Aful051352.1
Basic Information
- Insect
- Agonum fuliginosum
- Gene Symbol
- -
- Assembly
- GCA_947534325.1
- Location
- OX384032.1:37072227-37076008[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.46 64 5.7 1.2 1 21 336 356 336 359 0.87 2 17 0.0099 1.4 11.0 0.4 1 23 392 415 392 415 0.96 3 17 1.6 2.2e+02 4.0 2.3 1 19 438 456 438 461 0.81 4 17 0.36 50 6.1 1.1 1 23 538 561 538 561 0.92 5 17 0.0032 0.45 12.5 0.6 1 23 630 653 630 653 0.97 6 17 0.00041 0.059 15.3 0.2 1 23 752 775 752 775 0.97 7 17 0.012 1.7 10.7 1.9 1 23 788 810 788 810 0.94 8 17 0.012 1.7 10.7 4.9 2 23 817 839 816 839 0.92 9 17 0.23 32 6.7 3.9 3 23 844 863 842 863 0.95 10 17 7.9e-05 0.011 17.6 3.0 1 23 869 893 869 893 0.98 11 17 0.0067 0.94 11.5 0.3 3 23 902 921 900 921 0.96 12 17 3.3e-05 0.0047 18.8 3.3 2 23 928 949 928 949 0.97 13 17 2.1 3e+02 3.6 0.4 1 23 961 984 961 984 0.93 14 17 0.027 3.8 9.6 1.0 3 23 1005 1025 1003 1025 0.95 15 17 0.00044 0.062 15.2 1.2 1 23 1031 1053 1031 1053 0.98 16 17 1.7e-06 0.00024 22.8 2.2 1 23 1061 1083 1061 1083 0.98 17 17 1.8e-05 0.0025 19.6 0.1 1 23 1089 1111 1089 1111 0.98
Sequence Information
- Coding Sequence
- ATGGATGCGAAATACATCAAATGTGCGGCTAAATGTTGTGGTAACACACTTCTAGAACGTTCAGATTTAAAATTCTTCACGTTCCCAGAAGATGACAACTTAGCCAAAGTTTGGGCAAAATATGCAAACATAACTTCTTATCAGTACGGATCCACTTTATGTTCTGAACATTTCGAAAACATGTATTTCGATCATACCTATGGCAAGAAATCTGTGTTTAAATCAGATGTTCAACCAATTCCCACTATATTTAATAAGAAGATTATCAAAACAGAAGATAATAGCACTACCAACACATTGGAAAAGAAAACAGAAACACTAACAGAAAAAATTTCAGATGTCCCTCCTCTAGATTTTTACGAATGTTGTCGTCTATGCGCAAGGCAAATGTCATCTCTAAATTTGATATCACTTTTCAACACTTCGAATAACTTCAAAGAACTAATAGACATTTGTCTGCCAGGAAAACTTTCCATATCCGATAATTTGCCCCATGCGATTTGCATGACTTGTTCAGAAAAACTTAAAAGCTGTGCTACAATTCTGCAGCAATTTCAAGATGCAGACAAAAAACTTCGAACTCTTCATCCTACTCCTTCAACATCTAAAGAACGCCCGAAGGTCTCCAAGAAAAGAAAAGAAGCTGTACTAAAGCGAGTAATGAATCCACCATCAGACTCTGAGGAAGGAACTGACACTGAATTAATAGACGCCATCAAAGAATTAGACGATGAAGAAACAGATAACGTTCTAGAATTTCTAGAGAATATGAACAAAATCTTGGAAAAAATCGTTCCAGACGATATAGATGATGTTAACACAACAGATGAAAATGAATTTGATACAACAGATGACAATAATTTTGATGTACCAGATGACAATGACTTTGAAACAGATGCTAAAAGTAAAACAAACAAAGTTGATACAAAAACGGAGATACCAGAAAGTACTCCTGTTACAAAAAATATTGTTGAGAACAAATATATAAAAAAAGATACAATCAAATTCAAATGTATGTCGTGCCCCCAAGTGTTCGACACTAAAGATAAAATAATGCTTCATGCATTCCACGATCACCCAGAGACTAGAGGCAATAAACTAATTTCAACTATTGTTAAAGCATCAGTTTGGGTGAAACCAGATCAAACTCAAATGTTTTCAACTGCTAAAATATATCAATGCGCTGTATGCAACCTAACACTTAAATCACAAGAATCAGTTATCAAGCATACAAAGCTTAATCATAAACATATATCCAGTGATACAATATCAATTAGAGTAACGGACCCACGATTAGGTGATATTATTAAACACATGTGCGTAAATTGTCCTAAAATTTTCGATACCAAAAGTGAGGCTCAGTTTCATGGAAAATTCCACCATCCTGAGAGTAAAATTATATCTAGAAGTATTGTCGTTAAAAAAGGAAAAAACAAAGTTTCCCTCGTTACTCCATTTCTTCAGTATAATTTAAACTCTCAAATAAATCGTAGCTTTAATTCTTTAATGCGGAATGATGCCATTGCTACCACTGGTCATCATAATCATTATTCAAATAACGGCCGACGATATGAATTATTATATGGGCCCTTAAAAACATTTCATATTAAATATAAATGTAAAACTTGTCCGGATATATTCAAAACATATAAAGAAGTAATAGATCATTACACAGAAAAGCATTTAGAATCACTCGAACAGTCTGGCCCCCTCGCATTAGTCGCTAAAATTAAAAATAGCGATAAAACTGATGATAAAACTGATGATAATACTGATGATAAAGATTCTATAGTCATTGTTAAAGACGGCACAATATTAGAAGTTGATCCCAATATATCAGAGAGCCGATCAAATTCCGGTTCAGATAAAGTTAGAACAACTAAAAAATATAAATGTCTAAAATGTCCTAAAATATACCCAACTAAAAAACAAATCATTCAACATAATATGACCGTTCATCCTAGTCCTGACAAAGAAATTAAATGTAAAGTTATTGCCGTAAGCAAAAAAGTCAACTACGTTGGTAAAAAACATGAAAGATATGAATGTTTAATATGTTGCTCACATCACACTACTATATTTTCTTTAATTCACCACACGAGTCTGTTGCATCCAGAGGTCCACAAACATAAATTTTTGTACCGTTTTATTCAGTCTAAATATGTGAGAAGTGAACCTAAACAATGCCTGCGCTGTAACGTTGTACCCACAAACTACACTCGATACAGGCAACATATGCTCAAACATGTCTGCTTCCCGTGCGAAATATGTGGCAATAATTTCACTAAAATCTTTGAATTACGAGAACATATAAGGAACGAACACGATAAAAAACCAGCTGAACTCACCGAACCAGAAATTCATAAATGCATTGTGTGCGAAGAAGAATTTAACTCCAAATCACAGTTACTAAAACATGAAAAACAACATAAAGTACCTAAAGATGTCCAATGCAACAAATGTAATAAACGTTTCCATCACGATTACGAACTCAAAAAACACGAGATAAATTATCACGAAACTTGCCTGTGTCACGAATGTGGTAAAACTTACGAAAAACCTTACATAAGGCAACATTTGCAAACGCATAACAAAGATTTTCCATTTAAATGTAAAATGGTGAACTGTACAAAAGAATTTAAAACACAAAGTTCTATGTTTAGGCACCAAAGAGCCCACGTGCGAAAGAATAACAACACAATCTGTCAAATATGTGGCAAGCTAGTTAGCCGATCGTCACTAACATTGCACATGAAAATACATTCCGTTGTCAGGAATGAAGTTTGCGACATTTGCGGAGCTGCATTCTACCGAAAAGACCACTTAAGACATCATAGAAAACGTCATTCACAATTAGAAAACCCTAGAGATAACACCACATACCTATGCCCTCTATGCAACATAACCTTACTAAACAAAAATTCATACATGAATCACGTGACAACCACGCATGGCATCGAACAGCCTTTAGAGCCTAAGAAAAACAAGTCTCAGCCAGAAAAGAATCTAGCGTGCGTAATTTGCGAAAAGAAATTCGCATTCCGGTGTTACTTAGAGGAACATTACCTGCAGCATAGAGGTGAGAGGGTTTTCAAATGTGACGTGTGTAATAAAGGCTTTACCACGAGAATAGTGTTGTATCAACACAAACTCACTCATTTGTCATACGAGCAGCTGCGTCATCAGTGTGATATTTGTGATAAAAAGTTCCGAAGACGCGGACAATTAGTCGATCACCGGAGAGTACACACCGGGGAAAAACCATTCCCGTGCCCTGTTTGCAAAAGACCGTTCAGAGTTCGCGGAGAAATGGTTAAACATATGAGGATTCATAATAAGAATAGGGAGGTTAGAAGTTCGAGACATAAACGTCCCTATCCACAACTTCCACCATCTCCTACTGTTGATGTTGATGAGAGTTCAGAAAATCAAAGTCTATGTTCAGATCTAGAAGATGAAAGTAAAGAGAATACTTCATCTGCGCAAGAAGTTATCCCACAGAAAAGAACCCGAGTTGTCAATAAGATCATTCGAAAGAATAATACTATTTTTCTTATTGAAGAAGACAGTAATTCGTTAGAGAACTTCGGAGATGATATGCCATCTTTAGAATAA
- Protein Sequence
- MDAKYIKCAAKCCGNTLLERSDLKFFTFPEDDNLAKVWAKYANITSYQYGSTLCSEHFENMYFDHTYGKKSVFKSDVQPIPTIFNKKIIKTEDNSTTNTLEKKTETLTEKISDVPPLDFYECCRLCARQMSSLNLISLFNTSNNFKELIDICLPGKLSISDNLPHAICMTCSEKLKSCATILQQFQDADKKLRTLHPTPSTSKERPKVSKKRKEAVLKRVMNPPSDSEEGTDTELIDAIKELDDEETDNVLEFLENMNKILEKIVPDDIDDVNTTDENEFDTTDDNNFDVPDDNDFETDAKSKTNKVDTKTEIPESTPVTKNIVENKYIKKDTIKFKCMSCPQVFDTKDKIMLHAFHDHPETRGNKLISTIVKASVWVKPDQTQMFSTAKIYQCAVCNLTLKSQESVIKHTKLNHKHISSDTISIRVTDPRLGDIIKHMCVNCPKIFDTKSEAQFHGKFHHPESKIISRSIVVKKGKNKVSLVTPFLQYNLNSQINRSFNSLMRNDAIATTGHHNHYSNNGRRYELLYGPLKTFHIKYKCKTCPDIFKTYKEVIDHYTEKHLESLEQSGPLALVAKIKNSDKTDDKTDDNTDDKDSIVIVKDGTILEVDPNISESRSNSGSDKVRTTKKYKCLKCPKIYPTKKQIIQHNMTVHPSPDKEIKCKVIAVSKKVNYVGKKHERYECLICCSHHTTIFSLIHHTSLLHPEVHKHKFLYRFIQSKYVRSEPKQCLRCNVVPTNYTRYRQHMLKHVCFPCEICGNNFTKIFELREHIRNEHDKKPAELTEPEIHKCIVCEEEFNSKSQLLKHEKQHKVPKDVQCNKCNKRFHHDYELKKHEINYHETCLCHECGKTYEKPYIRQHLQTHNKDFPFKCKMVNCTKEFKTQSSMFRHQRAHVRKNNNTICQICGKLVSRSSLTLHMKIHSVVRNEVCDICGAAFYRKDHLRHHRKRHSQLENPRDNTTYLCPLCNITLLNKNSYMNHVTTTHGIEQPLEPKKNKSQPEKNLACVICEKKFAFRCYLEEHYLQHRGERVFKCDVCNKGFTTRIVLYQHKLTHLSYEQLRHQCDICDKKFRRRGQLVDHRRVHTGEKPFPCPVCKRPFRVRGEMVKHMRIHNKNREVRSSRHKRPYPQLPPSPTVDVDESSENQSLCSDLEDESKENTSSAQEVIPQKRTRVVNKIIRKNNTIFLIEEDSNSLENFGDDMPSLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -