKYCSKLFKKPSDLVRHLRTHTGERPFKCSQCEKSFSLKSTLDSHYKTHKPGGHKEFNCLVCNSYFSSKSSLKVHMLLHTGAKPYSCPSCPLKFRTTGQRQSHIKKHTKEGNKDDKGTNSKSKLSKRKLATLALEAAQQLQEITESTETSLDNEGQLLNNEQNTGSIKEMSGQQNNKDNNKAIEMDTLFYQLDVEENLGTIPISFIQLDDDNLLRIRLAPTDGQLLGVSDFLLTDTSIEQVSPQELVNNQTNNVNDFTCLICKKKLKNQKILKKHMKIHERKKYFCDKCAKTFAFEHELIDHNQIHNGIKRFPCKHCANKFETDANLKIHVKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -