Basic Information

Insect: Agonum fuliginosum
Gene Symbol: -
Assembly: GCA_947534325.1
Location: OX384039.1:4718619-4723842[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.12 17 7.5 0.2 3 23 389 410 388 410 0.94

2 16 0.0034 0.48 12.4 2.0 1 21 418 438 418 439 0.95

3 16 5.7 8.1e+02 2.3 1.6 2 23 448 469 447 469 0.88

4 16 0.013 1.8 10.6 0.4 3 23 478 499 476 499 0.92

5 16 4e-05 0.0057 18.5 0.2 1 23 505 527 505 527 0.97

6 16 0.002 0.28 13.2 1.3 1 23 533 555 533 555 0.94

7 16 1.7e-05 0.0024 19.7 2.8 1 23 561 583 561 583 0.99

8 16 0.69 97 5.2 0.2 1 17 593 609 593 616 0.81

9 16 0.00033 0.047 15.6 3.8 1 23 631 653 631 653 0.98

10 16 1.1 1.6e+02 4.5 4.2 1 23 659 681 659 681 0.95

11 16 0.082 12 8.1 3.5 1 23 699 722 699 722 0.93

12 16 0.0023 0.33 13.0 2.2 1 23 729 752 729 752 0.98

13 16 0.0029 0.41 12.7 3.5 1 23 757 780 757 780 0.96

14 16 1.1e-05 0.0016 20.2 0.1 2 23 788 809 787 809 0.97

15 16 0.27 38 6.5 0.1 1 23 815 837 815 837 0.93

16 16 1.3e-05 0.0019 20.0 2.4 1 23 858 880 858 880 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.12	17	7.5	0.2	3	23	389	410	388	410	0.94
2	16	0.0034	0.48	12.4	2.0	1	21	418	438	418	439	0.95
3	16	5.7	8.1e+02	2.3	1.6	2	23	448	469	447	469	0.88
4	16	0.013	1.8	10.6	0.4	3	23	478	499	476	499	0.92
5	16	4e-05	0.0057	18.5	0.2	1	23	505	527	505	527	0.97
6	16	0.002	0.28	13.2	1.3	1	23	533	555	533	555	0.94
7	16	1.7e-05	0.0024	19.7	2.8	1	23	561	583	561	583	0.99
8	16	0.69	97	5.2	0.2	1	17	593	609	593	616	0.81
9	16	0.00033	0.047	15.6	3.8	1	23	631	653	631	653	0.98
10	16	1.1	1.6e+02	4.5	4.2	1	23	659	681	659	681	0.95
11	16	0.082	12	8.1	3.5	1	23	699	722	699	722	0.93
12	16	0.0023	0.33	13.0	2.2	1	23	729	752	729	752	0.98
13	16	0.0029	0.41	12.7	3.5	1	23	757	780	757	780	0.96
14	16	1.1e-05	0.0016	20.2	0.1	2	23	788	809	787	809	0.97
15	16	0.27	38	6.5	0.1	1	23	815	837	815	837	0.93
16	16	1.3e-05	0.0019	20.0	2.4	1	23	858	880	858	880	0.98

Sequence Information

Coding Sequence: ATGGCACAAAATATGAAATTGTCCATCGTAGGTGAAGGAATAGAAAATGTGATCGTAGAAGTGACTCCTCATGAAACATTTGAAGATTTTCAGCAAAAAGTTTTCAAAGAAAGCAATCTATGCATTACAGTCGAAGATTTTCAATTGTTTTTTGAAAATCTGCAACCTGAGGACAATTTATTCGATTGTTTACGAGAAAACTTAAACATTGGGGATGATATGCTCAATCTAGAAAACGCACCAATTTACGAAATCAACATACTGAGAGAAGGCAACATTAAAGATGAACACAACAGCTCATTTATTATTAATGATGTTATTGAATCTGCTACAGCAGAACATTTTGATTCATATAAAGAAGTTGAAATTTTAAATTCATCTCTCATGGTTCTAAACGAGGGTCAAGCCTCGGAATATACAATTCTTAATGAACATTTATTTGAACCTGATTTTGAGCAAAATAAAAAACCAGAAGATTCAGACGTGTATAGCGAAAATAACGATTTGGCTGCAACTAATTTCAGTGGACTTATTTCAAATAAAGAAAGCAACCAAGAAAAACCAAAAGATAATGAGGAACCTTCTCAAAATTACAACTACATGGATATAGAATCACAAATGGCAGAAATGCACGACTGTAACGAAGAAATTATTACCGATATTTGCAGATTATGCGCAAGAAACATTACAGAAGGTCACAAAATTGAAATATATGACGAGGATGAAAAGTTAGGCGAAAAAATTAACACTGTATTGCCGATTATTATTAAGAAAGAAGATGGGCTTCCTCAACAAATTTGTATATTATGCACTGAAAAAATTACTAATTATTACGAATTTGTTCAGACTGTTTTAGAAGGAGATAAGCAACTGAGGATAAAGTTTCCAACAAATTATACGAATAATATTTCATCAGCCTCTAATTTGGTGACCGAAGTATTCAGTCCAGCCGCAATAGAAGCACAAGCCAGGAACATTAAATTCGAATTATTAGAGCCAAATGAAAGTGAAAACGAATTTGAAACTGAGTATCTATTACAAGAACCCGAAAGTAAATTTAACAGCGACAAACTCAACTGTAGATTATGTGACTTAATAATAGATAACGTAAAAGAGGCAGTGAATCACAGTATAAATGAACACCCAATAAATAATCTAGTTGCCTGCGTATTTTGCGTGCTAGGTTTCCAAACATCAACCTCATTACAACAACACATTAAATTAGAACATCGTATGTTATTTGAGCAAAAATATCAATGTACAGTGTGTTCAAAGAAGTATAGTTCACAGTTATTATTGCTGAAACACACATGCGTGAAGGGAAATGCAAATAAAAATTTGCATTGTGAAGTTTGCAACAACGCGTTTCCATCAAAAGTTAGATTAAATTTTCATAGACAATTCCATTTAAAAGACGCGCGACCGCTCTTTTGCGCCGAATGCGACATGTCATTCAAAACCGAGAACGAATTTTTTGATCATGTTAATTTTATCCACGATTCCAAGCAAAGTTTCCCTTGTGATATTTGCGACAAAACTTTCAGCATTCGCGCTGCGTTGAATAATCACAAAAAAGCACATTCCAATACTCGAAATCACAAATGCGACATTTGTGATAAAACTTTTTTGGATAAACAGACTTTAAAAGATCATGAAGTGGTTCACTTGGACTCTAAACCGTTTCAGTGCCACATTTGCGGGAAGAATCTTAATAGATTAAGCAGACTTCGTCGCCATCTTTTAACTCACGAGTCCAATCCTGTCATCAATGATGTTTTTGTTTGTGAAACTTGTAAAGAAGCATTTGCCGATGAAGGTAATGCTCAATTTCACAGAACTCTCCTGCATGGCAAGAAGGACTGCATTAAAATGATTTGTACCGATAGAGTATTTCGATGCGAATTTTGCGAGAAATGTTATTATACTCCTACGGCGCTTAATAATCATAGGAGTACACATTCAGGGCCCACTCCTTATAGTTGTCACATTTGTAAAGCCCAATTTAGTTCGTACCCAAGACGTACCACACATAAAACTACCCATGGTTTATACAAAGACGGTGCGGAAAAAGACCAATTTCCAGTGGTAAAACATTTTCTTTGCGAGCACTGCGGCAAATCGTATCTTCATTGGACTTATTTAGGTCTTCATCGACGGTTAAAACACTCCGAAACAGTCCAAATCCACAAATGTACCGACTGCAAATTGCAATTTCCAAATAGTTGGGGATTGGCCTATCACAGAAAAACCAAACACAGTATTGATAATTTTAAATGTAACGAGTGCGGAAAAGTCCTAGCAAATGAGCATTGCTTGAAGCTGCATAATTTGACAAAACATGTTCCTCAGAAAAAAGATAACCAGTGTGTGATTTGCGGCAAAATATTCCAGTACCCATCATCGTTAGAAGCGCACATGAAGGCTCATAAAGGGTTGAAGGAGTTTAAATGTGCTTTATGTCCTAAAATTTATCTTAATCTTGGAACACTAACAGCTCATTTTGCGGAACATAAAGCTAGAAAGTTTGTATTTCCCGAATCAGAATCGTTATTGAATAATGTTGATCGTCCATTTACTTGTGATGTTTGTGGATTATCATTCAGAAGACAATTTACTTTAAAAAATCATAAATTGAAACATACACAACCTACCGCCGAAGGAAGTTTTGTCTTAATGGTTGACATGAAAGAAGATGAAGATAAAGAACAAGATAAAACGCCAACTGAGGAACAAATTGCACAAGTTTTGGAAAACGAAACTCCGGAAATGACATACATGCAAAATGAGCAAGATTTGACTTCAAATTATATTGACATGGGCAATGGAAACATTTTACAAATTCAGGGTAATACTTTTAATATAGAAGGCAAACAATATATCCTAGTTGGCGAAGATGGAAAGGCAATAGGAAGAAATCCAGAATTCGAAATGATTGTCGACGAAACTTTGAGGGGCGAAGAACAGAATCAGTCTAATTTGGTTCCTGAGCAGCAGCAAATTGAAAATAATGTAATGTACGTTGAACCGGATAACAATTACATAATATCTCAGAATGAAATGCAACCTGAGTATATCTATACAACAACGGATAAAACGGCAAAAACGGTAACAACTTCTGCATCCACATACGTCATCGACGGGAACGAATTTTTGCTTCAGCCTGACGAGCAAACTTTCTAA
Protein Sequence: MAQNMKLSIVGEGIENVIVEVTPHETFEDFQQKVFKESNLCITVEDFQLFFENLQPEDNLFDCLRENLNIGDDMLNLENAPIYEINILREGNIKDEHNSSFIINDVIESATAEHFDSYKEVEILNSSLMVLNEGQASEYTILNEHLFEPDFEQNKKPEDSDVYSENNDLAATNFSGLISNKESNQEKPKDNEEPSQNYNYMDIESQMAEMHDCNEEIITDICRLCARNITEGHKIEIYDEDEKLGEKINTVLPIIIKKEDGLPQQICILCTEKITNYYEFVQTVLEGDKQLRIKFPTNYTNNISSASNLVTEVFSPAAIEAQARNIKFELLEPNESENEFETEYLLQEPESKFNSDKLNCRLCDLIIDNVKEAVNHSINEHPINNLVACVFCVLGFQTSTSLQQHIKLEHRMLFEQKYQCTVCSKKYSSQLLLLKHTCVKGNANKNLHCEVCNNAFPSKVRLNFHRQFHLKDARPLFCAECDMSFKTENEFFDHVNFIHDSKQSFPCDICDKTFSIRAALNNHKKAHSNTRNHKCDICDKTFLDKQTLKDHEVVHLDSKPFQCHICGKNLNRLSRLRRHLLTHESNPVINDVFVCETCKEAFADEGNAQFHRTLLHGKKDCIKMICTDRVFRCEFCEKCYYTPTALNNHRSTHSGPTPYSCHICKAQFSSYPRRTTHKTTHGLYKDGAEKDQFPVVKHFLCEHCGKSYLHWTYLGLHRRLKHSETVQIHKCTDCKLQFPNSWGLAYHRKTKHSIDNFKCNECGKVLANEHCLKLHNLTKHVPQKKDNQCVICGKIFQYPSSLEAHMKAHKGLKEFKCALCPKIYLNLGTLTAHFAEHKARKFVFPESESLLNNVDRPFTCDVCGLSFRRQFTLKNHKLKHTQPTAEGSFVLMVDMKEDEDKEQDKTPTEEQIAQVLENETPEMTYMQNEQDLTSNYIDMGNGNILQIQGNTFNIEGKQYILVGEDGKAIGRNPEFEMIVDETLRGEEQNQSNLVPEQQQIENNVMYVEPDNNYIISQNEMQPEYIYTTTDKTAKTVTTSASTYVIDGNEFLLQPDEQTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -