Acya019746.1
Basic Information
- Insect
- Agrilus cyanescens
- Gene Symbol
- retn
- Assembly
- GCA_947389935.1
- Location
- OX376706.1:25285420-25298228[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-20 1.3e-16 62.2 0.0 13 89 175 249 171 249 0.94
Sequence Information
- Coding Sequence
- ATGAATTTAGCAATCCTGAAAAGTTCTACATTCACCACAGTCACCACTCATCAGTCCAAAAATTGGTTGGACAGACACCTCCATTTGTTCCTATCTTGGTCTAATTTTTGCTTTCTCCAAAAACTAGAAGATTTAGTATCCTCAACTATTATTGGAGGCCCTGGATGCTTGAGGATAGTGATGGAAAGGACCATTTTGGTCAGTCCACAAAATATATATATTTATCGGTTAGTGGTTGGTGATCTTAAGGAAACTAGGAAATTAGGGGATCCATTAAATGTGGGGTTTGGGTATTTGTCCAGTCCAGGGTGGTCAGCAAACAGTCAGTCAGGCAGGGCAGGGCAGGGCAGGGCAGGCAGTCAGGAGCAACATACATTGCAACAAATAATGCAACATGAAGGACATAAAATGTACTTTCATGTGCATTCCGACAAGCATGCTCGTAAAACTCCACCACCGGGACCGCCGCCGCCGCTTCAGCCGCCTCCGCGACATGGAGCAACAACTGATCCCCTCGTTGTTCTGTCACAACAGCGAACTCCAATAAATCGGTTACCAATAATGGCCAAATCAGTATTGGATTTGTATGAACTGTACAACTTGGTTATTGCCAGAGGGGGACTGGTAGATGTGATAAACAAGAAATTATGGCAGGAAATAATCAAAGGACTTCACTTACCATCTTCGATAACGTCTGCTGCATTTACGTTAAGGACACAATACATGAAGTACCTGTACCCGTACGAGTGTGAAAAAAGACGATTAAGCACCCCTGCGGAACTGCAAGCCGCGATAGACGGTAACCGAAGGGAAGGTAGACGAAGTAGTTACGGTCAATACGACAACGTCCAAAGATCACCCATTCCTTCCACCCAAATGTCACCCCTTACCCTCGTATCCCAACAGCAACAATTCGCTGCCCGTATGAACTCAGTGATGAGCGGAGGTGTTAGTTTACACAACGGTGCGCATCACCCGAGCCATCCCCAACCCATGAGTCAACCCCTAAACGGCGGACCCATCCCTGGTCTTGCTCCGAGCGAGTTCGAAGCCAGGATGATGGAGTACGTGAAATTATTAAACAAAGAAATGCGAAATTCAGCGGCGACGCCCCCAAGACAGGGAGACATGTCACCACCGAGTGCAACGTCACCTTTGAACCCTTTGGAAATGTCACGAATGACGCTCTGGAATTTGTACAATAATAACCATCAAGTTGTTCACGAACCTCAAAAGGAAGCTTTGAATCTCTCGGAACCGAATCAGATGCAATCGCCTCCTCATCTACCCCTCGTTAAGAGGGAATCCGAACGAGAATCTCCACCACCCGCTAAGAAATTCATAAAGGATGACGCAGAAAATAAACCACTTTCACCCGCAACACATATCAAAATTAATAGTCGAGGTGATGGTCGAGGTGCTGACAGTTCATTAGTGGTAAGTATGGAGTTAAACGGTATAACATACCAAGGGGTACTTTTTGCGCAATCGTCGCAACCGACGAGCCGAACAGCGCTCGCATCTTAA
- Protein Sequence
- MNLAILKSSTFTTVTTHQSKNWLDRHLHLFLSWSNFCFLQKLEDLVSSTIIGGPGCLRIVMERTILVSPQNIYIYRLVVGDLKETRKLGDPLNVGFGYLSSPGWSANSQSGRAGQGRAGSQEQHTLQQIMQHEGHKMYFHVHSDKHARKTPPPGPPPPLQPPPRHGATTDPLVVLSQQRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDNVQRSPIPSTQMSPLTLVSQQQQFAARMNSVMSGGVSLHNGAHHPSHPQPMSQPLNGGPIPGLAPSEFEARMMEYVKLLNKEMRNSAATPPRQGDMSPPSATSPLNPLEMSRMTLWNLYNNNHQVVHEPQKEALNLSEPNQMQSPPHLPLVKRESERESPPPAKKFIKDDAENKPLSPATHIKINSRGDGRGADSSLVVSMELNGITYQGVLFAQSSQPTSRTALAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -