Basic Information

Insect: Agonum fuliginosum
Gene Symbol: ham
Assembly: GCA_947534325.1
Location: OX384036.1:23078706-23091747[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0036 0.51 12.3 0.1 2 23 73 95 72 95 0.95

2 9 0.0012 0.17 13.9 1.6 1 23 102 125 102 125 0.95

3 9 1.3e-08 1.9e-06 29.4 1.4 1 23 131 153 131 154 0.96

4 9 4.9e-06 0.00069 21.4 1.7 1 23 160 182 160 182 0.95

5 9 3.7e-05 0.0052 18.6 5.0 1 23 188 210 188 210 0.99

6 9 0.0027 0.39 12.7 1.1 2 21 218 237 217 238 0.95

7 9 1.3e-08 1.8e-06 29.5 0.7 1 23 593 615 593 615 0.98

8 9 4.5e-07 6.4e-05 24.6 1.7 1 23 621 644 621 644 0.97

9 9 1.3e-05 0.0018 20.1 3.4 1 23 650 672 650 672 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0036	0.51	12.3	0.1	2	23	73	95	72	95	0.95
2	9	0.0012	0.17	13.9	1.6	1	23	102	125	102	125	0.95
3	9	1.3e-08	1.9e-06	29.4	1.4	1	23	131	153	131	154	0.96
4	9	4.9e-06	0.00069	21.4	1.7	1	23	160	182	160	182	0.95
5	9	3.7e-05	0.0052	18.6	5.0	1	23	188	210	188	210	0.99
6	9	0.0027	0.39	12.7	1.1	2	21	218	237	217	238	0.95
7	9	1.3e-08	1.8e-06	29.5	0.7	1	23	593	615	593	615	0.98
8	9	4.5e-07	6.4e-05	24.6	1.7	1	23	621	644	621	644	0.97
9	9	1.3e-05	0.0018	20.1	3.4	1	23	650	672	650	672	0.99

Sequence Information

Coding Sequence: ATGCAAACAAAGAAAGATGAAAACACAGATGGTTGTAAATCTTTAAAACTAGTTGTCTCATTAACACAATCAGTTGGCGTAGCCGATTGTTACAAGTGGCTTGTGACGGTGAAGAAATTAAAGATTGCGTTATTTGTTACAGCTTCACAGCACAGTGGTACAGTTGACGAAGAACGGGAAGAAAGAGAAGAAGCTGAGGACGAAGACAACGAGAGCCGGTGCTTCGTTTGCGAAAAGCCTTTCACCGATGTAGACCAACTCGACGACCACCTGATCTCTGCGCACCGCTACTCCCCGGACCAGTTCCGGTGCGAGTTGTGCCCGCGGGCCTACTCTCACCGTCCTTGTCTGCTGCGCCACCGGGCCATCGCGCACGGGGATCTGCGCAAGTACCCGTGCGAGAACTGCAGCAAGGAGTTCACGGACCCCAGCAACCTCCAGCGACACATCCGCACGCACCACGTGGGCGCCCGGAGTCACGCCtgcccggagtgcggcaagaccttcggcacttcctccggactcaagcagcacacgcatatacactccagtgttaagcccttccagtgcgaggtgtgcTTTAAGGCGTATACCCAGTTCTCCAACCTGTGCCGGCACAAGCGCATGCACGCCGACTGTCGAATGCAGATCAAGTGCGTGAAGTGCAACCAGAGCTTCAGCACCGTGACGAGCCTGTCCAAGCACAAGCGCTTCTGCGACAGCACCTCCAGCACCGCGAGCCTAGCTGTGCCGCCACAGCACCCCATGACCTCGCTGCCCATGCCCAACAACCAGCAGAACCCGTTCATCATGTACCGACCACCTGCCGGACTACCGTTCTTCCCCACCGCCTTCAACCCCTACAACCCCATCTTGCATCCTTCCCTACATCCCAACGAATCTCCACCAGGTATCTTCAACAATTCCTTCTTGTTTAACCAGTTCCCTAAGCTACCTGAAACCAACCAGAAGGTGCTCATGTCTCTCAGACACCTGAGTTCGCTGAACCAAGAGAGAAGATCGCCTCCGAAGGAACGGTTCACTCCCCCACCTGTTAACAACCCTGTCGCGGCGAAGGTTTCTCCTCCAACTGCTGAAGAAGCTTCTACACATTTGACTCCTTCACCTGCACGGCCTCCTCTGAGCGCCAACTCGAATATCTTCAACAATCCCAGAGAACAGTTGAGCAAACGCGAAGAGGAGGATGATACTCCTAGAGATCTTTCTCGAAGAGCTAGTCCGGTTAAACTTGAAGATGTCAAATCTGACAACACTGATACTGAATCGAATGAGCAACCTTTGGACTTGACTATGAACAGAAACAAGCAAGACGATGATGTTGTTAGTGTCAAAGAAGAAGAAATGAGGGTTGAGACGACACAAATTGTTACTGCTAGTAATAAGGTTGAAGAGAAACAAGAACAAATGGAAGTTGATGAGATTAAAAGACAAGAAACTCCGCCTCAGTCTGTTTATGATAAACTAAGCGTGACTCCTCCGATGGCATATCCTCGTCCGATTCATCCCCAAATGTTATTTGAAGCAATGTGCCGCCCACCAGGTACTTTCCATGGTTTCCCCCCAACCGGAAGCGATCGTCTACTTCCTCCCCCTTCGCCTTTCGGCCACCCAAGGGGGTTTCCTTTTTTGGGTCCTTTCGGTCAACAGCGCCAACCGTTAGAAATGCTTCGCCCAGGTTTACCAGGATTTGGCAACGTCAAACCTTTCCAAGACGTTATGGGGGCCCACCAAACAAACAACAAAATGAAAGATAGATACGCGTGCAAGTTCTGCGGAAAGGTCTTCCCAAGGTCAGCGAATTTGACCCGGCACTTAAGGACCCACACGGGAGAGCAGCCTTACAAATGCAAATACTGCGAAAGGTCGTTCAGTATCTCATCAAACTTGCAAAGACATGTTAGGAATATCCACAATAAAGAAAAACCCTTTAAATGTCCGCTTTGTGAACGATGTTTCGGGCAACAAACTAACCTTGACCGCCATCTTAAAAAGCATGAGGCCGATGACGGAAGTGGGGTCGTTGCTGTGGCTGATTCCCCCGGAAGTAGTAATGAAAACGAGCGGGAAGATGCATATTTCGACGAAATACGTTCTTTCATGGGAAAAGTTACCTATTCTGGTACTGATCCATACAACCCGACACATTTATATACTCCTCCACATCTGAATAATGTTATAGATGTGGTTGGAAAAGACGATGAAGATTCTGAATCTTATTCGGAAGATCCGTCGCCAACAGAAGATCTCTCGAGATCGAGAACTCTTTCGATTGACAACTCGTTTGAGAGCAATATTAAAAAGGAAAAGGACGAAATGTTTAATAATAATGTAACGAATGATCAGAGCATACAGATATCAACTTAG
Protein Sequence: MQTKKDENTDGCKSLKLVVSLTQSVGVADCYKWLVTVKKLKIALFVTASQHSGTVDEEREEREEAEDEDNESRCFVCEKPFTDVDQLDDHLISAHRYSPDQFRCELCPRAYSHRPCLLRHRAIAHGDLRKYPCENCSKEFTDPSNLQRHIRTHHVGARSHACPECGKTFGTSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCVKCNQSFSTVTSLSKHKRFCDSTSSTASLAVPPQHPMTSLPMPNNQQNPFIMYRPPAGLPFFPTAFNPYNPILHPSLHPNESPPGIFNNSFLFNQFPKLPETNQKVLMSLRHLSSLNQERRSPPKERFTPPPVNNPVAAKVSPPTAEEASTHLTPSPARPPLSANSNIFNNPREQLSKREEEDDTPRDLSRRASPVKLEDVKSDNTDTESNEQPLDLTMNRNKQDDDVVSVKEEEMRVETTQIVTASNKVEEKQEQMEVDEIKRQETPPQSVYDKLSVTPPMAYPRPIHPQMLFEAMCRPPGTFHGFPPTGSDRLLPPPSPFGHPRGFPFLGPFGQQRQPLEMLRPGLPGFGNVKPFQDVMGAHQTNNKMKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHEADDGSGVVAVADSPGSSNENEREDAYFDEIRSFMGKVTYSGTDPYNPTHLYTPPHLNNVIDVVGKDDEDSESYSEDPSPTEDLSRSRTLSIDNSFESNIKKEKDEMFNNNVTNDQSIQIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00769038;
90% Identity: -
80% Identity: -