Aful001751.1
Basic Information
- Insect
- Agonum fuliginosum
- Gene Symbol
- -
- Assembly
- GCA_947534325.1
- Location
- OX384041.1:22482035-22494191[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00047 0.066 15.1 1.4 1 23 199 221 199 221 0.98 2 11 0.001 0.14 14.1 0.1 1 21 227 247 227 248 0.96 3 11 8.9e-06 0.0013 20.6 2.2 1 23 415 437 415 437 0.95 4 11 0.011 1.5 10.9 5.1 1 23 443 465 443 465 0.97 5 11 7.6e-05 0.011 17.6 3.3 1 23 471 493 471 493 0.97 6 11 0.069 9.8 8.3 0.1 1 12 499 510 499 514 0.84 7 11 0.00052 0.074 15.0 2.3 1 21 676 696 676 697 0.93 8 11 1.1e-05 0.0015 20.3 1.1 1 23 704 726 704 726 0.98 9 11 0.00068 0.096 14.6 1.1 1 23 732 754 732 754 0.97 10 11 2.1e-06 0.0003 22.5 0.5 1 23 760 782 760 782 0.97 11 11 0.29 41 6.3 0.4 1 17 788 804 788 805 0.93
Sequence Information
- Coding Sequence
- ATGTTTGATTTATCTAATTTATGTCGATTGTGCACTTTATCCGAAAACCTTAAGTTTAACTTAAATTCAACTGACATAAATAACATAACTGTTGAAGACAAACTGAGATGGCTCGAACCACACACACTGGAAAATGATAATTTACCTTTCTTAATATGTGAAATCTGTAATGAAAAGTTAAATCAAGCATTTGCATTTAAAGAACAATGTTTATATGCACTTAAAAAGGTACAGAACTATCTGTTACATTCTCTAGAAGTAGAAACAGGCCAACAAGTGGGTGAAATAAAAGAAGAATTATTAGAACTTCCAGAAGATTCTTTCAGTGATGTAAGATCTGAAACTGATTTTGATATAAAAGATGATGAAATAACACAATTTTCTTATTGTGAAACTGAATTAGTGGAAGATGAATATGCATTATCAAATTCTTTACTAACTACGAAAAAAAATAAATCTTTAGATAACAACAATGAGAAACCTGCAAAAATTAACAAACTTGGTGCAATTCGCAGTGCAAATAATCGTTTTGAATATACTATACAAAAAGACGCTGAAAAAATAGTATACATTAGTAATTCCCGTAAAAAAATATTTAGGTGTAACAACTGCCAGAAAAATTATTCTGGCTTTACAGCGTTAAAACGTCATTTATTAATTCATTTGGAACAAAAAGCCTATAAATGTGATATTTGTGGGATAGAAACCTATACGAGTACTGCCTTAAGAAGTCATCAAAATATGCTTGAAGATCCTCGTCTCCCTGTATCATTGTGTTTAAAATGTTGTGAAAGTTTACGAGAAGCTTATTACTTCAAAAAGCAATGTATAAGTTCTATAAACTATTGGAATCGTCAATTAAGTTTAGATGTTATAAAATCTGAATCTATATATTTTAAAGATGAAAGAAAAATTGTTTCAAATTATGAAAATGAAACCAATCATGTTAATAAGTCTTCTACAGATTTTAACAAGAGACTTGAATTGAAATCAACCGACTCAAATATTGCAAAACATGAAACACAACAAGAAATTAATGAAAAACAAAGTAGTCCTGAACAAGAAATAAATGATGAACAATATACGAACTCCGATGCTGAAGATGAACCAAAAACAGAAGAAAATGATAAAAATACGGACAATTCAATACCGTTACCAAAACTGAAAAGAGCACCTAAATCTACATCTTTTCCTGCAATAATTGATCGTTCTACATATATTTTAGATCAAAAGAAAAATTTTTTTCTTTGTAAAACATGCAATAAAAATTTTGCAAATCGAGATTCTTTAAAAAATCATATGCTTCGTCACACAGGTATTAAACCCTTTTCATGTAAACTCTGCGATAAAAAAACTTTTACATACACATGCCTCAAATCTCACATGTTAGTTCATGCAAAGGAATTTCCATTTTCATGTGAAATTTGCAATAAATCATTTAAAAATAAAAATAGACTTAGTCAACACTTGAAATTTCATTCTATAAATCGACCTCATATGTGTGACATATGTGGTAAAAAATTTGTTCAAGAACAATTAAATGATGAAATTAGATTACCAGCATCAGTATGTGCAAAATGTTGCAATCAGTTAAAACAGTCCTACGAATTTAAAAACCAATGTATTCATTCAACAAACTTTTGGTCTCAACAACTGCAAAAACTTAATCATGAAACTTTACTCCGTAAGACAGAGAATATTAATTTAATATCTATAAAACCTACTGAAATTAACTGTGATACTACTGAAAACAATATCATAAATGAAAAATTACAAATAGAGGTAAATAATATGGACGATGTAGTTCATAATAGAGAACAGTATAAAGATATAAATTCAAGTAGTACTGAGAGTGACGTAGACGATTTTCAATCAAATGATGTAGAGCAAGATAAATTAAGATCGAAAAATAAAGTAATAAACGATACTTTAAAGTGTGAGGCGAGTATGGAAGTTGTTAAAGAAAAAAGTCTTTCTTTAGCTATAGATCAGTCAACTTGTATTTTAGATGAAAAGAATAATATATTTTTCTGTAAGAAATGTAACAAGCACTTTGCTAATAAGAATGGACTTAAAGTTCACTTATTAAGAAAAACTGGATACAAACCTTTTTCTTGCAATATATGTGATAAGAAAACTTATTCAGATAGTGATTTAAAGTCACATATGAGAGTGCATGATGATAATTTACCATTTAATTGTAAAATTTGTTTAAAATCTTTCAGAGATGAAACTAGATTGAAAATACACACTCTAATACATGAAGAAATCAGACCTCATATGTGCGAAATATGCGGAAAAAGTTATGCAAGGGATTCAAATCTTCGTGCCCATTTACTGTCACACAGCGATGAAAAAAAATTTCCGTGCAAGCTGTGTCAAAATAAATTTAAAAGTGCTAGTGGATTAAAAATGCTAGAAGAAGACAGTAAAATCTCTTTTAAGATTTGCCAAGTTTGTTGCAAAAAATTGCGACAGTCTTATGATTTTAAAAAGCAATGTGCTACTTCCTATGAATACTGGCAGTTACATTTTCATAAAATAAGCAACATAAAAAAAGAATCATATGATGGTGATTTTAATAAAATAAAACAGGAAGATATACCTATGGATACACCAACTCCTATAAGAAAACGGGGAAGACCTAGAAAAGTGAAATCTGAAAATGAATTAATGGCTCAACCTAAATTAATTGACACTGAAAATAAATTAATGACTTCAAATATGAAAAATAAGTTAGGTTCCGTGTTAAAATCAAATAACACTGAGTCTACGAATAAATTAGGTTCTATATTAAAACCGAATAATGTGGAACCTACAAGCAATCCTAATATTTTTAGTCTTAAGAATAAGTTAAATACTCTTTTAAAATCGGATACAGAAATTAAGAAAGAATTTTCTATTAACACGTTTGAGCCAATTCAATTGAATTTTACTAGTTTAAAAAGTAAATTAGGAGACGCATTAAAGATTGGTATTGAAAATTTTGAAAAGGAAAGAGATACAAATGTAACTAGGCCACCTATAAAACAAAAATATTTGTTTTTGAATAAATCATGTTATATAATTGATATGAAAGAACTGTCCCAACGAGTCATCTGCAGTCGGCGCGTGTCCAAAGTCGGGGAGAGCAGAGAACGCAAGCTGGCCGACGGCGGGCTACTGCTGAAGTACTTAAGCGTTAACGGAGACTGTAGGTGTCTGTGTCTGATAATTTCACGCTCTGTAGGAAGTGGCCACAGTTCCTTCAAAACATAA
- Protein Sequence
- MFDLSNLCRLCTLSENLKFNLNSTDINNITVEDKLRWLEPHTLENDNLPFLICEICNEKLNQAFAFKEQCLYALKKVQNYLLHSLEVETGQQVGEIKEELLELPEDSFSDVRSETDFDIKDDEITQFSYCETELVEDEYALSNSLLTTKKNKSLDNNNEKPAKINKLGAIRSANNRFEYTIQKDAEKIVYISNSRKKIFRCNNCQKNYSGFTALKRHLLIHLEQKAYKCDICGIETYTSTALRSHQNMLEDPRLPVSLCLKCCESLREAYYFKKQCISSINYWNRQLSLDVIKSESIYFKDERKIVSNYENETNHVNKSSTDFNKRLELKSTDSNIAKHETQQEINEKQSSPEQEINDEQYTNSDAEDEPKTEENDKNTDNSIPLPKLKRAPKSTSFPAIIDRSTYILDQKKNFFLCKTCNKNFANRDSLKNHMLRHTGIKPFSCKLCDKKTFTYTCLKSHMLVHAKEFPFSCEICNKSFKNKNRLSQHLKFHSINRPHMCDICGKKFVQEQLNDEIRLPASVCAKCCNQLKQSYEFKNQCIHSTNFWSQQLQKLNHETLLRKTENINLISIKPTEINCDTTENNIINEKLQIEVNNMDDVVHNREQYKDINSSSTESDVDDFQSNDVEQDKLRSKNKVINDTLKCEASMEVVKEKSLSLAIDQSTCILDEKNNIFFCKKCNKHFANKNGLKVHLLRKTGYKPFSCNICDKKTYSDSDLKSHMRVHDDNLPFNCKICLKSFRDETRLKIHTLIHEEIRPHMCEICGKSYARDSNLRAHLLSHSDEKKFPCKLCQNKFKSASGLKMLEEDSKISFKICQVCCKKLRQSYDFKKQCATSYEYWQLHFHKISNIKKESYDGDFNKIKQEDIPMDTPTPIRKRGRPRKVKSENELMAQPKLIDTENKLMTSNMKNKLGSVLKSNNTESTNKLGSILKPNNVEPTSNPNIFSLKNKLNTLLKSDTEIKKEFSINTFEPIQLNFTSLKSKLGDALKIGIENFEKERDTNVTRPPIKQKYLFLNKSCYIIDMKELSQRVICSRRVSKVGESRERKLADGGLLLKYLSVNGDCRCLCLIISRSVGSGHSSFKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -