Abig001990.1
Basic Information
- Insect
- Agrilus biguttatus
- Gene Symbol
- gata4
- Assembly
- GCA_963921985.1
- Location
- OY998117.1:41974095-41988779[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.9 1.9e+03 -1.2 0.6 7 22 63 78 62 78 0.85 2 3 8.2e-17 1.8e-13 50.1 3.3 1 34 189 221 189 223 0.97 3 3 2e-18 4.4e-15 55.2 4.9 1 34 243 275 243 277 0.98
Sequence Information
- Coding Sequence
- ATGGATTATTCGGTTTTACATCATTTGCTCACAACTTATGATTTTGTTTtagaaaaaatgataaaaagacCGCCGTCGACCGATCGTGATCAACAACAgcaaaaCCCTTTATACTCTCGTCAAGTTGCACCGTATTCGACGATGCCTTATTATAATACTACAGCCTCCCCTGATCTGGTTTCTCCAACGAATACGCAGTGTTGGTCTAATTCTGGTCAATCCACGCCAACGTTACAATTAACTGAAGATTATCCAAAAGTGTCTTCGTCTTCTGGTAATGGAGGAACAAATCCTCTTCCTGCATTTAGCAGATTGCCAACCTCGTACCATACACCAACACATTCAAGCCGATTTCAACCCTATTCATTCCCAAGTAGAGACACCGCAGCCAATTATGCTGATTGGCAATATTCGGAAACAGCGAATAGTCTTCAGTATGGACTTATGACCACTCCAACCATTCAAAGGGGTCGACAAGTAGCCCATAATGTCGCCCTTTCTGCTTCAGCATCTTTAACTGCAATTGATGCTAGAGCAGCGGAATATTTTACTGAAGGAAGGGAATGTGTAAATTGTGGGGCTGTTGATACACCCTTGTGGAGAAGGGACAACACTGGTCATTACCTTTGCAACGCCTGCGGCCTCTACCATAAAATGAATGGAATGAATCGACCCCTGGTCAAGCAGCCTCGCAGATTgTCTGCTTCTAGACGTGTTGGAATCTCGTGTGTGAATTGTACCACACGAACAACCTCGTTATGGAGGCGGAATGGCCACGGCGAAACAGTTTGTAACGCTTGTGGTCTTTACTATAAATTGCATGGAATTGACAGACCCAAATCGATGAAGAAAGAAAATATTCAGACCCGTAAGCGTAAACAGAAGGGGATGAAGGATGTTAGCGCTACTGGAACGCCGTTAAAAAATTCTGGCATTACTCTAAAGCAGGAGTTAGATAGTAGCAGCGATTTTCCGACTGACTTCCGGCCTATTGTTTGCTACAACCGTTTTCACGATACGTCAACTAACAGAACAAACTACGATGTCGTATATGACACCAATCAGAATCAAAAAATACCACCATATGCGGCAGTTTCTCAACATTCTCCTCAAATATCGCCTTACTACGACATTCTCCCTCATAATAATTGCCCGAGTCCTCCCTCTAAAACTTCATCGAGCCCTAATTCGCCCaacgtaaataataataacaatcacACTAATAACAATAACACGAAAGTTATAATCAATGGGGACCATAGTTTAGATAGACCAACAGTCGTATCTCTATCATCGTCATAG
- Protein Sequence
- MDYSVLHHLLTTYDFVLEKMIKRPPSTDRDQQQQNPLYSRQVAPYSTMPYYNTTASPDLVSPTNTQCWSNSGQSTPTLQLTEDYPKVSSSSGNGGTNPLPAFSRLPTSYHTPTHSSRFQPYSFPSRDTAANYADWQYSETANSLQYGLMTTPTIQRGRQVAHNVALSASASLTAIDARAAEYFTEGRECVNCGAVDTPLWRRDNTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGISCVNCTTRTTSLWRRNGHGETVCNACGLYYKLHGIDRPKSMKKENIQTRKRKQKGMKDVSATGTPLKNSGITLKQELDSSSDFPTDFRPIVCYNRFHDTSTNRTNYDVVYDTNQNQKIPPYAAVSQHSPQISPYYDILPHNNCPSPPSKTSSSPNSPNVNNNNNHTNNNNTKVIINGDHSLDRPTVVSLSSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00031471;
- 90% Identity
- -
- 80% Identity
- -