Acya015216.1
Basic Information
- Insect
- Agrilus cyanescens
- Gene Symbol
- -
- Assembly
- GCA_947389935.1
- Location
- OX376712.1:10834883-10844385[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-10 4.2e-07 31.0 0.0 2 35 597 631 596 634 0.92 2 2 8.7 6e+03 -1.5 0.0 5 30 702 725 701 727 0.70
Sequence Information
- Coding Sequence
- ATGTATGTATGTAGATTTAGAGTGAGAAGAGGTGCCGAAATCTACAGTGATCATTTTTTACTCCTGGGTAAAATAAAAACAATAAATACAGTCCAAGAAGAAAGAAATACAGAAAGAACAAATAAAAAAGAAGTTATAAAAACATACAGACTACAAGATGAAAAAGTAACCAGGAAATATGAAATAATAGTAACAAATAAAATACAACATATAAAATGGCAATGGACTAAAATGACAGCAGAAGAAATGTGGGAAAATGTAAAGGCATTAATAATAAATGCGACGAAAGAAGCTTGTGGAACCAATATAATAGGTAAAAGTAATAAAAGAACAGCATGGTGGAATGAAACAATAAGAGAAGAAGTGAAACTGAAAAAACAATTATGGCAGAAATATTTAACAAATAAAACACAAAATAAATATGAAGAATATAAACTCCATAGAATAAAGGTGAAACAATTGATAAATGAAGCGAAAGAAAAATCATGGAAAGAATTTGGTGAAAAATTAGAAACTAGCAGTAAAGAAAATCAGAAACTCTTTTACAATGTCCAAATAAGAGAAGAACTAGAAATAAACCGACTGACTGACTTCATAGAAAAGAGACAACTCAGCTGGCAGTTTTTATTTCGTATACCTTTGAATTTCCTTTTCGGTTTATTTAGCGACTATCGAAAAGTTTTATGCGGTCGTCATAAAATTCGATTAGTTCGTTCACACACAGACGCCAATTGTTACAAAACGAGTGATATTGCAAAGAAATTAACCTTTACAATTTCAAACATTGAGTTACATGTAAAACATGTATATCCAAACGATGCAGTTAAATTGCGACTTTTGGAACAAATAGGTCAGAATAAACCCATAATTATTCCGATTAGACGATGGGAATTACATCAGCTACCAGCGTTACGCAATACTGATAAGGATATTTGGGTTGTTAAAAGAAGTATTAGTATTGAAAGGCCACGTTATGTAATCGTTATGTTTCAAACTGCAAAACGGGATAATACATTAAGAGATATAACAGATTTTGATAATATAAATTTAATGGATTTACGTTTATATTTAAATTCTGAATGTTATCCGTATGAATCTCTTAAATGGACTTTAATAAGAACCGCTACACTGAAGCTTATCAGATTTAGTTTCCACTTAGAACTCAAAATGACTGCTGTCATTCTAGACATACAAGGATTTCATATCCATGAACTTAAAAAATTTGTGGCAAAAGAACTATGTATTTTCGATGGTGATCGTATAGCTCATTTTGTTTTCCAACCACCTTGTGAAATTAAGCAACTGTCATCTGCTACAAGAAAACAAATTCAATGGTTAGAGAGGAATTATCATGGAATTCAATTCAAGGGTAGTGTAAATCTAAACCAAATACCAAACATTCTGGAACGATATTTATCAAATTCCCATCGGTACGGCTGTTGGCTCAGCGAATTAGCGTCCGTGCCTGTTACAACGGCAGCTCCTCGCGCAAACGGTTCGAACCCGGACGCACCACATTCACTTTTTCTCAACAAAAAAAAACAATTACGTCATCAGCCTCTAATACACACACACACATCATCATCATCGCCACCTCCACAGCAGCAGTGCCCCGAAGACAACCCTCTGCGACCACCACAGCGCCGAAGACAAACCCCTTCTTCGCCAACACCACCAACACTACTGCTACCGTCAACCACCCAAAGAATGACCTTGGAAGACATTGCAAAAATGCCAAGAAAGTATACCAAAAAAACTAAAAATCGTGGTGTTGGAAGTAGATATTCAAAGGAAGCATTAGAATTAGCAATAAGGGATGTGAAATCGGGAAAATCTTCACTAAACAAGGCAGCACTCGAACATGGCATACCGAAATCTACCCTTGGATTGAAAGTGAATGGATGGCAAGGTAGACCAGCGGGAGGACATGAGAAAGGTAAAATCCACAAGATCTTGGCCACACGACTCTCCGAATTACCATTCCACCCTCATCAAAGGAGATTTCGGAGGGTCGACGGAGTGCTATTAAACACCTTCACGCTCGACACAATCATTAAAGAGCGTCGATCGAGCAGGAAGCCCCTCAGTGTCTTGTCCCTTGATCTGAGGAAGGCCTTCGATACTGTCTCACATGGCTCTATTCAGAGAGCACTCCGTCGATTTAAGGTCGATCGTCGTACTGAAGAGTTTATTCTTGATGGGTATAGGGACTCCTATACTTCTATTGCTGTTGGGGGCCAAACCACCGACCCCATCTACATTAGTAGAGGGGTCAAGCAAGGAGGCCCCCTATCGCCCGTGCTCTTCAACATGGTGATCGACGAACTTATATGCGCTTTGAAGGAGAGAAGGTTGGGTCTGCCGGTGTCTGAGCACGTGAAGGTCTCCGTGTTGGGATACGCGGATGACCTGTTCTTTTCAGAGCGAGGCTTGGTCATCAACGCCAACAAAAGTGTTGCCTTAACGGTTGGCGTTCTTCGCAGTAAAAAGGCGCTTTACACGGTGACCAAGCCAACTTTCTACGTCAACGGAGCGCCCATAAAGCAACTTGGCCCAGTTGATCTGCTACACTACCTGGGCCAAAAATACTCTACTATGGGTCAAGCCCCTCTCCATTTCGCTGACCTAAGAACTCGGCTACAGCGACTATCGCAAGCGCCCTTAAAACCAGCGCAGAAGCTGTACCTGCTAAAGCACTTCCTAATCCCACGCTTAATTCACGCCCTTCAGACTCCAAGGTTAACATTACGAATACTTGTTGAGACGGATAAGCTCATCCGAGTGACAGTCCGGCGGTGGCTACACATGCCCCGCTCAAGCGCCGAAGCCTTCATCCATGCACCTCTCCGTGAGGGCGGTCTTGGTGTGACCGCCCTGCGCACTCTGATTCCAGCTACCATGAGGCGCAGATTTACTAACATCGCCGTCACAGCCGATCTTTCTACTGCGGCCACTCTAGCTCTGCCCTACGCTGATAAGCTATGGCAGACGCTGTTGAGAATGACGGCTAACCACGGAGACAATCGTAACAGGGTGAAGGCATACTGGAGCCAGAAACTCCAAGATAGCTACAGCGGCAACGGCTTGCGACAAGGTGCTACTAGCAGTTTCAGCTCATATTGGGTAGACAATCCACCCCAATATTGGTCCGGGCATGAGTACATCAAGGCCGTGTTACTCAAAGCCAACCTACTGCCGACGAGGGGTATTCCGTCTAATCCACCCCACGAACGTTTTTGCCGAGCGGGGTGCAACCGCGTGGAATCTCTTTCCCACGTGCTTCAAGGTTGCCCCCTTACACATTGGCCCCGCATTCGGCGATATGACCGCATCGTCAATCTCTTGCGGAAGTTCGCCGAGCGGAACGGGTGGATAGTGGAGGAGGAGCCTAACATCCGGTGCTCCCACGGAACCCTTCGCAAACCGGATCTCATCCTACACAAAGGAGACCGGGCAGTAGTGTGCGATGTGGCCATCTCCTGGGAGGGTCCCCGCCCTCTATCTGCAGCGTTTGAGGCGAAACTGGCGTACTACACTACCCCGACCGTGATGGACGCACTGGAAAAGCGCTACCCATCCAGGGCCATCATAGTCACTGCTCTGCTTATCGGAGCCAGGGGTGTGTGGTGTCAAAATAACGGGCAAATTTCTTCCATCCTGTCTTTGACAGATGCCCAAATACGGTCCTTAATCACGAACACGCTGAATGGTAGCACGCTCATCCACAGCGAATTTATGAGGACCGTATTCGCCAGAAGAGCCGGAAGGCCTTAG
- Protein Sequence
- MYVCRFRVRRGAEIYSDHFLLLGKIKTINTVQEERNTERTNKKEVIKTYRLQDEKVTRKYEIIVTNKIQHIKWQWTKMTAEEMWENVKALIINATKEACGTNIIGKSNKRTAWWNETIREEVKLKKQLWQKYLTNKTQNKYEEYKLHRIKVKQLINEAKEKSWKEFGEKLETSSKENQKLFYNVQIREELEINRLTDFIEKRQLSWQFLFRIPLNFLFGLFSDYRKVLCGRHKIRLVRSHTDANCYKTSDIAKKLTFTISNIELHVKHVYPNDAVKLRLLEQIGQNKPIIIPIRRWELHQLPALRNTDKDIWVVKRSISIERPRYVIVMFQTAKRDNTLRDITDFDNINLMDLRLYLNSECYPYESLKWTLIRTATLKLIRFSFHLELKMTAVILDIQGFHIHELKKFVAKELCIFDGDRIAHFVFQPPCEIKQLSSATRKQIQWLERNYHGIQFKGSVNLNQIPNILERYLSNSHRYGCWLSELASVPVTTAAPRANGSNPDAPHSLFLNKKKQLRHQPLIHTHTSSSSPPPQQQCPEDNPLRPPQRRRQTPSSPTPPTLLLPSTTQRMTLEDIAKMPRKYTKKTKNRGVGSRYSKEALELAIRDVKSGKSSLNKAALEHGIPKSTLGLKVNGWQGRPAGGHEKGKIHKILATRLSELPFHPHQRRFRRVDGVLLNTFTLDTIIKERRSSRKPLSVLSLDLRKAFDTVSHGSIQRALRRFKVDRRTEEFILDGYRDSYTSIAVGGQTTDPIYISRGVKQGGPLSPVLFNMVIDELICALKERRLGLPVSEHVKVSVLGYADDLFFSERGLVINANKSVALTVGVLRSKKALYTVTKPTFYVNGAPIKQLGPVDLLHYLGQKYSTMGQAPLHFADLRTRLQRLSQAPLKPAQKLYLLKHFLIPRLIHALQTPRLTLRILVETDKLIRVTVRRWLHMPRSSAEAFIHAPLREGGLGVTALRTLIPATMRRRFTNIAVTADLSTAATLALPYADKLWQTLLRMTANHGDNRNRVKAYWSQKLQDSYSGNGLRQGATSSFSSYWVDNPPQYWSGHEYIKAVLLKANLLPTRGIPSNPPHERFCRAGCNRVESLSHVLQGCPLTHWPRIRRYDRIVNLLRKFAERNGWIVEEEPNIRCSHGTLRKPDLILHKGDRAVVCDVAISWEGPRPLSAAFEAKLAYYTTPTVMDALEKRYPSRAIIVTALLIGARGVWCQNNGQISSILSLTDAQIRSLITNTLNGSTLIHSEFMRTVFARRAGRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -