Basic Information

Insect: Agonum fuliginosum
Gene Symbol: -
Assembly: GCA_947534325.1
Location: OX384046.1:365550-372557[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.033 4.7 9.3 0.1 2 23 218 240 217 240 0.91

2 15 0.035 4.9 9.2 2.1 1 23 336 362 336 362 0.97

3 15 0.00036 0.051 15.5 3.2 1 23 365 388 365 388 0.96

4 15 0.00036 0.05 15.5 1.7 2 23 395 417 394 417 0.96

5 15 0.00058 0.081 14.9 5.8 1 21 582 602 582 603 0.95

6 15 0.0039 0.55 12.3 2.8 2 23 615 637 614 637 0.94

7 15 0.071 10 8.3 1.1 1 23 640 663 640 663 0.96

8 15 0.0012 0.17 13.9 0.7 2 20 669 687 668 689 0.93

9 15 0.028 3.9 9.6 0.4 1 23 694 717 694 717 0.96

10 15 0.69 97 5.2 0.1 2 23 724 746 723 746 0.94

11 15 0.034 4.8 9.3 0.4 2 23 755 777 754 777 0.95

12 15 0.0028 0.4 12.7 0.1 3 23 784 805 783 805 0.96

13 15 3 4.2e+02 3.2 1.7 2 23 949 971 948 971 0.95

14 15 1.7 2.5e+02 3.9 0.2 2 23 978 1000 977 1000 0.93

15 15 0.15 21 7.3 0.9 1 23 1013 1035 1013 1035 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.033	4.7	9.3	0.1	2	23	218	240	217	240	0.91
2	15	0.035	4.9	9.2	2.1	1	23	336	362	336	362	0.97
3	15	0.00036	0.051	15.5	3.2	1	23	365	388	365	388	0.96
4	15	0.00036	0.05	15.5	1.7	2	23	395	417	394	417	0.96
5	15	0.00058	0.081	14.9	5.8	1	21	582	602	582	603	0.95
6	15	0.0039	0.55	12.3	2.8	2	23	615	637	614	637	0.94
7	15	0.071	10	8.3	1.1	1	23	640	663	640	663	0.96
8	15	0.0012	0.17	13.9	0.7	2	20	669	687	668	689	0.93
9	15	0.028	3.9	9.6	0.4	1	23	694	717	694	717	0.96
10	15	0.69	97	5.2	0.1	2	23	724	746	723	746	0.94
11	15	0.034	4.8	9.3	0.4	2	23	755	777	754	777	0.95
12	15	0.0028	0.4	12.7	0.1	3	23	784	805	783	805	0.96
13	15	3	4.2e+02	3.2	1.7	2	23	949	971	948	971	0.95
14	15	1.7	2.5e+02	3.9	0.2	2	23	978	1000	977	1000	0.93
15	15	0.15	21	7.3	0.9	1	23	1013	1035	1013	1035	0.97

Sequence Information

Coding Sequence: ATGGAGGCAACTTTGTGCCTCTTTTGCGGGAGAAATGACCATAACTTTGTGAATATCTTGCAAACGGCCACTTTAAAACACAAAATTGAAACTTGTTTACCTATTATCGTAATACAAGGCAGTTCTCTGCCGCAAAGTCTGTGCACAGCATGTCAGCGAGACATAAACAATTTCTACACTTTCACCAACAAATGTATTGCGCACATTACAAACTTAGAAGCTAAGGCCTCTAAGTTGAGTAATTTCGAGTCTTGTTTAAAAGTAAATCGTAAGAAAGATGTTACAGTTTACGTTGAACCGATAGATCTACCAATTAAACTTTTAAACATACCTACTATCGAAACTTTAGAGCCTGTTGTGGTCAAAACAGAAAAGTTAGTCGATTATGATTCGTATTCGGATACAGAAGATGAACCACTACCGGTAGTTACTAAACCGGCTGCTAGTAGCAGTATAATAGAAGAAATAGCAGAACGCAAAAATTTAAAACGCAAAATTGACACAGTTTCGACTACTAATGACTGCAAATCGGCAAAAATAGCAAAACTAGACACATCTACGGCTTCTAGGCGAAAAAAGAACCCCCCTAAAAAAATCTCCTACCATTTGGAGGACTCTACAGTTGCCAACGATGTCGGTAAAGACCTCCAGAGCTGCTTATTATGTGATAAAGAATTTTCTGGCTTTGCTGGTTTGACAAATCACATATTTGAAGTACACGGTTTAGATTTTACTCAAATATACTCTAATTCGCCGCCAGCGCCACTTCCGGTTAAGGTGGAAGACCCGCCAGAAGTGTTACTTCCGGCTAAGAAGAAAATACCGGAACTGGTTAAGATTTCTGATCTGAATCTAGGGAAAATTGGCTCTAAACTGACTATTGAGTTGGTAGAACCGAATAAGGAACCAACACATGATCTCATTAGACCTGAAGACAGTTTGGAGATAATTCCAACGAACCAAGAAATTTTGAAGCCTACGATGTCGTCTTTGAATGATTCATTATTTATTTGCAATGAATGTCCGAATAGTCGAAAAAGTTTTACAAATTTCACAGATTTTTCAACACATCGTCGATCTCAACATTCAATTTTCCATTGCGATTTGTGTCCTAAGTTCTATGGGCGTAATTCGCACTTATGGAAACATGTGAACCGCGTTCATAAAGGACACTCATCGGTAACATGCTCAGAATGCGGCAAAACAAGCGCCAGCGAATACCATCTCCAACAACACAAAAACAAAATGCATTCTAATTTGAATTCTACGCAAAAACCGGAGAAAAACATCTCAGTAACCGTGGATACGCCTCCCATGGCAACCGTGGTCAAGGAAGAGATCAACAATGCGAAACCAACCACGGTTGCTAAGAAAACGACTGTTGCTAAGAAACCACCTACCAACAATAGCAGAAAGACTACCATGGTTACAGAACCCGATAAAACAGAAAACTCAGAGGTTTTGAGCGATATTGAGCTCTCAGATGATGAAAACGACATTTTAAACCGTAAATTTGAAGGTTTTGACTTTAATTCAGTCAAACAATCGTTTTTGAGGCAAGAATTATTGGATAAACGCGAACGATACGTAAATATATTAAAGAAAAATAATATATTAGGAGAAAATGAAACTATTATCGACACTAAAATAAAAGATACATCACCGCCTAAAGAAATAGATGCTAGTAGCGATCTCTACACTACAATAATCACTAATTACAGTCGACCTACCAACGACGGGCCGTACAAATGCCCGAAATGTCACAAAGGATTCCACAAAAAAAGTCTGTTGAAAAAACACAAAAAGAACTGTAGGCCTAAGCTGCAAAAAGACCTACTCACACGGTGCAAAACATGCAGCCGCATTTTCAAAGACAGACAAAGTCTAAGCAAACATTTGACCAACTACCACAGCAAATATAATTGCGAACTATGCAATATCACAGTCAGCAGCAAATGCGAAATTATTAGCCACATAAGGTTTTCTCACCCGACGTGCGACTTAAAATGCGAGCATTGTGGACAAATATTGCGAAATAAATCAGAATTGAACAACCACAAATCGAATTTGCAGAACAGTTTCATCTGTACGTATTGTGGCGATAGTTTAACAACAAAAATTCGTCTCAAAATGCATATTTTAAGTTTGCATCGCAAAATTTTGTCGCTTAGCTGCGGAATTTGTCTCAAATTGTTCGAATCACAGTACATTTTGAGGAACCACGTCAAGTTGGCCCATTTTCATCAACTTAAAAAGTTCGTCAGCTGTACAATCTGCGGAAAAAATTACGGAACACGTTGGAAAACTTTGGACCACATTAATAAAAGCCACGGCCGCATTTTCAAAGCTTGTAAGGTGTGTCTAGAAGTGTTTGAAACCGAAAAAGAGCTGGAAAAACATCTACAAGTAGAACACGCGACGCATACTGCGTCCCAAATTGGTTTACTCCCGGAAAAACAACCAAAAATGGTCGAAACACCACTCGAAACTCACGATCCGCCTCCAAAAATGCTGGAAATTCAACCAGAGGCAGAAATTCACGACTATATGGACGAATCCCTGGTAATCAAGCGAGAATCCGACGACGACGAGGAATCCGACTCACTCGACAGCAAGCCGCCCAAGTTGTCCAAGTTAACTTTGCTGGAGAAACGGCTTTTGGGGCAGAACACCGCGGACAATTCCCTGCCGGACGAGCCGCCGCCGGAACTCAAGGAGTTTAAGGAGCTGAAGGAGCCCAAGGAACTCAAGGAACCGAAAGACAAGAAGAATCTGCAAACTCAAGACGATATTTTCCAGAATTCGTCCAAACGGACGGTGTACATCAACTCGAACAGTCCAAGTCGATGCGAAATTTGCCTCAAGGTATGGCCAGCGAAGAAGCACTTGTGGCAGCACCTCATTCGCTGCCACAAGGCGACAGCGGCGACTGTGTGCGGCATTTGCCTCAAGAGCAACCCGAGCTACCGCTCCCTGTCTCGCCACCTCCAGCTAGTGCACCCCACGCTGCTGCACGGCCAGGGCTTCGGCTCCAACTTCATCTGCAAGGTCTGCGGCCGGTACCACAACGCTAGCAGCAAGCTCCGCCTGCACATGGCCATACATGTCGGCTTGACTGACACCCAGGGCCCCAAGGAGATGGAAGATGAAGAAACGTCCCAAAATGATCCAACGCTACAAAACCAAACATTACAGGATTCTAATGAAGAAAACGACGATCAAAATGATTCAGAGAACAGTGAAGAAAATTCCGAAGAAGTAGAAGAGCCAGAAGAAGTCGAGGAACCGGAAGAGGCGGAAGAGACATCCGGAAGTGACTTAGAAGACCAAAAATACGAGGAAAAAGAGATAAAGAACGAGTTTGAAGACGACAACTACTTCGAATCGCTAATAGAAGAAGTAGAGGCTTCGTCCGAAGAAGAAATCGAAGAACAAAGCGAAGCAGAGAGCGATGGGAACAACCCAGAAGACATGGAAAAAGAAATGTTAAAAAACATGATAGGCGAATGCCGCTCGCAGCGCCTCACAGTGAAATCCGAACCACCCGACTCGCAATCCGACGCCGAGGAAGCAGAACCATTCTCCCCGTCGTCCGACTACGACCTGGACATAAAGGACGAATTCGTAAAATCCGAACAAAACTCCGCGGACGAAACGTCCCGCGCCAAAGCGGACGAAACCTCCGCGGACGAGCTCTCTTCCTCGTCGGGCGACGAAACGCCGCCGGACGAACTCGACTCGGCCATTCGGTCGATTTCCTTCGGGCAACCTCAACTCGAAACGGAAATCATCGACGAAACAGATGAAGAACTCGAACTGGAGGAAACGGAAGTCGAAGAGGCGGAAGTTGAACTCGAAATCGAACCGGAAGTCGATGATTTCAAGCGGATACAGCGCGTTAACGAAAGCGAATTGGAAACAGCGGTGGGAAGCATACTTTAA
Protein Sequence: MEATLCLFCGRNDHNFVNILQTATLKHKIETCLPIIVIQGSSLPQSLCTACQRDINNFYTFTNKCIAHITNLEAKASKLSNFESCLKVNRKKDVTVYVEPIDLPIKLLNIPTIETLEPVVVKTEKLVDYDSYSDTEDEPLPVVTKPAASSSIIEEIAERKNLKRKIDTVSTTNDCKSAKIAKLDTSTASRRKKNPPKKISYHLEDSTVANDVGKDLQSCLLCDKEFSGFAGLTNHIFEVHGLDFTQIYSNSPPAPLPVKVEDPPEVLLPAKKKIPELVKISDLNLGKIGSKLTIELVEPNKEPTHDLIRPEDSLEIIPTNQEILKPTMSSLNDSLFICNECPNSRKSFTNFTDFSTHRRSQHSIFHCDLCPKFYGRNSHLWKHVNRVHKGHSSVTCSECGKTSASEYHLQQHKNKMHSNLNSTQKPEKNISVTVDTPPMATVVKEEINNAKPTTVAKKTTVAKKPPTNNSRKTTMVTEPDKTENSEVLSDIELSDDENDILNRKFEGFDFNSVKQSFLRQELLDKRERYVNILKKNNILGENETIIDTKIKDTSPPKEIDASSDLYTTIITNYSRPTNDGPYKCPKCHKGFHKKSLLKKHKKNCRPKLQKDLLTRCKTCSRIFKDRQSLSKHLTNYHSKYNCELCNITVSSKCEIISHIRFSHPTCDLKCEHCGQILRNKSELNNHKSNLQNSFICTYCGDSLTTKIRLKMHILSLHRKILSLSCGICLKLFESQYILRNHVKLAHFHQLKKFVSCTICGKNYGTRWKTLDHINKSHGRIFKACKVCLEVFETEKELEKHLQVEHATHTASQIGLLPEKQPKMVETPLETHDPPPKMLEIQPEAEIHDYMDESLVIKRESDDDEESDSLDSKPPKLSKLTLLEKRLLGQNTADNSLPDEPPPELKEFKELKEPKELKEPKDKKNLQTQDDIFQNSSKRTVYINSNSPSRCEICLKVWPAKKHLWQHLIRCHKATAATVCGICLKSNPSYRSLSRHLQLVHPTLLHGQGFGSNFICKVCGRYHNASSKLRLHMAIHVGLTDTQGPKEMEDEETSQNDPTLQNQTLQDSNEENDDQNDSENSEENSEEVEEPEEVEEPEEAEETSGSDLEDQKYEEKEIKNEFEDDNYFESLIEEVEASSEEEIEEQSEAESDGNNPEDMEKEMLKNMIGECRSQRLTVKSEPPDSQSDAEEAEPFSPSSDYDLDIKDEFVKSEQNSADETSRAKADETSADELSSSSGDETPPDELDSAIRSISFGQPQLETEIIDETDEELELEETEVEEAEVELEIEPEVDDFKRIQRVNESELETAVGSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -