Basic Information

Insect: Agonum fuliginosum
Gene Symbol: -
Assembly: GCA_947534325.1
Location: OX384031.1:2412302-2416869[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.8e-05 0.0053 18.6 0.7 1 23 150 172 150 172 0.95

2 15 0.0018 0.25 13.3 1.1 3 23 180 200 179 200 0.99

3 15 7.5e-05 0.011 17.6 0.1 1 23 311 333 311 333 0.98

4 15 0.1 15 7.8 0.2 1 23 339 362 339 362 0.97

5 15 2e-05 0.0028 19.5 4.1 1 23 388 410 388 410 0.98

6 15 0.0035 0.5 12.4 0.1 1 23 425 447 425 447 0.95

7 15 0.0017 0.23 13.4 1.5 1 23 453 476 453 476 0.95

8 15 0.04 5.6 9.1 2.2 2 19 484 501 484 502 0.96

9 15 1.7e-05 0.0025 19.6 4.0 1 23 511 533 511 533 0.97

10 15 0.15 21 7.3 0.3 2 23 539 560 538 560 0.97

11 15 1.2e-05 0.0017 20.1 0.4 1 23 568 590 568 590 0.98

12 15 0.0053 0.75 11.8 0.2 3 23 598 618 596 618 0.97

13 15 0.00017 0.024 16.5 0.3 1 23 624 646 624 647 0.95

14 15 0.013 1.8 10.6 2.3 1 23 661 683 661 683 0.96

15 15 0.0019 0.27 13.2 0.2 1 20 1031 1050 1031 1053 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.8e-05	0.0053	18.6	0.7	1	23	150	172	150	172	0.95
2	15	0.0018	0.25	13.3	1.1	3	23	180	200	179	200	0.99
3	15	7.5e-05	0.011	17.6	0.1	1	23	311	333	311	333	0.98
4	15	0.1	15	7.8	0.2	1	23	339	362	339	362	0.97
5	15	2e-05	0.0028	19.5	4.1	1	23	388	410	388	410	0.98
6	15	0.0035	0.5	12.4	0.1	1	23	425	447	425	447	0.95
7	15	0.0017	0.23	13.4	1.5	1	23	453	476	453	476	0.95
8	15	0.04	5.6	9.1	2.2	2	19	484	501	484	502	0.96
9	15	1.7e-05	0.0025	19.6	4.0	1	23	511	533	511	533	0.97
10	15	0.15	21	7.3	0.3	2	23	539	560	538	560	0.97
11	15	1.2e-05	0.0017	20.1	0.4	1	23	568	590	568	590	0.98
12	15	0.0053	0.75	11.8	0.2	3	23	598	618	596	618	0.97
13	15	0.00017	0.024	16.5	0.3	1	23	624	646	624	647	0.95
14	15	0.013	1.8	10.6	2.3	1	23	661	683	661	683	0.96
15	15	0.0019	0.27	13.2	0.2	1	20	1031	1050	1031	1053	0.93

Sequence Information

Coding Sequence: ATGGAGGAAGCAGGCTTCGTGCTATGGCCGGACGGCAGCAACACAGTGCGCGAGGAGGTGATCTGCGGCATCGACAATGGCTGCGCCATCATGCAGACCGACGGGCCGGAGCCCCAGGGCTACGAGGACGTCTGCGAGGAGGTCGTGGTGCAGCAGGACGTGGTGGCCGAGACCATCGTGCCCGAGCAGGACGCCGGGGAGGGCGTCGTGTATCTCACGCCCGGGAACATGATTGTCATGAACCAGGGCGCCAGCAACTTCCAAGATAACTTCATGGAGTGCCAGGTAACCGAAGAAGTGATAACCGCGGATGACTGGGTCCAATCCGCCGGAGAAGAGCGCGTGGAGATTCCAGTGGGCGAAGTGGGCGCCGAGCAGCAGATCGAGTACGACGACACGGAGGTGCCGCTGCCCACCGACCAAGACGAGTACACGGCCAGTCGGCCCTACCCCTGCGACTTCTGCAGCCGCCGCTTCCGCAAGAAAGCGAACCTGATGAACCACATGGTGGCCCACCAGACCGACCGGCCCCACGGCTGTAACCTCTGCGGGGCGCGCTACATCCGCAAGTGCGACCTCATGAACCATCTCAAAATACACGCCTACGTACCAGACCCTGATGTCCTGGACGAAGAAGAGTTACCACCTTTACAGCTAGAATCTGAAGAGAAAACTAAAAAGAAAAAAACTACCAAAAAACGGAAAATTTCACCCGCAAAACTACCAAAAATCAAACAAGAACTCATAGATTCTGATGAGAGATATGAAGTACCTTCTAGATCGTACAATTACGTTGATGAAGATGTTCGATTATTAACAGAAATGGAAAACCATGTTAATTCTAACCGTAACGACTCATTCAGCTCGTATAATGATGTCGATGCTTCGATGGTAGAAGCTCGCTACCCGATTCTCGACCCGAGAAAACCTTTTGTTTGCCAGCACTGCGGCGTGGCATTCGCCCGAGAAAAGGCTCTAGCCAGCCACGCAAGAATCCACGCCGGGGATTCCCCCTTCGAGTGCGAAACCTGCAACGAAATGTTCTGGGATGTGACGGTTTTGCGAGAACACGTCCGCACCAAACACGGCGGCATGGCCAACGACTCCGACTACGAAGACATCGATGATGATGATTATGTTGATGAATCCAAATACGGAGAGTTTTATTGTAAAGTCTGCGGGATGAGGTTCCACCGGACAGACCTTCTCCGGAGACACATGAGGAACCATGATGATGTCAAAGAAGAGTTCAACACTGATACCGAGTACGCGCATGTTTGTAATGTCTGCGGGCAGAGCTTCAACGAAGCGCTCGATCTTCTGGCCCACTCGGAGAGCCACGCCCGGCAAATGGGGCACCGGTGTATGCTCTGCGGCGAATGCTTCAGTGATGAGTCCGCTATGGCTAACCACGTCATGCAACGTCACGGAAAAAACATGCCGCCGAATACTTGCATGCTGTGCGGCAAAACATGCAAAGATCGACGCACTCTCCTCAAACACTCCTGGGACCACTCCCGAGAAAAGCTCTTCTCGTGTTCAAAGTGCGGCAAAAGCTTCCACAACAAAGCTCGGCTCAAGCGGCACATGGTCTCGCACAGAAACAAAGCCGTGCAGTGCGACGTCTGCGGAGATGATTTCCCGGACGGCCGCTCGCTGATGAACCATCGCCACAGTCATTCTAACATCTCCGGCAGACAGTTTCcttgtcgagaatgcggtaaaacgtttggtagccgaagttcacagcagatacacattcgtattcataccggagaacgcccgtatggatgtcggttttgctggaaagcctttgcagatggcggcacgttacgaaaacatgaaaggattcatactggggagaagccgtacgcgtgtgcggtttgcccgcgcgctttcaaccaaagAGTTGTGCTGCGTGAACACATCCGAAGCCACCACTCCGGACCAGACCCGCAGTACAGCCACACGATGACGCCCTACTGTTGCTCGGTCTGTAACGACATGTTCTCCACGTCACAAGACCTGATTATTCACCTCATTCATCACTGTGATCTCAACACTGCGATGAAACGACAACCTCAAGTCGGGCCCAGGAAATACAAACGCCGGAGAAAACTCAAACCACACGAACTTGAACTCATCTCAAACCGAGTCGATAACGACAATGATATTTATTCCGATTCCGACGAAAAGAGCAAAAGAAAAAGCCCGAAAAAAGTCAAACCACAACCAACAAGTAGCAACAATAAAACTAACCTAGAAAAAAATTACGAAGACGTGTTCCAAAGTTTTGAATCTGCGATACAAAATATTAATTCGTTGGTGAACTCTAAACCTGCACCAGCAAGAGGAAGGAAAAAAATCAAACCTGCAGAGACTCAAATGTCGTCAATGCCTTCAAGACCAAAAATGATCCATACCCAAAAGACTCGAGTACCAATCGACGCTCAGGACGGCCGAGGAAAACACAAAACCAAGACGTTGATAACGCGAACGACGCCCGCTGAGCACATCGTCAAAGAGAAAATCACATCAGTGGGTGAGAGAAACCGCCCGAGGACTAAAAACGTCAGCTACCATGTCCTCCAGGCCGACAAATTACCTTTAGCCACTTTTGCAGATGAGGACGACTTGGACCAAGAAAACACAAACCCTGATAACGAATACAATAATGGAATCATAATAAAACCAGATCCTGACGCATCTAGACACAACGATATAGAAATGGAGTATCAAACAGTAGAAACAGAAATACCTGACGTTGCAAATGAAGAGACAGTTCTCGCACAAGTCGAGGAGCCTTCTCCCGAGCAATTGATGCCGGTGTCGATGATAAAAGTTACCAAAAACGTAGGCAAACGCAACAATAGTCTCACTCCGGGTCGGCATATAATCGGCCCGGGCAACAAAGTGATCCGAATAGTCAAAGGCGGTATGTTGATCAGTAATAAAATTAAAAAAGAACCCGAATTGCTTGTTCCAGATCTGGAAAACCAGCAATTGTTAAAACACGTGAAACAGGAAGTTGTAGAACCGAGTCCGTTGCATGAGCTGGCAGAGTTGTCCATGCAACACGCGCAGAACCAATTCCGGTGCGAAATGTGCTCCGCGACATTCAACGATCGCTCGCAACTGTTGATGCACGTGCCCGTTCATATCTGA
Protein Sequence: MEEAGFVLWPDGSNTVREEVICGIDNGCAIMQTDGPEPQGYEDVCEEVVVQQDVVAETIVPEQDAGEGVVYLTPGNMIVMNQGASNFQDNFMECQVTEEVITADDWVQSAGEERVEIPVGEVGAEQQIEYDDTEVPLPTDQDEYTASRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYIRKCDLMNHLKIHAYVPDPDVLDEEELPPLQLESEEKTKKKKTTKKRKISPAKLPKIKQELIDSDERYEVPSRSYNYVDEDVRLLTEMENHVNSNRNDSFSSYNDVDASMVEARYPILDPRKPFVCQHCGVAFAREKALASHARIHAGDSPFECETCNEMFWDVTVLREHVRTKHGGMANDSDYEDIDDDDYVDESKYGEFYCKVCGMRFHRTDLLRRHMRNHDDVKEEFNTDTEYAHVCNVCGQSFNEALDLLAHSESHARQMGHRCMLCGECFSDESAMANHVMQRHGKNMPPNTCMLCGKTCKDRRTLLKHSWDHSREKLFSCSKCGKSFHNKARLKRHMVSHRNKAVQCDVCGDDFPDGRSLMNHRHSHSNISGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPQYSHTMTPYCCSVCNDMFSTSQDLIIHLIHHCDLNTAMKRQPQVGPRKYKRRRKLKPHELELISNRVDNDNDIYSDSDEKSKRKSPKKVKPQPTSSNNKTNLEKNYEDVFQSFESAIQNINSLVNSKPAPARGRKKIKPAETQMSSMPSRPKMIHTQKTRVPIDAQDGRGKHKTKTLITRTTPAEHIVKEKITSVGERNRPRTKNVSYHVLQADKLPLATFADEDDLDQENTNPDNEYNNGIIIKPDPDASRHNDIEMEYQTVETEIPDVANEETVLAQVEEPSPEQLMPVSMIKVTKNVGKRNNSLTPGRHIIGPGNKVIRIVKGGMLISNKIKKEPELLVPDLENQQLLKHVKQEVVEPSPLHELAELSMQHAQNQFRCEMCSATFNDRSQLLMHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01104958;
90% Identity: -
80% Identity: -