Acya024372.1
Basic Information
- Insect
- Agrilus cyanescens
- Gene Symbol
- -
- Assembly
- GCA_947389935.1
- Location
- OX376710.1:8857963-8858886[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.27 1.9e+02 3.3 0.0 27 45 21 39 15 39 0.87 2 2 4.7e-10 3.3e-07 31.4 0.1 3 37 62 96 60 99 0.95
Sequence Information
- Coding Sequence
- ATGAAGGTTGCATGGAGGGAAATACTTACTGATTATAAAATGAAATATGCTCGTCAAGCAGGAATACCAAAGGACGTAATCCATAGACTTTTAAAAGAAGCGCTGGATAAAATGAATGCAAGTGCCTACTCAGTCCAAGAACTAGTCTGTAAATCTGGTCAAAAACGGCCGCCGATCAATTCAGAAAATTTGACAGCAGCTATAAAGCAGTGTATTAACAAGGAGATTTCTATGCGGGAAGCGGAAAAACGCTATAGTGTATCAAAAACAACATTAATTAGACACATAAGTGCATTTAAGAAATCAGAAGCTACTGAATTTAAATATGTAGCAAATAATAACACAAAACAAGGGGTCGAGTGGGGACTACAGTAG
- Protein Sequence
- MKVAWREILTDYKMKYARQAGIPKDVIHRLLKEALDKMNASAYSVQELVCKSGQKRPPINSENLTAAIKQCINKEISMREAEKRYSVSKTTLIRHISAFKKSEATEFKYVANNNTKQGVEWGLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -