Abig004495.1
Basic Information
- Insect
- Agrilus biguttatus
- Gene Symbol
- bab2
- Assembly
- GCA_963921985.1
- Location
- OY998119.1:506846-508790[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-15 4.7e-12 45.7 0.1 3 45 363 405 361 405 0.92
Sequence Information
- Coding Sequence
- atgaGTGCGACGGGTCAGCAATATTGCCTCCGATGGAACAATCATCGGACAAATCTACTATCTGTGTTCGATGAACTTTTACAAAATGAGTCTTTTACGGACGTGACTCTTGCTTGTGATGGAGGAAATCCCGTAAAGTGCCATAAAATGGTCCTGGCTGCTTGCTCACCTTATTTCCAAGCCCTTTTCACTGGCTTGCCATGTAAACACCCAATTGTAGTACTCAAAGATGTAAAATACTCAGAAATTAAAGCAATATTGGAATACATGTACAGAGGTGAGGTAAATGTTGCTCAAGATCAACTAGCAGCTTTACTTAAAGTTGCCGAAGCCCTTAAAGTGAAAGGCCTTGTTGAGGAAAATAGGAGTGGAGAACCTAATGTTTTTGGAAGAGACAAAGACGAAGAATCCCTTTCTCAACATTCATCGCCTTCtATAAGCACAACTAGCGCAAATATTCAGATAGCGCAAAGTACTAGTTCGTCTTCTCCACCTCATTCTACAAATACAATTCAGTATTCAAAGAATTACAATATATACAACAAATCGAGTGTCGAACGAAATTCCAGAATGAATCTCCCCATGTGGGCAGTACCTGGGTTACCGCTGCCACATCACCCAACCCCTATACCTCCTCAAAGTCACCCCCATGCTGCAGCAACAGCGGCTGCTGCAATGCTAAGCACTTGCTACGAAGCTGCAGCTACAGACATGTCACCACTCAAACGAAAAAAGTTGTCTAGCTTACTAATGAATAGGGATACTCCTATTTTACGAACGGTCTTGGGTCAAGGTCAGGTTGAATCGTCCGAACCCGTGAGTCTCGTCTGTCATTCCGAAAATCACAGTTCACCAGGAAATGGCTCAGAACAGGAATCTTCAGATAAGCTTATGAAGAATGAACCTTCTGAAGATGCTCAATCTCCTTACACTGATTTCGCCATGATGGACGATGAAGATAAATCAAGACCCGCTGTACCCTCAACGTCCCCTCAATCTTACACAAACGAGCTACGATCTTCTGGAATAGCGACATACGTGCCTGCTCAAAAACCAGAATGGAAACGTTACAAACAATACACGCGAAACGACATAATGTCAGCGATAGAAGCTGTTCGAAATGGTATGAGTGCCTTGCAGGCTGCGAGAAAGTACGGAGTTCCGTCTAGAACGCTTTATGATAAAGTTAAGAAACTGGGCATAACGACAAGCAGACCGTTCAAAAGGGGTTCAAATGGTAGTAGTGGCTGCTTTCCGTACGGTATAAGTGGTACTAGTTCACCTTATGGGGCCCTTTCGGAAAATGAAGATCCTGGTGCAAGTAATCATCCAGCTTTATTGGAAGCAAGTCATTTTTTACATGCTCTTGATGGGAGAGGAAATGAAGAAAGGGAAGCTTTAGCGGCTATGGCTGTGGCTGCTGCAGCTCATGCTGTGGCCACAAGTCATTCTTCAAGTCCGAACACTAGAGGCGATAGAAGCCCTAGTCCAACTATGATGAAATACATGCACCACAGTAACATGTCTCCATCTTCAGCACACGAATCGAATGATGATCCCCATACAAATGGAACTTTTAAAACAGAACACGATGACGATGATAATCAAGTAGAAGACTTATCAATGGGACGCAAACAAGAATCTCGGGTCATCATGCCTCCCATGAATCAAGTCTCGACGATCATAAAAAAAGACGAAATTGTAAAAGATTTGAGAGACGAAAGTAGAAGGGAAGTAGGAATGGACGAGATAAAATAG
- Protein Sequence
- MSATGQQYCLRWNNHRTNLLSVFDELLQNESFTDVTLACDGGNPVKCHKMVLAACSPYFQALFTGLPCKHPIVVLKDVKYSEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSGEPNVFGRDKDEESLSQHSSPSISTTSANIQIAQSTSSSSPPHSTNTIQYSKNYNIYNKSSVERNSRMNLPMWAVPGLPLPHHPTPIPPQSHPHAAATAAAAMLSTCYEAAATDMSPLKRKKLSSLLMNRDTPILRTVLGQGQVESSEPVSLVCHSENHSSPGNGSEQESSDKLMKNEPSEDAQSPYTDFAMMDDEDKSRPAVPSTSPQSYTNELRSSGIATYVPAQKPEWKRYKQYTRNDIMSAIEAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSSGCFPYGISGTSSPYGALSENEDPGASNHPALLEASHFLHALDGRGNEEREALAAMAVAAAAHAVATSHSSSPNTRGDRSPSPTMMKYMHHSNMSPSSAHESNDDPHTNGTFKTEHDDDDNQVEDLSMGRKQESRVIMPPMNQVSTIIKKDEIVKDLRDESRREVGMDEIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00030317;
- 90% Identity
- iTF_00030317; iTF_00030909; iTF_00032142; iTF_00031722;
- 80% Identity
- iTF_00030317;