Abig001989.2
Basic Information
- Insect
- Agrilus biguttatus
- Gene Symbol
- pnr
- Assembly
- GCA_963921985.1
- Location
- OY998117.1:41959885-41965536[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-17 5.8e-14 51.7 2.4 1 35 365 398 365 399 0.97 2 2 9.6e-19 2.1e-15 56.3 4.2 1 35 421 454 421 455 0.98
Sequence Information
- Coding Sequence
- aTGGAAAGTAAGACAGTACAAGTCAAACAACCACTAGCGACTGGCGACGTAAAGAGCGAAggtgaaataaaaaatgaagaaaCTACGGAAACAGAACAACCATCTACGGTCATAATTAGGAGACAGGTCATAACGTCAGCTGGGACCATTGAAGAAGCATTAGAAAATGCCGCCTCAATCAAAGTCGAAGATGGGAACAAGAAAATTGTCAATAATGGCGCGACTGCAaccaataacaacaataataaaattatagaaGGTGCATCTAGAACGAATTCTCCGGAAAGAGTGCAACAAACAGAGGACAACAACAACCAGccacaacaaaattttgaactcGATCAGCAGCAACAACAAAAATCAAACGcacagcaacaacaacaacagcagcagcGATTGTTTAACGAACAAAACGTGATAACAACTACTGAACAATATGTAAATAACAACCAAGAATATAGGCCGGTTCCCGAACAAACCATGGAATATACCACCACTGTGGAAGTACCAACGGTTGGTACGATCCAGCATATCCAGATCGAAGGTACGACGTATGCAACAGCGGAAGCAGCCGCCGAAGATGCGAAACATGTGGAATATACAAATCTAGAAAGCGTCTCGTCCACCCAGTACCCAAACTCCCAACATTTTCCTCCAGATGGAAACCACCAGTACATTTCGCAAGGACAGTACCAGCAGCAACAACAATACCAAAGTTACACGGTCGCTAGGGAGAACGATGACAGTCCGCCAAATTCCTTGCTCTACAAGGATGATCCTAATCTGGCTTCATCAAGGATGTATcagGGCTCCTACGATTTGCAACCAGCTCAATCGACAAGTAACCAGGTGACCCTGATTGGTCACACGGGTACAAGTTACCAGTACACTGTACCAGCTAATCCAAGCAATTGGGGATCATCAAATAGCAGTAACACCGAATATGCTTCATATCCAGCGTCAAATGCCATAGGAATACATCAACCAGGAGAAAACATTTCATATCAAAATTACGCATCAAATGCTGCATGGGCTAACATGTCTTTGGAAGAAGGGTATGACCCATCTATCCAAGATGTTGACGTTAAAGAGTGTGTTAATTGTGGGGCTAGCATAACACCCCTATGGAGGAGGGATGGTACAGGACACTACCTTTGCAATGCTTGTGGGTTATATAACAGGATAAATGGGGTGAACAGGCCACCAGTAAGAACCACCAAGAAATTACCAACGAATGGAAACAGAAGAAGTGGGGTGTCCTGTGCGAATTGCAGAACATCCACCACGACCCTTTGGAGAAGAAATAACCAGGGTGAGCCTGTTTGCAACGCCTGTGGCCTATACTTTAAATTACATGGAGTGGATAGACCTCTAAGTATGAGAAAGGAAGGAATTCAAACACGAAAAAGGAAACCAAAAAGTTCCGGATCTAGTCAAAATCACATTTCTTCATTAGCGGGACCGCGAAGCATTAATATACAAAGGAACATGATGTTGCACAATCCTATTTATGCCACCGGTTTGGGTGCAGAACTAGGCGCATCGGCAGGCGAACAATATCAGTTTCCGATCACAGTAAGCCAAACAGTCTGTCGTATGCCCCTTCCCAGTGCTGATTTGTTAAGTCGACAGACCATTTCGAAtATACCACCCCTTGAACCGAATGTTATCCCACGAACGGTGGATGAACAAGCCAGCGTGATAACGTCAACATCGGTTGCTAGTGAATTGCACAGGACCGAATTCGGACAGACTGACGGGAATCAAACACCAAAATAA
- Protein Sequence
- MESKTVQVKQPLATGDVKSEGEIKNEETTETEQPSTVIIRRQVITSAGTIEEALENAASIKVEDGNKKIVNNGATATNNNNNKIIEGASRTNSPERVQQTEDNNNQPQQNFELDQQQQQKSNAQQQQQQQQRLFNEQNVITTTEQYVNNNQEYRPVPEQTMEYTTTVEVPTVGTIQHIQIEGTTYATAEAAAEDAKHVEYTNLESVSSTQYPNSQHFPPDGNHQYISQGQYQQQQQYQSYTVARENDDSPPNSLLYKDDPNLASSRMYQGSYDLQPAQSTSNQVTLIGHTGTSYQYTVPANPSNWGSSNSSNTEYASYPASNAIGIHQPGENISYQNYASNAAWANMSLEEGYDPSIQDVDVKECVNCGASITPLWRRDGTGHYLCNACGLYNRINGVNRPPVRTTKKLPTNGNRRSGVSCANCRTSTTTLWRRNNQGEPVCNACGLYFKLHGVDRPLSMRKEGIQTRKRKPKSSGSSQNHISSLAGPRSINIQRNMMLHNPIYATGLGAELGASAGEQYQFPITVSQTVCRMPLPSADLLSRQTISNIPPLEPNVIPRTVDEQASVITSTSVASELHRTEFGQTDGNQTPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00031470;
- 90% Identity
- -
- 80% Identity
- -