Abig007717.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrilus biguttatus
Gene Symbol
ZNF236
Assembly
GCA_963921985.1
Location
OY998120.1:25561438-25568189[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.00027 0.019 15.7 5.6 1 23 120 142 120 143 0.96
2 26 0.00054 0.038 14.7 1.5 1 23 148 170 148 170 0.98
3 26 0.00053 0.037 14.8 0.3 3 23 177 197 176 197 0.97
4 26 0.0024 0.17 12.7 0.1 1 23 203 225 203 225 0.97
5 26 0.14 10 7.1 0.7 2 23 242 263 242 263 0.95
6 26 0.002 0.14 13.0 4.2 1 23 287 309 287 309 0.98
7 26 4e-06 0.00028 21.4 0.5 1 23 315 337 315 337 0.98
8 26 0.00095 0.067 13.9 1.4 1 23 343 366 343 366 0.93
9 26 0.027 1.9 9.4 1.5 1 23 376 399 376 399 0.97
10 26 1.2e-06 8.7e-05 23.0 0.8 1 23 492 514 492 514 0.98
11 26 5.2e-05 0.0036 17.9 2.0 1 23 520 542 520 542 0.99
12 26 0.0012 0.083 13.6 0.4 1 23 548 570 548 570 0.99
13 26 6.1 4.3e+02 2.0 0.2 2 23 587 609 586 609 0.72
14 26 0.1 7.3 7.5 7.2 1 23 656 678 656 678 0.96
15 26 0.00012 0.0084 16.8 1.4 1 23 684 706 684 706 0.97
16 26 0.00094 0.066 14.0 1.2 1 23 712 734 712 734 0.94
17 26 0.0018 0.13 13.1 3.9 1 23 740 762 740 762 0.98
18 26 0.0046 0.32 11.8 2.9 1 23 768 790 768 790 0.97
19 26 0.023 1.6 9.6 6.9 1 23 1104 1126 1104 1126 0.96
20 26 3.9e-06 0.00027 21.5 1.6 2 23 1133 1154 1133 1154 0.97
21 26 5.3e-05 0.0037 17.9 2.8 1 23 1160 1182 1160 1182 0.99
22 26 0.00038 0.027 15.2 1.1 1 23 1190 1212 1190 1212 0.97
23 26 0.0019 0.13 13.0 1.2 1 23 1218 1240 1218 1240 0.98
24 26 8.2e-05 0.0058 17.3 3.0 1 23 1392 1414 1392 1414 0.98
25 26 0.021 1.5 9.7 1.0 1 23 1419 1441 1419 1441 0.96
26 26 0.027 1.9 9.4 0.3 1 22 1447 1468 1447 1468 0.95

Sequence Information

Coding Sequence
atgcaaATGGATTCTCAAATAGCAATTAACAAAGAAGATAATATTGATAAGCAGAACCAATCATTTAGTTACATAGCAATTCCTATTGATGCTCTAGATTTATCAAATCAAGAAGTTCAAGCTtttctttcacaaaatattataGTAAAATCGTTACCagacaataaattttgtgttgTAGAAACTCAGaATGCCATCCGACCTAGTGTAATTGAATATAGTAGTAATTCCGATCCAACTGACTTACTTCAAGACACACAGATTACACTTTCTACTTCAGAGAACAACAACATCCTACAACAAGAACTAGTACAAAATATAAATCCCAAATATGTTCAaaacaagaagaaaaaaaagtttCAGTGCAATATTTgttcaacaaaatttaaaaattctcaGTACTATCAAAATCACATGCAACAACATCACAGAAAGAAGAAGTATAAATGTGATCACTGTTCTGCTAGCTTTAATGTACAGGATAATTTCATGATACATAAAGCAATGCATACTAAAGGCGAACCTGCTTGTCCTTTGTGTGATAGAAAATTTCAAAGATTAGCAAGTCTTAAGTCACATCTTCTTTTACATCAAATTGAAGAAACATTTACATGCAGTGATTGTCAATTAGAATTCGAAAATGAGGACGAATTTAATGACCATGTAGCTAGTCATTTAAGTGACTTAATATCCAACAAAACAGAAGGAACAACAATGAAACGAGTTTGCAGTTACTGCAATTCTAATTTTGAATCATACAAAGAGTATAAAGAACATGTTTCTTATCATATAAAGGTAAACCGGTTACTACATAATGTaaagaaaagtaaaagaaaaacaaataataaagaatACCAACACAAATGTGAGGTATGCCAAAAAAGTTTTCCGAAAGTTTGTCTGCTAGAACGACATTTTAGAATACACAGTGGTGAAAAACCTTTTGttTGTAAAGAATGCAATCGTGGTTTTGCTCAAAAAGGAACATTGCAGATTCATATGTCAAAACATACAGGAGTTAAACCATTTTTATGTACATTATGTCCTGCCAGATTTTGTCAAAAAGgGAATCTTCGAGTTCATGTAGAGAAAACCCATACTGTAGCACAACCTGGTGAGAACATGTACAAATGTAGCTTATGTTCTtgcatttttaaaaaagttgcaTCTTTAAATGGTCATATAACTAGAATACATTCAGGTAAAAAATACGACGACATCTCAGCAGTTTTACATCAGTTAAAAGAACTTGAAAAACAAACATGTGGTAAAACAAACaatgaaagtaaaaaaaaagattcAGTAGTTGCGTCGGAACCAGACCTAAATCTGAATTCATTTCAAACGGATATCGAGAGGAATAATTCTGAAGATAAAGTAGATTTTAAGTATGTTACATTGACTGAATCAATTGGGGGCGAAACGGTGAGGAATTATGAAGTTAAGCAGAGGAAAGTAGGGGACGTTCGATGGTATGTTTGCTCGTTTTGTACCAAAGAGTTTAAAAAACCGTCCGACCTTCTTCGTCATATAAGGGTTCATACTCGTGAAAAACCTTACTCATGTGACATATgcaaacaaaaattttcattGAAGTCTACGTTATCTACACACTTAAATACTcatgtaaaagaaaaattatacaAGTGTAAAATTTGCGATAGATTACTTCCAACCGCTAAGGCCTTATATGTTCATACCAGacGCCACGAAAGGGGAGAATTGAGtaacgaaaaacaaaaagagAAACATGTCTCCACATGCAATATATGTAAACGTTCTGGTTTTCAAAACGAATTAGAATTGAAAGTACATATTGAAGAGCATAAAAAAGATCAACACAACGGTGGTGGGGTTAATGATAATCAAAATAAACAACCATTATTATTGACACCAGAAGgatTACTTCCGGTAGATGCTGTAAAATCAAGGAACTTGAACCTTTCCAGGAACAAAATTAAACCTCACATATGTTCAGTTTGTTGCGCATCGTTTTCGAGAAAAGTACACCTTAAGAGACACTTTTTGACCCATACTGgtgaaagaaaatttaaatgcGAAATATGCCCTAAGTCTTTTTATACTACGTATGCCATGAACGAGCACCTCAAGTTCCACTACAACATCAAAAATCATGCGTGTAAAATTTGTGGAAAACGTTTCGTGACGAGGGCTATTTTAAAGAGACATTCGGTAACGCATTCTACACAAAAGCCATACTTCTGCCCTATTTGTAGTAAACAGTTTAAAACGATTTCATTGTGTAGAAAGCACATGTTGACCCATTCGACTGAACGTCCTTTTGCTTGTTCTTATTGCGAAAAAACCTTTAAGACCGTTTCTATGTGTCGGGACCACATcaaaatacacaaaaaacaaaatgaaaaaGACTTGCCGGATTTTATTCGAATAATTCCAAGTGGTGATATAAAAGGAGGGGAAAGCCATAAtactaaaaatgaaataattctgAATGCAGTTAATTCAAATGTACATAATCTGAATCCAAGTTCTATTTCTACAACAAATATAGgtgatataataaattcttcAGGAATTGTAACAGCAGAAGTTCTCCTTGATAATCAAAAAAACCAAGAAGATCAAATTCCAATGTTGTTACAAATTGAGAAAGTTCAAAATTCTGatcaaattcaaataaataataatattccttTGGAAAATAATTCAAGTATccaaacaatttttattgattatgATGATTTTCAAATGCGTTTATTGCCAAACTATAATTTTCTTACAACTGATTTCTCACAAGTAAAGGGGGGAAACGATGAAACACAGAACAATCTAGAGCAATCCAATATTTTGTTGTCAATTGATCCAGctttaaatcaaattaatgaagGAAATACAGACACTTTTCTTACTGCAAATGTAGCAAGCATAGCTGCAACTGATTTAgttgaaattcaaaattcagGCATCGAACAATCGGAACAATTACAGTCTCAAAACTTTGATAAAATTGTAGTGACAGAAAACGTGAGTGATCTTACATTATCTCATCACAATGTTGCCTTGTTTGGTGCAGAAGATTTTACAGATTATGGTATCCACGTTGCACCGTCTGAAATTATAACTGACAAAATTACAACCAGCGCATTAAAGGATTTAAAAGCTCAATGTTCTCcagtaaatacaaaaagtacaGAAGAATCATCTCAATTAAATGATAATGACAATCCATCGGAACAGAACGCCCAAGagAATAACGAAGCAATTCCAGAAGAATTACATACAGAAAAAGATATTTATTATcgaagaaacaataaaaaatcaacaatttATCAATGTACCTCCTGTTATAGAACATTTACTAAAAAGAGCACGTTTGTTAAACATCATGACTATCATAGGAAAAAGCAGGACAATGTATGCAAGTTCTGTTCAAAGATGTTTAAGAAACCATCTGATCTTGTGAGACATTTGAGAACCCATACAGGAGAACGCCCTTTTCAATGCTCACAGTGTGAAAAAAGCTTTTCGTTAAAATCGACCCTCGATTCCCATTACAAAACCCATAAACCCGGAGGTCATAAAGAGTTTAACTGTCTTGTCTGCAATTCTTACTTCAGCTCTAAATCGAGCTTAAAAGTACACATGTTACTTCACACTGGAGCGAAACCCTATTCCTGTCCTTCGTGTCCTTTAAAGTTTCGTACTACAGGACAAAGGCAGTCGCATATTAAAAAACACACGAAGGAAGGAAATAAAGAGGATAAAATTACAAATGGCAAGTCAAAATCGTCAAAAAGAAAATTAGCAACATTGGCTTTAGAGGCAGCACAACTTCAAGAAATCACAGAAGCTTGCCCAGATAAAGAAAGCCAAGTGTTAACAAATGAGCAAACTGGTAGGAGTGTAAAAACAATTTCAGAACAACAAAGCAATAAATATAGCAATAAAGCAATTGAAATGGATACTTTATTTTATCAGTTGGATTTTGAAGGAAACAGTTATATCCATGAAAACTTAGGAACCATCCCAATCTCTTTCATTCAACTCGATGACGACAATCTTTTAAGGATAAGATTGGCCCCCACTGATAGCCAACTGATAGGTGTATCAGATTTACTTTTAACTGATACGTCGGTAGAACCAGTTTCCGCTCAGCAAACagtcaataatcaaacaaatAATGTGAACGATTTTACTTGCTctatatgtaagaaaaaattgaagaatCAAAAGGTCTTAAAAAAGCACATGAAAATTCACGAAAGAAAGAAGTATTTCTGTGATAAATGTGCAAAAATGTTTGCATTTGAACATGAACTGATTGAACATAACCAAATCCATAATGGTATCAAGAGGTTTCCATGCAATTTTTGTGCTAATAAATTTGATACGGATGCAAATCTCAAAATACATATGAAGAGGTAA
Protein Sequence
MQMDSQIAINKEDNIDKQNQSFSYIAIPIDALDLSNQEVQAFLSQNIIVKSLPDNKFCVVETQNAIRPSVIEYSSNSDPTDLLQDTQITLSTSENNNILQQELVQNINPKYVQNKKKKKFQCNICSTKFKNSQYYQNHMQQHHRKKKYKCDHCSASFNVQDNFMIHKAMHTKGEPACPLCDRKFQRLASLKSHLLLHQIEETFTCSDCQLEFENEDEFNDHVASHLSDLISNKTEGTTMKRVCSYCNSNFESYKEYKEHVSYHIKVNRLLHNVKKSKRKTNNKEYQHKCEVCQKSFPKVCLLERHFRIHSGEKPFVCKECNRGFAQKGTLQIHMSKHTGVKPFLCTLCPARFCQKGNLRVHVEKTHTVAQPGENMYKCSLCSCIFKKVASLNGHITRIHSGKKYDDISAVLHQLKELEKQTCGKTNNESKKKDSVVASEPDLNLNSFQTDIERNNSEDKVDFKYVTLTESIGGETVRNYEVKQRKVGDVRWYVCSFCTKEFKKPSDLLRHIRVHTREKPYSCDICKQKFSLKSTLSTHLNTHVKEKLYKCKICDRLLPTAKALYVHTRRHERGELSNEKQKEKHVSTCNICKRSGFQNELELKVHIEEHKKDQHNGGGVNDNQNKQPLLLTPEGLLPVDAVKSRNLNLSRNKIKPHICSVCCASFSRKVHLKRHFLTHTGERKFKCEICPKSFYTTYAMNEHLKFHYNIKNHACKICGKRFVTRAILKRHSVTHSTQKPYFCPICSKQFKTISLCRKHMLTHSTERPFACSYCEKTFKTVSMCRDHIKIHKKQNEKDLPDFIRIIPSGDIKGGESHNTKNEIILNAVNSNVHNLNPSSISTTNIGDIINSSGIVTAEVLLDNQKNQEDQIPMLLQIEKVQNSDQIQINNNIPLENNSSIQTIFIDYDDFQMRLLPNYNFLTTDFSQVKGGNDETQNNLEQSNILLSIDPALNQINEGNTDTFLTANVASIAATDLVEIQNSGIEQSEQLQSQNFDKIVVTENVSDLTLSHHNVALFGAEDFTDYGIHVAPSEIITDKITTSALKDLKAQCSPVNTKSTEESSQLNDNDNPSEQNAQENNEAIPEELHTEKDIYYRRNNKKSTIYQCTSCYRTFTKKSTFVKHHDYHRKKQDNVCKFCSKMFKKPSDLVRHLRTHTGERPFQCSQCEKSFSLKSTLDSHYKTHKPGGHKEFNCLVCNSYFSSKSSLKVHMLLHTGAKPYSCPSCPLKFRTTGQRQSHIKKHTKEGNKEDKITNGKSKSSKRKLATLALEAAQLQEITEACPDKESQVLTNEQTGRSVKTISEQQSNKYSNKAIEMDTLFYQLDFEGNSYIHENLGTIPISFIQLDDDNLLRIRLAPTDSQLIGVSDLLLTDTSVEPVSAQQTVNNQTNNVNDFTCSICKKKLKNQKVLKKHMKIHERKKYFCDKCAKMFAFEHELIEHNQIHNGIKRFPCNFCANKFDTDANLKIHMKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00032216;
90% Identity
-
80% Identity
-