Basic Information

Gene Symbol
ct
Assembly
GCA_947389935.1
Location
OX376712.1:2284894-2309737[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.8e-27 4.8e-23 82.4 0.0 2 72 986 1057 985 1062 0.95
2 3 4.5e-32 7.6e-28 97.8 0.0 3 77 1394 1469 1392 1471 0.96
3 3 1.6e-30 2.7e-26 92.8 0.0 3 76 1606 1680 1604 1683 0.96

Sequence Information

Coding Sequence
ATGGAATTTAACCAGGAGCAAAGCTCAAATAATCTGGTAATTAGTAGCTTAAGTTATAAGAAAAGTTTGAAGGAATTTAACTATGAGCAAAGCTCAATTAATCTGGTAATCAGTTGCTTAAGTTATAGGACAAGTTCGATGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATTAGTAGCTTAAGTTATAAGAAAAGTTTGAAGGAATTTAACTATGAGCAAAGCTCAATTAATCTGGTAATCAGTTGCTTAAGTTATAGGACAAGTTCGATGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATTAGTAGCTTAAGTTATAAGAAAAGTTTGAAGGAATTTAACTATGAGCAAAGCTCAATTAATCTGGTTATCAGTTGCTTAAGTTATAGGACAAGTTCGATGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATCAGTTGCTTAAGTTATAGGAAAAGTTTGAAGGAATTTAACCATGAGCAATGCTCAATTGGTCTGGTAATCAGTTGCTTAAGTTATAGTACAAGTTCGATGAAATTTAACAAGGAGCAAAGCTCAATTAATCTGGTAATTAGTAGCTTAAGTTATAAGAAAAGTTTGAAGGAATTTAACTATGAGCAAAGCTCAATTAAACTGGTAATCAGTTGCTTAAGTTATAAGACAAGTTCAATGGAATTTAACCAGGAGCAAAGCTCAAATAATCTGGTAATTAGTAGCATAAGTTATAAGAAAAGTTTGAAGGAATTTAACTATGAGCAAAGCTCAATTAATCTGGTAATCAGTTGCTTAAGTTATAGGACAAGTTCGATGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATCAGTTGCTTAAGTTATAGGAAAAGTTTGAAGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATCAGTTGCTTAAGTTATAGGACAAGTTCGATGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATCAGTTGCTTAAGTTATAGGAAAAGTTTGAAGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATCAGTTGCTTAAGTTATAGGACAAGTTCGATGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGACAAGTCAATGGAATTTAACCAGGAGCAAAGCTCAAATAATCTGGTAATTAGTAGCTTAAGTTATAAGAAAAGTTTGAAGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATTAGTAGCTTAAGTTATAAGAAAAGTTTGAAGGAATTTAACTATGAGAAAAACTCAATTAATCTGGTAATAAGTTGCTTAAGTTATAGGACAAGTTCGATGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATCAGTTGCTCAAGTTATAGGAAAAGTTTGAAGGAATTTAACCATGAGCAATGCTCAATTGGTCTGGTAATCAGTTGCTTAAGTTATAGGACAAGTTCAATGGAATTTAACCAGGAGCAAAGCTCAAATAATCTGGTAATTAGTAGCTTAAGTTATAAGAAAAGTTTGAAGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATTAGTAGCATAAGTTATAAGAAAAGTTTGAAGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATTAGTAGCATAAGTTATAAGAAAAGTTTGAAGGAATTTAACTATGAGAAAAACTCAATTAATCTGGTAATAAGTTGCTTAAGTTATAGGACAAGTTCGATGGAATTTAACCAGGAGCAAAGCTCAATTAATCTGGTAATCAGTTGCTCAAGTTATAGGAAAAGTTTGAAGGAATTTAACCATGAGCAATGCTCAATTGGTCTGGTAATCAGTTGCTTAAGTTATAGGACAAGTTCAATGGAATTTAACCAGGAGCAAAGCTCAAGTAATCTGGTAATTAGTAGCTTAAGTTATAAGAAAAGTTTGAAGGAATTTAACTATGAGAAAAATTCAATTCATCTGATTACTCAGCTTTTGGAAGAAGTCCAACGGTTACGGCTCAGCATCACGAAACTACAGGAGTCATCCGTGTCGCAAGTTTCGAGATTGGAAGAAGAACTGGAACAGAAGCGCCAACACATCGCACGGCTAGAAGCTAAACTCGACACGCAGAGAGACTACGAAGAAATTAAAAGGGAAAATAGTTTATTAAAATCAGTTTCGTTCAACGCCAACCATCCCAACAGCAAGACGGTTGAAGAGTTAATCGATAGGTCGAAGAATTTACCGCAGCAATCAGAAAATTTGGATGAGAATCCTGTACAAGAAATCGAAGGAGACGAGATTGCTCCATCATCAACACCACATCACACAACCACCTCACCACCCACCACCTCCGCGACACCACCTTCGTCCCTGGCCCTTCCACCTCTCTTCCACAACGTCGAGACTTTCGGATCAATTCTTGGAGAAGAGATTGCCGCCACTTGGCGACGAAACATCGAAAACATAACACTCAACAATCGAGTAATACCATCATCACCGTCCACAGATGCACCCCCATCGAAGGCCGTAACCCCAGTGGCAGCAGATTCAACGGAAAAGAGTACCGCGTCCACCCCACAACCAGCGGAAGCAGCGTCGGGCCCTCGGTCGAGCCCTGTGGAACCCCTTCTCAACGGAAGTCCGAAAAGTCCAGAAGATAACAACAACCAACATGTCAGCAACAACAACCTACCCCTTGCTGCCACCATGTGTGCGGTTAACAACTTCCTCAGATCCGACGACAGCCTAAAAAGCCCATACAGGTTCGACGATCACAGATCACCGTACAGGTTCTCGGACGATTTGGGGATGCCACCGGGAACGATGGTGGGACGATTGGGAGAGAGTCTGATTCCTAAAGGTGACCCCATGGAAGCCCGGCTGCAGGAGATGCTGAGGTACAACATGGACAAGTACGCGTCTCAAAATTTAGACACCCTGAACATTTCGAGGAGGGTGAGGGAACTGTTGTCCATCAACAATATCGGCCAAAGACTGTTTGCTAAATATGTTCTCGGATTATCGCAAGGGACTGTTTCGGAGCTATTATCGAAACCCAAACCTTGGGACAAACTGACTGAGAAGGGACGTGACAGCTATAGAAAAATGCACGCTTGGGCTGTTGATGAAAATGCCATCATGCTGCTGAAGTCTCTCATACCAAAGAAAGACAATTTTTCCTCAGGCAAAGAAACGGGGATCCCAACATTCGGTCGTCCAGAAGGTGATTTCTCCGAGGAGAGAATAGCACATATCCTGAACGAGGCGTCCCATCTTCAAATGAAACCCGAGGACTCCCACAGCAACGAAGATTCGAAATCGCCCCACGCCCAGTGTTCCAGCCCATTTTCCAAAGAATCCTCACAAAACAGAAAACTCAAGAAATACGAAAACGACGACATACCTCAGGAAAAGGTCGTCAGGATTTATCAAGAAGAACTCGCGAAGCTCATGGGACGAAGAATCGAAGACTTAAGAAGGGATCCATTTCCCAGTATGTTTTTCCCTCACATGTTCAGCGGCGGTCCTATGGACCGTACTCAGGAGGAAATCCGAATGGCCCTGGACGCCTATCATCGTGAATTAGCGAAATTGAACCCTTGCCAGAACCCCGCCCAGATGCCcaacttaggtctacttgcccttcaacaacaagctcttgcccaacatcagcaccagcaacaccaacaccaacagcagcagcagcaacatcaacagcagcaacatcctcatcaacaacccccaagtcagcagcagcccttgaacggtggagttcaagatctttctcttccAAAGGACAAACCTAAAATGATGAATGGTATTGACGAAAAAAGTGCAAAAGATCAAGACAGTATGTCTCATAACAGCGCGTTCAGCTTGGTGAGGCCGAAAATGGAACCAGGGACACCGTCTCAGACTGCAAGTTCAACAGCTTCGAGCCCGTTGAGCAATTCCATTCTTCCACCAGCGATGACGCCCACGGAGGACTTCTCGACGTCAGCGGCAGCAAGTCCGCTACAACGAATGGCCTCCATCACAAATTCCCTTATTTCACAACCACCTGTTCAACAACACCATTCCAGCAGCCAAAGGCCATTGAAAGCGGTTCTTCCACCGATTACACAACAACAATTCGATTTATACAACAACCTCAACACAGAAGAAATAGTAAAGAAAGTAAAAGAGCAACTTAGCCAATACTCCATTAGCCAAAGACTGTTTGGAGAATCTGTGTTAGGATTATCACAAGGTTCTGTCAGTGACCTTTTGGCACGGCCAAAGCCTTGGCATATGTTAACCCAGAAAGGACGAGAGCCTTTCATACGTATGAAAATGTTTTTGGAAGACGATAACGCAGTCCACAAACTTGTAGCCAGTCAGTACAAAATAGCACCTGAGAAATTGATGAGAACTGGAGGATACGGCGGAGCGAATCCTACGATCAGCAAACCCTTACCACCCACCCCAAAGATGCTCAGCGAAGCAGCCGGTCTTCTAAACAAGATGCACGAAAGTCAAAGTCTTCTTCCGCCCTCACTCCAAATGGTCGCAAATCAAAATCATTCCATTCCCCATTCCCACGCTCCCACGATGCTGTTAACACCACCAGGAATTCCACCACCGCATCATATGAACCTTCAAAGCACTGACCACATGAAGAAAACAAACCCCAGCCCTCTAAGCATATCACATTCCTCGCTAGCTAATCAACAAGTTAGTAGCATTAGAGGTCTTCATCCCCATATGTCGCCCAGCGTATACGAAATGGCAGCACTCACTCAAGACTTGGACACGCAGGTCATTACCACCAAAATCAAAGAGGCGCTTCTAGCCAATAATATCGGTCAAAAGATATTTGGTGAAGCAGTTTTAGGATTATCTCAAGGGTCTGTAAGTGAGCTGCTATCCAAACCCAAACCTTGGCACATGCTTAGTATAAAAGGCAGGGAGCCGTTCATTCGTATGCAGTTGTGGTTGAACGACGCCCATAACGTTGAACGCCTCCAGGCTTTAAAGAACGAACGACGTGAAGCCAACAAGAGACGAAGATCAACAGGTCCAGGAACTCATGACAACAGCTCGGATACTTCATCTAACGACACATCTGAATTTTATCATTCCAATTCACCTGGACCTGGGCCTCAATCTGCCAAGAAGCAACGTGTTCTGTTCTCTGAAGAGCAGAAGGAGGCCTTGAAGCTTGCTTTCGCTTTGGATCCGTATCCAAACATCGCCACCATCGAATTTCTAGCGAGTGAATTGGGACTCTCGTGCAGAACCATAACGAATTGGTTCCATAATCATCGGATGAGGTTGAAGCAGCAAGCGCCTCATGGAGTTCCTTCGGATATACCACCTCGTGATCAAAATGCGAGTCAAGCACCCTTCGACCCAGTTCAATTTAGACTGTTATTAAACCAAAGATTATTAGAGTTATCAAAAGAAAGAATGGGTCTTAGTAGTGTACCATTACCATATCCTCCGTACTTGGCTACAAATCCAAATCTAGCCGCCTTCTTCAGTAGAGGTTTGTTGCCCACTAACGAACTGGATCTGTCGGCTTTGAATAATGCCGTTAAGGACCAAATGAGTGGATTAGATCTCTCCATGACCTCTCTGAAGAGGGAACCCGACGATTTCGAAGACGACGTCGATAGTAATATGGGCTCAGATGATTCGAACCTTTCGGAAAGTACACCTGAAGGTATCAAATCTGAACCCAAGGAGACCCCGTCGCCCAGTTTAGGTAGTAATCAAGGTCGTTCGTCCAGAAGGAAGCCTGCCGCGCCGCAATGGGTTAATCCGGAGTGGCAGGACGAAAAGGAAAAGCAACCCACTGGGAACGAAGTGATCATAAATGGGGTTTGTGTAATGCAAACTGAAGATTATGGAAGACGGAGTTCGGAAGAGACTGTGAGGGTGGAACCTACGCCTGTTATGGACAGGTACGAAGATGACCAAAGTGATTCTTCGTCGGTATGTAATGGAAATGAAAATGCGGAACAAACGGAAAACGAAGTTCCGGCGGAAGAAGCGCAGATTGTGAAGCAGACTCCCAGTGAATGTTCAACCGAAATCAAACAGGAAACCGAGGAAGAAAGGTGGGACTATTAA
Protein Sequence
MEFNQEQSSNNLVISSLSYKKSLKEFNYEQSSINLVISCLSYRTSSMEFNQEQSSINLVISSLSYKKSLKEFNYEQSSINLVISCLSYRTSSMEFNQEQSSINLVISSLSYKKSLKEFNYEQSSINLVISCLSYRTSSMEFNQEQSSINLVISCLSYRKSLKEFNHEQCSIGLVISCLSYSTSSMKFNKEQSSINLVISSLSYKKSLKEFNYEQSSIKLVISCLSYKTSSMEFNQEQSSNNLVISSISYKKSLKEFNYEQSSINLVISCLSYRTSSMEFNQEQSSINLVISCLSYRKSLKEFNQEQSSINLVISCLSYRTSSMEFNQEQSSINLVISCLSYRKSLKEFNQEQSSINLVISCLSYRTSSMEFNQEQSSINLDKSMEFNQEQSSNNLVISSLSYKKSLKEFNQEQSSINLVISSLSYKKSLKEFNYEKNSINLVISCLSYRTSSMEFNQEQSSINLVISCSSYRKSLKEFNHEQCSIGLVISCLSYRTSSMEFNQEQSSNNLVISSLSYKKSLKEFNQEQSSINLVISSISYKKSLKEFNQEQSSINLVISSISYKKSLKEFNYEKNSINLVISCLSYRTSSMEFNQEQSSINLVISCSSYRKSLKEFNHEQCSIGLVISCLSYRTSSMEFNQEQSSSNLVISSLSYKKSLKEFNYEKNSIHLITQLLEEVQRLRLSITKLQESSVSQVSRLEEELEQKRQHIARLEAKLDTQRDYEEIKRENSLLKSVSFNANHPNSKTVEELIDRSKNLPQQSENLDENPVQEIEGDEIAPSSTPHHTTTSPPTTSATPPSSLALPPLFHNVETFGSILGEEIAATWRRNIENITLNNRVIPSSPSTDAPPSKAVTPVAADSTEKSTASTPQPAEAASGPRSSPVEPLLNGSPKSPEDNNNQHVSNNNLPLAATMCAVNNFLRSDDSLKSPYRFDDHRSPYRFSDDLGMPPGTMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLNISRRVRELLSINNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWAVDENAIMLLKSLIPKKDNFSSGKETGIPTFGRPEGDFSEERIAHILNEASHLQMKPEDSHSNEDSKSPHAQCSSPFSKESSQNRKLKKYENDDIPQEKVVRIYQEELAKLMGRRIEDLRRDPFPSMFFPHMFSGGPMDRTQEEIRMALDAYHRELAKLNPCQNPAQMPNLGLLALQQQALAQHQHQQHQHQQQQQQHQQQQHPHQQPPSQQQPLNGGVQDLSLPKDKPKMMNGIDEKSAKDQDSMSHNSAFSLVRPKMEPGTPSQTASSTASSPLSNSILPPAMTPTEDFSTSAAASPLQRMASITNSLISQPPVQQHHSSSQRPLKAVLPPITQQQFDLYNNLNTEEIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGANPTISKPLPPTPKMLSEAAGLLNKMHESQSLLPPSLQMVANQNHSIPHSHAPTMLLTPPGIPPPHHMNLQSTDHMKKTNPSPLSISHSSLANQQVSSIRGLHPHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVERLQALKNERREANKRRRSTGPGTHDNSSDTSSNDTSEFYHSNSPGPGPQSAKKQRVLFSEEQKEALKLAFALDPYPNIATIEFLASELGLSCRTITNWFHNHRMRLKQQAPHGVPSDIPPRDQNASQAPFDPVQFRLLLNQRLLELSKERMGLSSVPLPYPPYLATNPNLAAFFSRGLLPTNELDLSALNNAVKDQMSGLDLSMTSLKREPDDFEDDVDSNMGSDDSNLSESTPEGIKSEPKETPSPSLGSNQGRSSRRKPAAPQWVNPEWQDEKEKQPTGNEVIINGVCVMQTEDYGRRSSEETVRVEPTPVMDRYEDDQSDSSSVCNGNENAEQTENEVPAEEAQIVKQTPSECSTEIKQETEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00030870;
90% Identity
iTF_00030870;
80% Identity
iTF_00030870;