Acya023756.1
Basic Information
- Insect
- Agrilus cyanescens
- Gene Symbol
- -
- Assembly
- GCA_947389935.1
- Location
- OX376710.1:2235619-2240129[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8e-12 5.5e-09 37.0 0.0 1 39 283 322 283 326 0.90 2 4 1.2e-12 8e-10 39.7 0.1 1 39 337 375 337 379 0.95 3 4 4.1e-16 2.9e-13 50.8 0.0 1 45 392 437 392 437 0.97 4 4 7e-16 4.9e-13 50.0 0.0 1 39 444 483 444 486 0.94
Sequence Information
- Coding Sequence
- ATGAGCAGAGGTGATGGCGGGGGTCGTATTAGGTCATTACTGAAGACCGCTGATCAGTTAAAAATAAAGGGTTTGTGCGAGTCGGAGGACAATAAGGACAAAGAATCTTCCGTTCCTCCGACACCAGTTTTATCGAAAGATCGAAGTAAATTGAGAAAAATCTCGTCACCAAAACACATAAAGTTAGAAGAAATAAGTAGAAATCAAGACTGTGATATAGAAAGAGAGTATCAAGACAGTTTAGATATAGGCGAAAGTGTAGTGGAAGAGAGATGCTCAGAACGACGAAATAATTCGACAGACGAAGACAGCAATGGTCCCTTAGTTGTTGATGAAGAACCAAAGAGAAAGAAACCAGTACAAAACCAAAATAAAACAAATATGAGCAGTCATGGTCTTCTCGAAGGACAGGCATTTTTCTCCCAGTTGTACGACAACGATGAATTCCCTCCGGAACCTCCTGCCCCGACAGCGATTCCTGTTGGACACGTCGACATGCAAGACCATTCCCCAACTAGGTCCTTACTATCAACTCATCGGACCGATATATCAGATTCGCATATTAAATATGAGGATATAAAAAAAGAAACTAGCATCAAATTTGAAACGTTGCGGTCCTACAAACACGAAATGATGGATCTGGATTCGTCTCAACTTTCAGAACCTGACCATTCGTTAGACAGTTACGAGGAAGCGGAAAGGGGACCTCATTCCATGATGGTAACTCCTGATATGAGTGGAATGGTTTCAGGAGACCACAACAACAGCAACGGATACTCTCATCATAGATTCAACGACCAGGATACGCCTACGGGAAGATCACACGGAGGAGGACCCAAAACGTGGACGCAAGAAGACATGGATTTAGCTTTGGATGCTCTTAGAAACCACAATATGAGTCTCACAAAGGCTTCAGCAACGTATGGTATCCCTTCGACGACCTTATGGCAAAGGGCGCACAGGTTAGGAATAGACACCCCGAAAAAAGAGGGCCCCACAAAATCGTGGACGGAAGAAAATTTAAATTCCGCACTGGAAGCACTCAGAACAGGAACCATTTCAGCGAACAAGGCTAGTAAAGCATACGGTATCCCCAGCAGCACCCTTTACAAAATAGCGAGGAGAGAAGGAATCAAACTGGCAGCTCCTTTCAATGCAGCTCCGACAACATGGACTCAAGAAGATTTAGAAAAAGCTCTAGAATCCATCAGGACGGGGCAGTCGTCAGTTCAAAAGGCTTCCACCGAATTCGGGATTCCAACAGGAACGTTATACGGCAGGTGTAAAAGGGAGGGAATCGAGTTGTCCAGATCGAATCCTACACCGTGGTCTGAGGATGCGATGGGCGAAGCACTGGAAGCTGTCAGATTAGGTCACATGTCAATTAACCAGGCAGCAATACATTACAATTTGCCATATTCGTCGCTGTATGGCCGGTTTAAAAGGGGAGTGAAGTACGACATGGAACCGATTGATACAAACAATTCCGACAGCCAGTCGCAGCCAGAATCTCAGGTATTGCTCATGGACTATCCGAGTGCTCATCAGCAGATCCAGTATCAGCACCACCTGAACAGCTGA
- Protein Sequence
- MSRGDGGGRIRSLLKTADQLKIKGLCESEDNKDKESSVPPTPVLSKDRSKLRKISSPKHIKLEEISRNQDCDIEREYQDSLDIGESVVEERCSERRNNSTDEDSNGPLVVDEEPKRKKPVQNQNKTNMSSHGLLEGQAFFSQLYDNDEFPPEPPAPTAIPVGHVDMQDHSPTRSLLSTHRTDISDSHIKYEDIKKETSIKFETLRSYKHEMMDLDSSQLSEPDHSLDSYEEAERGPHSMMVTPDMSGMVSGDHNNSNGYSHHRFNDQDTPTGRSHGGGPKTWTQEDMDLALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIKLAAPFNAAPTTWTQEDLEKALESIRTGQSSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGVKYDMEPIDTNNSDSQSQPESQVLLMDYPSAHQQIQYQHHLNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00031713;
- 90% Identity
- iTF_00031713;
- 80% Identity
- -