Acya016734.1
Basic Information
- Insect
- Agrilus cyanescens
- Gene Symbol
- -
- Assembly
- GCA_947389935.1
- Location
- OX376712.1:19657540-19662320[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-10 5e-07 30.8 0.0 2 40 19 57 18 60 0.91 2 2 1.4 9.9e+02 1.0 0.0 23 38 388 403 386 408 0.83
Sequence Information
- Coding Sequence
- ATGCCGCGCACATATGTAAAGAAGGTGCGGGGTAGGCGTTATCAAAATTATGCTCCAGAAACGATGGCCAAAGCTGTGGAAGCTGTAAAGCAAGGGATGTCCCAGTTGGCTGCAAGCAAAAAGTTCAAGGTCCCGAGGACAACTTTGTTGGAAAAAATGCACCAGAAACATCCCTTAaagccagATGGCTGGAGAAAGGAATCGCGTCGAAAAGGGTCCATCCCGAAGGAGCAGTTCTCATCGCTGTTAAACCGGTTATGGGTACACATAACTTTTAACCCTGAAACCGTTTTGGCAAAGCTTCCAACGACACAGTCAAATTCGGAAAGGTCTTTGGATGAAAGTCTACTGGAGTTTCTGAAGGAATCTCGTGGGGAAAGAAAGTTTTATATAAGACCGGGTGAACAAATGAAAATGAAACCGGCTACGATGGCCCCCAAATCTGCAGTTGCCCAAAAGCTTGATGTTTTACCAGGTGAAGCAGCTACTGAGTTACCCATTTCTTCAGACACCGAAGAACATGATGTTTTACCACCAAAGTTGTCTAAAAAGGCTGTTGCCAAAGCCAATTCAAAGAAGAAAAAATCAATGACAACCTGCTTTAACCGTGACGGCTGTCCCAATTCCAATAAGAACTGCCCCATGCATAGATTTCCCAAAGATCCCTTGATGCGCATTAGCAAAATCGCAGGTGGGGATAAAGGAGGTTGTCTATGCTCATTATACCATCGGCTCTTGTTGATTAAACATAGTCTTACGTACAGTACCTGCCGAAAGTTTTGTTCCAACATGAATAGTAGTGAGAGTCGAAAACAAGCGTTAAATGTCCAGTGCAAAGAAGTAATTGCAAACGTTTTGCAATTTTTTGAAGCAGAAAGGGACCAAAAGGACTTTATTATTCCGTTTAATAAAGTCCACGAACGTGTTGCAGCCGCAACGGGATATAGTCTTAAAAATATTCAACGTATATCATCTAAAAAGAAGAAAGTTGAGGAAGGGGAGCAGGCTTCGTTCAACAAACCAAGACAATTCCAGAAATCCTGTCCAAAATCAAGTTTGGATGAATTCGATCAAGACCTTCTGCGTAGAATCATTCACAACTTCTACATAACCGATAAAATGGTTCCAACCCTGAAAAGGATACACCATAAATATAAAGAAGCAACGGGATATGAATGCTCAACTTCAACAATATGGAAGGTTCTGCATAAAATAGGATTTAAATGGACTAAAAGCAAAACCAACCTAAAAATACTGGTGGAAAGGCACGAGATTCGGCACTTAAGAATAGTTTTCTTAAGAAAAATGAAAACTTTCCGCGAAGAAGGTCGTCCTATTGTTTACATGGATGAAACGTACATTCACTCCAATCATGTCCACAAAAGCTCTTGGAACGATTTCGTTCATGCGGGTGGAACCATGGGCTTCATTAAAAATGCCGATTTAATATTTAAATCTGGCATGAAATCGGGAGACTACCATGACGACACGAACTATAAAAACTATAAAAAATGGCTTCAAGAGAAGCTTATTCCCAATTTACCGCCCCATTCGGTGTTGGTAATTGACAATGCACCGTACCACAACGTGCAAAAGGAAAAGGTTCCTTCTTCGAACGCCTTAAACGCGGAAATGAAGAGTTGGCTGCAACCTCGAAACAACATACCGTTTAATGAAAGAGCCTTAAAGCCGGATCTTTATTATTTGATAAAGATGCACAGGCCAAGGTACAAAACGTACGAAGTCGATGACATTGTTAGGTCAGCGGGACATGATATCTGTAGGCTGCCACCTTACCACCCGGATTTGAATCCTATTGAAAACGTTTGGTCCAATTTGAAGCGATTTGTTGCCGATCGAAACGTTAGTTTTAAATTAGACGACGTTGAGGCATATTGTAAACAGTTTTTTACGTCATTTACCGAACAATCATGGAAAAGATTGTGTGACCATGTCGTAAAAACTGAAAATCAGTATGCCGCTGAAGACCCGGCAGTTGATTTAGTAATTGATGACCTGATCATAAATTTGAGGAATGACGATGACGAATCATCTGATTTTTCAGACACCGACAGCTCTGATTTAACAGATGAAGATGCACTGGGCACTTAA
- Protein Sequence
- MPRTYVKKVRGRRYQNYAPETMAKAVEAVKQGMSQLAASKKFKVPRTTLLEKMHQKHPLKPDGWRKESRRKGSIPKEQFSSLLNRLWVHITFNPETVLAKLPTTQSNSERSLDESLLEFLKESRGERKFYIRPGEQMKMKPATMAPKSAVAQKLDVLPGEAATELPISSDTEEHDVLPPKLSKKAVAKANSKKKKSMTTCFNRDGCPNSNKNCPMHRFPKDPLMRISKIAGGDKGGCLCSLYHRLLLIKHSLTYSTCRKFCSNMNSSESRKQALNVQCKEVIANVLQFFEAERDQKDFIIPFNKVHERVAAATGYSLKNIQRISSKKKKVEEGEQASFNKPRQFQKSCPKSSLDEFDQDLLRRIIHNFYITDKMVPTLKRIHHKYKEATGYECSTSTIWKVLHKIGFKWTKSKTNLKILVERHEIRHLRIVFLRKMKTFREEGRPIVYMDETYIHSNHVHKSSWNDFVHAGGTMGFIKNADLIFKSGMKSGDYHDDTNYKNYKKWLQEKLIPNLPPHSVLVIDNAPYHNVQKEKVPSSNALNAEMKSWLQPRNNIPFNERALKPDLYYLIKMHRPRYKTYEVDDIVRSAGHDICRLPPYHPDLNPIENVWSNLKRFVADRNVSFKLDDVEAYCKQFFTSFTEQSWKRLCDHVVKTENQYAAEDPAVDLVIDDLIINLRNDDDESSDFSDTDSSDLTDEDALGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -