Aful047373.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agonum fuliginosum
Gene Symbol
-
Assembly
GCA_947534325.1
Location
OX384042.1:12174216-12180307[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.0032 0.46 12.5 1.9 2 23 162 183 162 183 0.98
2 15 9.9e-05 0.014 17.3 3.2 2 23 190 211 189 211 0.97
3 15 0.00012 0.017 17.0 6.1 1 23 220 242 220 242 0.97
4 15 7.7e-05 0.011 17.6 6.5 1 23 306 328 306 328 0.97
5 15 0.004 0.56 12.2 1.7 3 23 348 369 346 369 0.95
6 15 0.0004 0.056 15.4 8.9 1 23 438 460 438 460 0.96
7 15 0.00067 0.095 14.6 1.8 1 23 466 489 466 489 0.95
8 15 3.4e-06 0.00048 21.9 0.9 1 23 494 516 494 516 0.98
9 15 3.7e-06 0.00052 21.8 3.3 1 23 527 549 527 549 0.97
10 15 6.6e-07 9.4e-05 24.1 0.4 1 23 556 578 556 578 0.97
11 15 3e-05 0.0042 18.9 1.6 3 23 590 610 588 610 0.92
12 15 0.00041 0.057 15.3 4.1 1 23 616 638 616 638 0.99
13 15 1.2e-05 0.0017 20.1 1.8 1 23 644 666 644 666 0.96
14 15 3.4e-07 4.7e-05 25.0 0.3 1 23 672 694 672 694 0.99
15 15 0.00024 0.034 16.0 0.1 1 23 700 724 700 724 0.92

Sequence Information

Coding Sequence
ATGATTAACAAAGATAATGCTTTGCCCCTGGACAAGATATGTCGTTCATGTATGACTGAAGGTAATGAAATGCGATCGGTATACGAAACCAATACTGATTCAGTGCAGCTTGCGGAAATGATAATGGCTTGTGCCTCAGTACAGGTCGTATCAAGCGATGGTCTGCCCGGCTTAATTTGCCCAAAATGTGAAGAGCAGCTAAACATAGCGTATCTCTTTAAACAACAGTGTGAAAGAACAGATGCAACTCTTAGAGAATACACAAATCACGATCACGCTATACCAGGAACTATAAAAGAAGAATCTGAATCACTAGACATTgttgtaaaaccagatattgatgtcttggagatatatgatgacaatgatggtggtcgtgatgatgacgatgatgatgatgatgatgtGTACTCTGGTTCCGAGAGTGTACATAGCAATTATTCAGCTACTGTGCGGAGAAAAAAGAAACCACCAAAAAATCGACAGTGCAGATTTTGTAACAAGATGTTGTCAACAAAAGAAGGTCTCAGACTACATGAAAGACGCCATACTGGTGAAAAACTAAAAACCTGCCCAGTGTGTCATGCAACATTCGCAAAATCCAATCATTTGCTTCGACACATGTCCATGCATAACAAACCAACAGACGAATACAAGCATACGTGCCAGGAATGTGGCATGGGTTTCACCAAGGCATCGCATCTACACAAGCATCGACGCGAACACAAAGATGGAACAACCGCAGAAACGGAAGCTGAAACCGGCGAAGCTGAAGCACCGGAAGATGAAGATCAGACTGCTGAACCAACAGCTACAGTCAAGAGTGAAGTGGATAGTGACAATGAAGTCGGAAATATAGCGACGAGTTCAAGACCCAAACTTAGACCAAAGAGAGAGCCGATTGATGTGAAGATACATTCTTGTAAGATTTGCTTGAAATCCTTCTCAAAAACCAATCATCTGAACCGACACATGTTAACACATGGTGTATCACAAGAAAAAAAGGAAAAATCAGAGCCCAAGGAGAAAAAGTACATGGCATGCGAATTCTGCGATCGCAAATTCGTATACCGCAAGAGTTTTCTGCACCACATTCAGCTCGAACACCAGATATCCGAAGATAGCGACACGCCGCTTAGTGAATATGCTACCATTGTAACAAAGTCCAAAGATGGAGCGACGGCTGCTGGTGGTAATGCTGAAAATGGCGGTGAAGGTGGCGTCCAGGTTGCTGCAGATGGCACAGTGCCACCCCTAGGAGGCGAAGACGACTTTGAAGAGTTCATGCGACAAGAAGAAGCAAAGAAATTGCATGTATGCCATGTGTGCAACCACAAGTTTACGCGTGCGAACCACCTCACGCGCCATATGACACTTCATCGCGCTGTGCTTATACAcaagtgtgaccggtgcgagaaggcgtttatgactcctgaacaccttgccactcatgtgcaggaataccatgtagatcggccgtacgtctgctcgctttgcaacaaaccattcagccgaggagaacacttaattcggcacttgaaagtacacgacaagaatcctggtaacgggaccgatgaacacaagtgttctatttgcgaaaaagtgttcgcacgttctgatcatcttgcacgacatactaagcttcatctagcgcaagataagcggcatgtgtgcggcgagtgcggcaaggcgttcaaccgcctagataatttgcgtactcatgcgcgcatccatacaggtgtgcgcgatccacagcggctacatctttgtatctactgcggcaaagagttcaacaattccagtaatatgattgtgcatatgcgtcggcatacaggcgaacggccgtataaatgtgcacagtgcggcaaaggtttcccgcgctcgcacgatctgaagtgtcacgagcgtactcacagcggcgagaaaccatacctctgtactctatgtggcaaatcctttaacaagagcaacaaactactgcgtcatactagagtacatactggtgaacgtccctatgtttgttcactttgtggtcgcgcatttacacaatccaatgaccttgcgctacatatgcgtcgacacacaggatcgagaccatatgcatgcggcatgtgtcccgcacgcttcatccagtctggacAATTAAAAGCTCATCGTCGTTCTCAAGGTCACTGGATTGAAACACAACCAGAATTAAAAGGAGCACACCGTGTTACACCTGTCACGCCACTCGTTAATCCGCCACCTATCAAGTTCAAAACGCGCGTTCAACGCATTAAAGAAGAACCATCAATATTAGGACACACCATCGGAGTAGGTGTTGGAGTTAACTTAGTGGGTGTTGTAGCAGCAGCTGCTGCGGCAGCCGCGGCTGCGGCTAACAAAGAAGCCGGTGAACAGCAGAATACACCTACACCAGATACCACCGGCTCGCCATTCTACGTACACAACCGGGACCAGCAACATCCACAGTCGAAAGACGAAGTGCATAACTTCAGTGTAACAAATCTAAGCCGTGATGCGAATGTCCCTGCGGCTTTTGTGCAACCGACTAGCGTCGGTGAGCCTGGCACCTCGTTTTCGAATAGCATTGCCATGACGTCAAACTCGTTCGTCGTGAGCGAGAACTACACTACATACCAGACGTACGGTTGA
Protein Sequence
MINKDNALPLDKICRSCMTEGNEMRSVYETNTDSVQLAEMIMACASVQVVSSDGLPGLICPKCEEQLNIAYLFKQQCERTDATLREYTNHDHAIPGTIKEESESLDIVVKPDIDVLEIYDDNDGGRDDDDDDDDDVYSGSESVHSNYSATVRRKKKPPKNRQCRFCNKMLSTKEGLRLHERRHTGEKLKTCPVCHATFAKSNHLLRHMSMHNKPTDEYKHTCQECGMGFTKASHLHKHRREHKDGTTAETEAETGEAEAPEDEDQTAEPTATVKSEVDSDNEVGNIATSSRPKLRPKREPIDVKIHSCKICLKSFSKTNHLNRHMLTHGVSQEKKEKSEPKEKKYMACEFCDRKFVYRKSFLHHIQLEHQISEDSDTPLSEYATIVTKSKDGATAAGGNAENGGEGGVQVAADGTVPPLGGEDDFEEFMRQEEAKKLHVCHVCNHKFTRANHLTRHMTLHRAVLIHKCDRCEKAFMTPEHLATHVQEYHVDRPYVCSLCNKPFSRGEHLIRHLKVHDKNPGNGTDEHKCSICEKVFARSDHLARHTKLHLAQDKRHVCGECGKAFNRLDNLRTHARIHTGVRDPQRLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCAQCGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHTRVHTGERPYVCSLCGRAFTQSNDLALHMRRHTGSRPYACGMCPARFIQSGQLKAHRRSQGHWIETQPELKGAHRVTPVTPLVNPPPIKFKTRVQRIKEEPSILGHTIGVGVGVNLVGVVAAAAAAAAAAANKEAGEQQNTPTPDTTGSPFYVHNRDQQHPQSKDEVHNFSVTNLSRDANVPAAFVQPTSVGEPGTSFSNSIAMTSNSFVVSENYTTYQTYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00769012;
90% Identity
-
80% Identity
-