Acya016047.1
Basic Information
- Insect
- Agrilus cyanescens
- Gene Symbol
- -
- Assembly
- GCA_947389935.1
- Location
- OX376712.1:16689832-16699645[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-11 2.8e-08 34.8 0.0 1 42 20 61 20 64 0.93 2 2 1.7 1.2e+03 0.7 0.0 27 42 119 135 119 138 0.90
Sequence Information
- Coding Sequence
- ATGAACAATCAAAAAAAAAAAAATCAACAAAAGGTGCGTAGAGTTCTTCATACGTACTCGGAGGAAGACTTAAAAAACGCCCTACATGAAATCAGGGAGAATAAAATGGGAATTAGAAGAGCATCTAAAACCTTTAATATCCCGAAAACAACAATTCTGGATAGAATATCTGGCAGAGTGCCGGATAAATTAGGAAGACCAGGTCCACCGCCACTACTGACAGTGAAAGGTGAAGACCGGGTGAAGGAGTGGATAATTAATACTGCAAAGTGTGGCTTTCCCATTAAGAAAGAAACTCTATTTAATGTCGTATCAACTATAGCAGCAGACTCTGGAAAAGCAATCTTTAAGGACGGGATTCCTCACGAAACTTGGTATAAAAATTTTTTAAAACGCAATCCAGGCATTTCACTAAGGCAAGCAGAAAGCATTAATAAAGCAAGAGCTATTtcaatgaaaacagattggaaaaaaacagttcgtgattggcaaagtATGCCTGAAAACATTAACTCCGCTGTCACAAAAATAAATTTTTGTAGCGTTTTTAATAAAGTTTTATCAAAAACAGATGAACTTAGGGTATATATAAAAAACGGCTTTAGAAAGTGTGGACTATATCCCCTGAATCCTGATGCGGTTGATTATTCAAAATGTGTAACCAACACAACCGAAAAGTTAAAGAAACCGATCAGAAAACGAGTCAGAAATGAAAATATATCCCGGCGTGACATAACATCCACTAAAAAAGTAATAGAAAGAATAAGGTCCGATTTACAATTGTATGGTATAAACGTCGATGTAATTTTAAATGAAGTAAATTTGCTAGAAGAAATGTTGTCACCTAGAAAGCAAAGTGTTAGCTCTAATAATACAACATCAACACCAAAAGTGTTACAACATTCCCATCAAAGTCATAACGATGGCGGTTCACTTCTTGAACAAGCTTGTGAATTTCCTTCGAACTTATACTGTGAAATCAGAGAACCTATGAAAAGTACACCAACTTTATATACAGGTAACTGTGATATAAACGCACCCAGTACAAGTTCAGCTATCCAAGATTTACCAGTTATAATAATGGACGAAGGATCTGAAGTGCCCAATGAGGATAATCATAGAGACGCAGTTTTCAACAGCACCATAATAGATATTCCAGGCGTAAGTCTTCAAAGCTGTTTTACAACCTCTTTCATAAATAAATTAGAAAAAGAAGTACATGAATTAGGTTTACCTATTATAGACATTTCCGGAATCGACATTAAAACAAATGAAGCCGCCATCAACACTCAAATGCTTAAGAATCCAAATTCAGATGGAAACCAAGTTGTTAAATCATTCAATAATATGACTGAAGTTAATATTACTAATCCTGATAATCCAAAGAGTGGCCATCGGTGTATCAGTAATGAACAAGACAAAATTATTATAAAACAAATTAAGATAATGAAACCATTTAGTACTATACCGGATCCCCAACCATCAAATAGCACAAACACTAATTCTGAAAGTATCCATCGCCGTAATGAAGTATGTGATAATAATTCAAATGGCAAAAATGAAGAAAAAGTACTATCTCCACTTACTAAATCATTTGAAACGCATCTTAATTATCCCGATCCCATAAAAAAAGGTAAGAACACAAATAAAATAAGAATAAAAAATAAAGCTCCAAGTGCCATTTCCTCTGAAGAGTGGCGAGAATTTTATAGAAAAAAGGATACCGAAAAACTCCAAAAACAACTAGATATCAATAAAAGAAAGGAAGAGAGGAAAGTATTAAAGGAAAATAAAAAGGAGTCTGTCCCACAACTAAATGAAAGTGAAAAAACTAATACAGTTAATAACAGTGATCATGTTGAAAATATGGGTAGTGGTAGTAATGCTACCAGTGATGATATAGTGCTATTGAGTGGATCAGATATTCCTCATAATGTTCTTAATTTAATAATGAATGATTCAGATTTAATGGAGATAAATGATTGCCGATAG
- Protein Sequence
- MNNQKKKNQQKVRRVLHTYSEEDLKNALHEIRENKMGIRRASKTFNIPKTTILDRISGRVPDKLGRPGPPPLLTVKGEDRVKEWIINTAKCGFPIKKETLFNVVSTIAADSGKAIFKDGIPHETWYKNFLKRNPGISLRQAESINKARAISMKTDWKKTVRDWQSMPENINSAVTKINFCSVFNKVLSKTDELRVYIKNGFRKCGLYPLNPDAVDYSKCVTNTTEKLKKPIRKRVRNENISRRDITSTKKVIERIRSDLQLYGINVDVILNEVNLLEEMLSPRKQSVSSNNTTSTPKVLQHSHQSHNDGGSLLEQACEFPSNLYCEIREPMKSTPTLYTGNCDINAPSTSSAIQDLPVIIMDEGSEVPNEDNHRDAVFNSTIIDIPGVSLQSCFTTSFINKLEKEVHELGLPIIDISGIDIKTNEAAINTQMLKNPNSDGNQVVKSFNNMTEVNITNPDNPKSGHRCISNEQDKIIIKQIKIMKPFSTIPDPQPSNSTNTNSESIHRRNEVCDNNSNGKNEEKVLSPLTKSFETHLNYPDPIKKGKNTNKIRIKNKAPSAISSEEWREFYRKKDTEKLQKQLDINKRKEERKVLKENKKESVPQLNESEKTNTVNNSDHVENMGSGSNATSDDIVLLSGSDIPHNVLNLIMNDSDLMEINDCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -