Basic Information

Insect: Agrilus biguttatus
Gene Symbol: -
Assembly: GCA_963921985.1
Location: OY998121.1:24278795-24291137[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0051 0.36 11.6 2.6 1 23 729 751 729 751 0.98

2 21 6.8e-06 0.00048 20.7 1.6 1 23 757 779 757 779 0.99

3 21 0.00074 0.052 14.3 7.2 1 23 785 807 785 807 0.98

4 21 0.00071 0.049 14.4 1.8 1 23 818 840 818 840 0.98

5 21 0.0014 0.1 13.4 4.9 1 23 846 868 846 868 0.97

6 21 1.2e-06 8.3e-05 23.1 0.9 1 23 874 896 874 896 0.99

7 21 0.0034 0.24 12.2 2.2 1 23 998 1020 998 1020 0.94

8 21 3.3e-05 0.0023 18.6 1.3 1 23 1054 1076 1054 1076 0.99

9 21 6.7e-06 0.00047 20.7 2.3 1 23 1082 1104 1082 1104 0.96

10 21 1.8e-06 0.00013 22.5 0.3 2 23 1111 1132 1110 1132 0.97

11 21 8.5e-05 0.0059 17.2 2.1 1 23 1138 1160 1138 1160 0.99

12 21 0.00035 0.025 15.3 1.4 1 23 1166 1188 1166 1188 0.95

13 21 0.0017 0.12 13.2 3.8 1 23 1195 1217 1195 1217 0.98

14 21 0.0017 0.12 13.2 0.9 1 23 1223 1245 1223 1245 0.99

15 21 0.00061 0.043 14.6 1.2 1 23 1251 1273 1251 1273 0.97

16 21 2.8e-05 0.0019 18.8 2.1 1 23 1279 1301 1279 1301 0.98

17 21 0.00011 0.0075 16.9 0.8 1 23 1307 1329 1307 1329 0.98

18 21 3.8e-05 0.0027 18.3 3.0 1 23 1335 1357 1335 1357 0.98

19 21 0.00014 0.01 16.5 3.3 1 23 1363 1385 1363 1385 0.98

20 21 5.2e-05 0.0037 17.9 1.6 1 23 1391 1413 1391 1413 0.99

21 21 6.6e-06 0.00046 20.7 5.5 1 23 1419 1441 1419 1441 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0051	0.36	11.6	2.6	1	23	729	751	729	751	0.98
2	21	6.8e-06	0.00048	20.7	1.6	1	23	757	779	757	779	0.99
3	21	0.00074	0.052	14.3	7.2	1	23	785	807	785	807	0.98
4	21	0.00071	0.049	14.4	1.8	1	23	818	840	818	840	0.98
5	21	0.0014	0.1	13.4	4.9	1	23	846	868	846	868	0.97
6	21	1.2e-06	8.3e-05	23.1	0.9	1	23	874	896	874	896	0.99
7	21	0.0034	0.24	12.2	2.2	1	23	998	1020	998	1020	0.94
8	21	3.3e-05	0.0023	18.6	1.3	1	23	1054	1076	1054	1076	0.99
9	21	6.7e-06	0.00047	20.7	2.3	1	23	1082	1104	1082	1104	0.96
10	21	1.8e-06	0.00013	22.5	0.3	2	23	1111	1132	1110	1132	0.97
11	21	8.5e-05	0.0059	17.2	2.1	1	23	1138	1160	1138	1160	0.99
12	21	0.00035	0.025	15.3	1.4	1	23	1166	1188	1166	1188	0.95
13	21	0.0017	0.12	13.2	3.8	1	23	1195	1217	1195	1217	0.98
14	21	0.0017	0.12	13.2	0.9	1	23	1223	1245	1223	1245	0.99
15	21	0.00061	0.043	14.6	1.2	1	23	1251	1273	1251	1273	0.97
16	21	2.8e-05	0.0019	18.8	2.1	1	23	1279	1301	1279	1301	0.98
17	21	0.00011	0.0075	16.9	0.8	1	23	1307	1329	1307	1329	0.98
18	21	3.8e-05	0.0027	18.3	3.0	1	23	1335	1357	1335	1357	0.98
19	21	0.00014	0.01	16.5	3.3	1	23	1363	1385	1363	1385	0.98
20	21	5.2e-05	0.0037	17.9	1.6	1	23	1391	1413	1391	1413	0.99
21	21	6.6e-06	0.00046	20.7	5.5	1	23	1419	1441	1419	1441	0.98

Sequence Information

Coding Sequence: atgtttttacaagaagaaatatccAGTTCTCCAGTGAAAAGTGAATTATTTCAAGATAACTACAATAGTGATGGAACTTGGCGTATTTCTGatgaaaataatagaacaaatGAGCTTTTAAATTTACGTGATATAAAAGAAGAAACCAATATTAAAAAGGAAGTAGtagatgatatttttttaagtgaaattgATCTTACTAGCAGAACATGGTGTTTTTCTGATAAAGAAGATAATAGAAAAACTGAGCTTTTAAAGTTAGATgatataataaaagaagaaacgGTGTTAAAAAAGGAAGTTCTAAATAATACTTCTGAATGTAAAATTGAGCTTACTGACAGAACATGGTATTTTTCTGATAAAGATGATAACAGAGAAACTAAGCCATTAAAAATAGGTgatataataaaagaagaaactGTTTTAAAGAAGGAAGTACTAATTAATACTTCTGAATGTGAGATCAAGCCTACTCACAGAACATGGCATTTTTCTGATAAAGAAAATAACAGAGAAACTAAGCCTTCAAAATTGGACGATACAATAAAAGAAGAAACCAACATAAAAAAGGAAGtagtagataatatttttttaagtgaaattgATCTTACTAACAGAACATGGTGTTTTTCTGATAAAGAAGATAATAGAAAAACTGAGCTTTTAAAGTTAGATgatataataaaagaagaaacgGTGTTAAAAAAGGAAGTACTAAATAATACTTCTGAATGTAAAATCGAGCTTACTGACAGAACATGGTATTTTTCTGATAATGAAGATAACAGAGAAACTAAGCCTTTACAATTGGATgatataataaaagaagaaactgttttaaaaaatgaagtaCCGAACAATACTAACCAATGTAAAATCGAGCTTACTGACAGAACATGGTATTTTTCTGATAATGAAGATAACAGAGAAACTAAGCCTTTACAATTGGATgatataataaaagaagaaactGTTTTAAAGAAGGAAGTACTAATTAATACTTCTGAATGTGAGATCAAGCCTACTCACAGAACATGGCATTTTTCTGATAAAGAAAATAACAGAGAAACTAAGCCTTCAAAATTGGACGATACAATAAAAGAAGAAACCAACATAAAAAAGGAAGtagtagataatatttttttaagtgaaattgATCTTACTAACAGAACATGGTGTTTTTCTGATAAAGAAGATAATAGAAAAACTGAGCTTTTAAAGTTAGATgatataataaaagaagaaacagTGTTAAAAAAGGAAGTACTAAATAATACTTCTGAATGTAAAATCGAACTTACTGGTAGAACATCGCATTTTTCTGATAAAGAAGATAATAGAAAAACTGAGCTTTTAAAATTTGATgatataataaaagaagaaacaattttaaaaaaggaattattgAATAATACTTATGAATGTAAATTCGAGCTCTCTAACAAAAGATGCGATTTTTCTGATGAAGATAACAGAGAAACTAAGTCGTTACAATTAAATGacataataaaagaagaaactattttaaaaaaggaattagtGAATAATACTTCTGAATGTAAAATCAAGCTTACTGACAGAACATCGCATTTTTCTGATAAAGAATGTAATAGAAAAACTGAGCTTTTAAAATTTGATgatataataaaagaagaaacaattttaaaaaaggaattattgAATAATACTTATGAATGTAAATTCGAGCTCTCTAACAAAAGATGCGATTTTTCTGATGAAGATAACAGAGAAACTAAGTCGTTACAATTAAATGacataataaaagaagaaactattttaaaaaaggaattagtGAATAATACTTCTGAATGTAAAATCAAGCTTACTGACAGAACATCGCATTTTTCTGATAAAGAATGTAATAGACAAACTaaactttcaaaattaaataacataataGAAGATAAAACcgttttaaaaaaggaattattaaataatacctTTGAATATAAAATCGAACTTACTGACAGAAGATCGCATTTTTCTGATAATGAGGATAATAGACAAACTGAGCTTCTAAAAGTAGATgatataataaaagaagaaactGTTTTAAGAAAGGAAGTATTAAATAATACTTCTGAATGTAACATGGAATCTAATTTAAACAATGACAAAATTCCAGATTTAACTAAGTTTACTTCCATTCAGTCAAATCtatttaaatgtgttttttgtcaACAAGTTTGCAGTTCAAAATTAGACCTAAATAGTCATATGGATTCTCACAGCAACAGAATAATATATAAATGCGATTTATGTGAAAGAACCTTTACTTCTAAAGGCAACTATTCTCGTCATGTTAAAATTCATACAAGAGAAAAGCTACATAAATGCACAAAATGtgataaaacttttaattacaAATGTAGATTAAATGTTCATATTTTAACACATGATAATAACTTCAAAATGGAAGAAAAACCATTCAAATGTGAAACCTGTGAACAAAGATTTTATGAAAAAGGTACCTTAATGAATCATCAAAAGTTGCATGCGAGCGAACGTCCACATGAATGTCTGACTTGCGGCAaacgtttcactaaaaaatGTAATATGGTTAGTCACGTTCGTATCCATACCGGAGAAAAACCGTACGAGTGTCAAGTATGTCAGAAAAGGTTTCCCGATAAATTCCAACTAAATCTACATATGCGCGTTCATACGGGGGAAAAACCGTACgaatGTGatataaaagaagaaactaATAtaaagaaggatgtaaaaaataatatttttgtaagcGAAATTGAGATTAACAGACCAAGGCGTTATTCTGAAAAAGAAGATAATAGTAAAACTGAGCTTTTATATTCAGGTGAtctaataaaagaagaaatcatTATAAAAAAGGAACTAATAGATAATTCTGAAGATGAAATTGAGCTTAATATAGACAATAAAACTGCAGGTTTAACTGAATTTACTTGTGTGAAGTCAAAgcaatgtaaatgtaaattatgtTCATTCAATTGTGAAACTTGTGGGCAGAGATTTACTGAACAAAGTAATTTGAGATGTCATGAATTGGTGCATAAGGGCGAACATCCATTGGAATGTCCAATTTCCAGTAAACGTTCTGTCACAAAATTGAATTGGATCAGTCACATTCGTGCCCATACCGAAGAAAAACCATACCAGTGTCTAGTATGTCAGAAAAGGTTTCCTGAAAAATACTATATCAATCGACATATGCGTGTTCACACTGGAGAAAAACCATTCAAATGTGAAACCTGTGGACAGAGATTTACTGAAaaAAGTAATTTGAGGCGTCATGAAATGTTTCATACGGGTGAACGTCCATTGGAATGTCCGATTTGTGGCAAACGATTCGTTATAAAATCGAATTTGACCACTCACTTTCGTATCCATACCAGAGAAAAATCATACGAGTGTCAGGTGTGTCATAAAAGGTTTCCCGAAAAATACTATCTCCCTCGACATATGCGCATTCATACTGGAGAAAAGCCATTCAAATGTGAAACCTGCGGACAGAGATTTAGTGAAAAGAGTAATTTGAGGTTTCATGAAATGGTGCATACCGAAGAAGAAAAACAGCACGAATGTCAAGTGTGTCAGAAAAGGTTTCCCGAAAAACACAGTTTCGATTTACATATGCGCATTCATGAAAGGGAAAAACCGTACAAATGTCAAGTGTGTCAGGAAAAATTTTCCGAAAAACAGTATATCGACCTACATATGCGGGTTCATATGCAAGAAAAGCCATTCCATTGTGAAACCTGTGGACAGGGATTTAATCAAAAAAGAGGTTTGAGGCTTCATGAAATGGTGCATACTGGCGAACGTCCATTTGAATGTCCGATTTGCAGCAAACGTTTCATCAGAAAATCGGACTGTAACAATCATATTCGCATTCATACCGGAGAAAAACCGTACGAATGTGAAGTGTGTCAGAAAAGGTTCCCAGAAAAATACTATCTCGATCGACATTCGCGCGTTCATACGGGAGAAAAGCCATTTAAATGTGAAACCTGTGGACAGAGATTTACTGAAAAAGGTAGCTTAATGCATCATCAAAAGTTGCATACCGGCGAACGTCCATTTGAATGTCCGATTTGCGGCAAATGTTTCGTCAAAAAATCGGACTGTAGCAGTCACGTTCGCATCCATACCGGAGAAAAACCGTACGAGTGTCAAGTGTGTCAGAAAAGGTTTCTCAAAAAATACCAACTCAATGTACATATGCGCGTTCATACGGGGGAAAAACCGTACgaatgtaaaatttgttttcgAAGATTTTCGCATAATTCATCTCTTAATAAACACATGTTCACCCATACATAA
Protein Sequence: MFLQEEISSSPVKSELFQDNYNSDGTWRISDENNRTNELLNLRDIKEETNIKKEVVDDIFLSEIDLTSRTWCFSDKEDNRKTELLKLDDIIKEETVLKKEVLNNTSECKIELTDRTWYFSDKDDNRETKPLKIGDIIKEETVLKKEVLINTSECEIKPTHRTWHFSDKENNRETKPSKLDDTIKEETNIKKEVVDNIFLSEIDLTNRTWCFSDKEDNRKTELLKLDDIIKEETVLKKEVLNNTSECKIELTDRTWYFSDNEDNRETKPLQLDDIIKEETVLKNEVPNNTNQCKIELTDRTWYFSDNEDNRETKPLQLDDIIKEETVLKKEVLINTSECEIKPTHRTWHFSDKENNRETKPSKLDDTIKEETNIKKEVVDNIFLSEIDLTNRTWCFSDKEDNRKTELLKLDDIIKEETVLKKEVLNNTSECKIELTGRTSHFSDKEDNRKTELLKFDDIIKEETILKKELLNNTYECKFELSNKRCDFSDEDNRETKSLQLNDIIKEETILKKELVNNTSECKIKLTDRTSHFSDKECNRKTELLKFDDIIKEETILKKELLNNTYECKFELSNKRCDFSDEDNRETKSLQLNDIIKEETILKKELVNNTSECKIKLTDRTSHFSDKECNRQTKLSKLNNIIEDKTVLKKELLNNTFEYKIELTDRRSHFSDNEDNRQTELLKVDDIIKEETVLRKEVLNNTSECNMESNLNNDKIPDLTKFTSIQSNLFKCVFCQQVCSSKLDLNSHMDSHSNRIIYKCDLCERTFTSKGNYSRHVKIHTREKLHKCTKCDKTFNYKCRLNVHILTHDNNFKMEEKPFKCETCEQRFYEKGTLMNHQKLHASERPHECLTCGKRFTKKCNMVSHVRIHTGEKPYECQVCQKRFPDKFQLNLHMRVHTGEKPYECDIKEETNIKKDVKNNIFVSEIEINRPRRYSEKEDNSKTELLYSGDLIKEEIIIKKELIDNSEDEIELNIDNKTAGLTEFTCVKSKQCKCKLCSFNCETCGQRFTEQSNLRCHELVHKGEHPLECPISSKRSVTKLNWISHIRAHTEEKPYQCLVCQKRFPEKYYINRHMRVHTGEKPFKCETCGQRFTEKSNLRRHEMFHTGERPLECPICGKRFVIKSNLTTHFRIHTREKSYECQVCHKRFPEKYYLPRHMRIHTGEKPFKCETCGQRFSEKSNLRFHEMVHTEEEKQHECQVCQKRFPEKHSFDLHMRIHEREKPYKCQVCQEKFSEKQYIDLHMRVHMQEKPFHCETCGQGFNQKRGLRLHEMVHTGERPFECPICSKRFIRKSDCNNHIRIHTGEKPYECEVCQKRFPEKYYLDRHSRVHTGEKPFKCETCGQRFTEKGSLMHHQKLHTGERPFECPICGKCFVKKSDCSSHVRIHTGEKPYECQVCQKRFLKKYQLNVHMRVHTGEKPYECKICFRRFSHNSSLNKHMFTHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -