Basic Information

Insect: Agonum fuliginosum
Gene Symbol: -
Assembly: GCA_947534325.1
Location: OX384046.1:14505026-14516819[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 2.8e-05 0.0039 19.0 3.1 1 23 798 820 798 820 0.97

2 25 7.3e-06 0.001 20.8 2.5 1 23 843 865 843 865 0.98

3 25 7.1e-05 0.0099 17.7 0.6 1 23 871 894 871 894 0.97

4 25 0.28 39 6.4 0.1 1 17 900 916 900 917 0.88

5 25 2.8e-05 0.0039 19.0 3.1 1 23 1105 1127 1105 1127 0.97

6 25 2.5e-05 0.0035 19.2 2.0 1 23 1150 1172 1150 1172 0.98

7 25 0.00021 0.03 16.2 1.4 1 23 1178 1200 1178 1200 0.98

8 25 0.00028 0.039 15.9 1.1 1 23 1206 1229 1206 1229 0.97

9 25 6.1e-06 0.00086 21.1 0.6 1 23 1235 1257 1235 1257 0.98

10 25 5.4e-05 0.0076 18.1 1.4 1 23 1263 1285 1263 1285 0.99

11 25 1.5e-05 0.0021 19.9 1.1 1 23 1300 1322 1300 1322 0.96

12 25 0.00038 0.054 15.4 5.3 1 23 1329 1352 1329 1352 0.95

13 25 2.5e-05 0.0036 19.1 1.7 1 23 1525 1547 1525 1547 0.96

14 25 0.35 50 6.1 3.9 1 23 1577 1599 1577 1599 0.97

15 25 1.3e-06 0.00019 23.2 3.0 1 23 1605 1627 1605 1627 0.98

16 25 6.2e-05 0.0087 17.9 2.2 1 23 1633 1656 1633 1656 0.95

17 25 1.1e-06 0.00016 23.4 3.6 1 23 1662 1684 1662 1684 0.99

18 25 0.00068 0.096 14.6 0.4 1 23 1690 1712 1690 1712 0.99

19 25 0.0024 0.34 12.9 3.2 1 23 1727 1749 1727 1749 0.96

20 25 2e-05 0.0028 19.4 3.4 1 23 1755 1777 1755 1777 0.98

21 25 8.9e-05 0.013 17.4 1.7 1 23 1783 1806 1783 1806 0.97

22 25 5.2e-06 0.00074 21.3 0.3 1 23 1812 1834 1812 1834 0.98

23 25 4e-05 0.0057 18.5 0.8 1 23 1840 1862 1840 1862 0.98

24 25 7.1e-06 0.001 20.9 1.5 1 23 1877 1899 1877 1899 0.98

25 25 0.00018 0.026 16.4 6.0 1 23 1906 1929 1906 1929 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	2.8e-05	0.0039	19.0	3.1	1	23	798	820	798	820	0.97
2	25	7.3e-06	0.001	20.8	2.5	1	23	843	865	843	865	0.98
3	25	7.1e-05	0.0099	17.7	0.6	1	23	871	894	871	894	0.97
4	25	0.28	39	6.4	0.1	1	17	900	916	900	917	0.88
5	25	2.8e-05	0.0039	19.0	3.1	1	23	1105	1127	1105	1127	0.97
6	25	2.5e-05	0.0035	19.2	2.0	1	23	1150	1172	1150	1172	0.98
7	25	0.00021	0.03	16.2	1.4	1	23	1178	1200	1178	1200	0.98
8	25	0.00028	0.039	15.9	1.1	1	23	1206	1229	1206	1229	0.97
9	25	6.1e-06	0.00086	21.1	0.6	1	23	1235	1257	1235	1257	0.98
10	25	5.4e-05	0.0076	18.1	1.4	1	23	1263	1285	1263	1285	0.99
11	25	1.5e-05	0.0021	19.9	1.1	1	23	1300	1322	1300	1322	0.96
12	25	0.00038	0.054	15.4	5.3	1	23	1329	1352	1329	1352	0.95
13	25	2.5e-05	0.0036	19.1	1.7	1	23	1525	1547	1525	1547	0.96
14	25	0.35	50	6.1	3.9	1	23	1577	1599	1577	1599	0.97
15	25	1.3e-06	0.00019	23.2	3.0	1	23	1605	1627	1605	1627	0.98
16	25	6.2e-05	0.0087	17.9	2.2	1	23	1633	1656	1633	1656	0.95
17	25	1.1e-06	0.00016	23.4	3.6	1	23	1662	1684	1662	1684	0.99
18	25	0.00068	0.096	14.6	0.4	1	23	1690	1712	1690	1712	0.99
19	25	0.0024	0.34	12.9	3.2	1	23	1727	1749	1727	1749	0.96
20	25	2e-05	0.0028	19.4	3.4	1	23	1755	1777	1755	1777	0.98
21	25	8.9e-05	0.013	17.4	1.7	1	23	1783	1806	1783	1806	0.97
22	25	5.2e-06	0.00074	21.3	0.3	1	23	1812	1834	1812	1834	0.98
23	25	4e-05	0.0057	18.5	0.8	1	23	1840	1862	1840	1862	0.98
24	25	7.1e-06	0.001	20.9	1.5	1	23	1877	1899	1877	1899	0.98
25	25	0.00018	0.026	16.4	6.0	1	23	1906	1929	1906	1929	0.95

Sequence Information

Coding Sequence: ATGGATTATAATAAAATACAACCACGGTTTCGAAAATACTGCCTGTCATGTAAAGTCTCATCAAAACAGTTAAAATATTTTAAATTTCCTGTTGATCATAAGAGACGACAAGAGTGGTTTAAAGCATTAGAAGTAGGCAACAATTCAAAAGAATATATTTACGTATGTAGTAAACATTTCATACCGTCTGATTTTAAACCAGGATGTGGAAGATCTAGACTACGTATTGAAGCAGTGCCTGCAATGATTAATAAGAGTGGAGCAGTAAATGAACAAACCGCTGAACAAATAAATGGCGAAACAAATAATTCAATTCTCAATTTCAATCACAGTTCGGAAACCTGTCTACAATCAGAAATAATAATTCCAGATCTACTATCCATCGAAGATAATGAAATAGATATGTCAAATATGATATCTGATCAAACCGAAACCGAACCAAACTCAAGTGATCTGCATATTGACGAACGAACACTCGAACACGACTACGCCAAAAAGATTATTGAACCTTTTACAAAAAAATGCACAACATGCATAGATTTTATAGTTAAAAATAAATCTCTCAAGGAAAAAAATAAAAGAAAAGAAAGGAGCTTATCCAAACTACGAAAAGAAAACTGTAAATTATTTGTTGCTGTACATTCGTACAGAAAACAACACATTTCGCACGCTATGTTTGAATTTGACGACGCATCTGTTAAATTTTACACCGGCTTGACAAGCTATACAATGTTTCGTACAATTTTTAAATATTTTTTACCTTTCGGTGTTAGGAAAGATAAATTTCGTCGGCGCAGAGCTACACTAAGTCCGGAGGACCAATTTTTCGCGTTTTTGATTAAAATGCGAACCAATTTTGATCTGAAACACATTGCATTTTTGTTTAATATATCTGTGCCTACTTTATCTCGCATTTTTAATTATTGGTTACGGTTGGCGTATGTAAAACTTCGCAAATCGAATATTTGGCCTAATCGAAATGTCTTATTGGAAAATGCTCCAAAAAATTTTAAAGAAAAATACCCGAAAGTTATAGCAAGTGTTGATTGCGTTCAATTGCATTTAAAAAGTATTTCTTTTAAAAAAAGCGATACCGTTTTGAAAGGCCTAATAGTAGTTGATCCCAAAGGAGGAATAATATTTTTATCGGAATTATATCAAGATAAGCTATCAGAAAAAGAAGTAATTTGTAAAAGTGGTTTCATAGATACAATAAAAAACAAACTATTAACTGATGATATATATCCAAGAGATGAAATAATTGCTAACAAAGTATTTAATATTAGTTCTAAACTAGAACCTGTCAAATTTTATTACCCAGAAATAAATGAAGATGGAAAAGACAGCTCCAGAGAATGTATAGACAAAGTTATTCACCGAATAAAACAGTTTAAAATAATTGATAATTTAAAAATATCACAATATAATACGATCGACCAAATTTGGGCTGTGGAGGGAAGCGTACTATTACTCCCGCGGGCGAAGCGGCGACCCGAGCCGCAGGCGAGTCCGAGCGAGGGCGCCGGCTTCGCCCAAGGGAGTAATTGCTATTACTCCCGCGGGCCAAGCGGCGGCTCGAGCGAGGGCGCCGGCTTCGCCCAAGGGAGCAATAGCCTTAACTCCCGTGGGACACACAATATTTTACGTCACGAGGGTCTCGAAATCACCTTTCTTGCAAGCGGGAGGAAAACACTGTTTTCCTCCCGCCAGTACCGGGAAGAAAACAGTGTTTTCCTCCGTACTTGCTTTCCTCCCGCGCGGGAGGGAAAACTCGCTTCCCTCCCTCCATTAGCAAGAGGAAAACACTGCTTTCCTCCCCCGAGTGACATACATTTTAGGCCAAATATTACAAAATATGTTTGCAAGAATTGTTTAGACAATTTAAACTACATTTATAAATTCAGATTGAAATGCTTAAGAAACATAACAATATTAGATGAATATGTAAAAGAATTACAAGCAAGTGAACTGAAGAAAAGTTTATCTGGTACAAATGAAAAAGATCCATTAGAACTTGTGAAACAAAACAAAAATAAAACATGTGAAAATAAAACACAAAATAATTGTCCACAAGATAATATTACAGTCGAGACAGTGTTTATTAAAGATGAAGTCGAAGAAACTAATAATGTATTACACGAAACTATTAATATTATGGAAGAAAACAATCACTCAAACTCACAAGATGATATCAAAGCAGAAATAACAGAAACACGGCAAAATGTTCTAGAAGATATTATAGTGAAGCAGGAAGATGAAGTTGCATTCGACGATTTTTCCGAATTTAATGATGAAAAACAAATTAGTGATGAAGATGAAAATACAAACAGTAGTAGTATAAGTGAACCCAACGATTGTGAGATTATCGACAAAGAATCTCAAAATGCGCTATACAAATGTACAGAATGTGAGAAATCATATTCCAGTGCTAGTTCCCTAAAGAAACACAGCCACGTTCACGCAAAAGACCGACCGTTAAAAAAACCTGGACGTCGAAAAACTTCAGGCAAACGAGAAAAAAAAATACATGAGTGTGAAATATGCCACAAAGTTTTCAAAACTGCATATCCCTTAAAGAATCATCTTCGTATACACTCCGACGAACGACCTTTCCAATGCACAATATGTGAAAAAGCATTCAAACAGAAACAAGTTCTTAACGAACATATTTCGAGCATGCACTCAGGGAAAAAGTCGCATATTTGTGATAAATGTGGAATGAGTTTTTACGTAAAAGGTTACTTAATACATTTTAGGCCAAATATTACTAAATATGTTTGCAAGAATTGTTTAAACAATTTGAACTATATTTATAAATTCAGATTGACATGCTTAAGAAATATGACTATATTAGATGAATATGTAAAAGAATTACAAGCAAGTGAACTGAAGAAAAGTTTAAGTGGTACAAATGAAAAAGATCCATTAGAACTTGTGAACCAAAACAAAAATAAAACATGTGAAAATAAAATACAAAATAACTGTCCACAAGATAATATTACAGTCGAGACAGTATTTATAAAAGATGAAATCGAAGAAACTAATAATGTATTACACGAAACTATTAATATTGTGGAAGAAAGCAATCACTCAAATTCACAAGATGATATCAAAGCAGAAATAACAGAAACACGGCAAAATGTTCTAGAAGATATTATAGTGAAGCAGGAAGATGAAGTTACATTCGACGATTTTTCCGAATTTAATGATGAAAAACAAATTAGTGATGAAGATGAAAATACAAACAGTAGTAGTATAAGTGAAGCCAACGATTTCGAGATTATCGATAAAGAACCTCCTCAAAATGCGCTATACAAATGTACAGAATGTGAGAAATCATATTCCAGTGCTAGTTCCCTAAAGAAACACAGCCACGTTCACGCAAAAGATCGACCGTTAAAAAAACCTGGGCGTCGGAAAACTTCAGGCAAACGAGAGAAAAAAGTACACGAGTGTGAAGTATGCCACAAAGTTTTCAAAATTGCATCTTCCTTAAAGGATCATCTTCGTATACACTCCGACGAACGACCTTTCCAATGCACATTCTGTGAAAAAGCATTCAAACAGAAACAAGTTCTTAACGACCACATGGTTAGGCACACCGGGGATAGACCATACATGTGCAATGTTTGTGGCTTAAAATGTTACACTAAAAATGAGTTATTGACACACATACGAATTGTGCACAACAAAATCCGAGCGTTTAAGTGTGAAGATTGCAACAAAACGTTTGCTAAAGCTAATGACCTCGTAAGACATTCCCGCATTCATAAAGGCATACGGCCGTTCAAGTGCACACTGTGTGATAGATCTTTCACAATGGCTAACACACTTAAATTACATGGTCGCACTCATCTGCGAAAACTGGATGACAGCAAACCTGAGAAAGAGAAAAAATTCGAGTGCAACGTTTGCCAGAAGAAGTTTAGTGATAAACGATTACTAAGAAGACATGGACTTATTCACACGATAGTAGGAACGCCGCATAAATGTCAAGATTGCGATAAAAGTTTCAAGTTTCAAAATTATTTGAGGCAGCATGAGCTCAAAAAACACCCACAAAAATTGAAATGCTTAAGAAACATAACAATATTAGATGAATATGTAAAAGAATTAGAAGCAAATGAACTGAAGCAAAGATTATCTGGTTCAAATGAAAAAGATCCATTAGAACTTGTGAACCAAAATAAAAATAAAACACATGAAAATGAAATACAAAATAATTGTCCGCAAGATAATATTACAGTCGAAACAGTGTTTATTAAAGATGAAATCGAAGAAACTAATCATGTATTACATGAACCTATTAATATTATGGAAGAAAACAATCACTCAAATTCACAAGATGATATCAAAGCAGAAATAACAGAAACACGGCAAAATGTTCTAGAAGATATTATTATAAAGGAAGAAAATGAAAATGTCAATCATTCTGACGTTGCATACGACGTTTTTTCCGAATTTAATGATGAAAAACAAATTAGTGACGAAAATGAAAATTCGAACAGTAGTAGTATAAGTGAACCCAACGATTGCGAAAATATCGAAACAGAACCTCCTCAAAATAAGCGATTCGAATGTACAGAGTGTGACAAAACATACGCCAGTTCTAGTGCCCTAAAAAAACACAGCCACGTTCACGCAAAAGACAGACCTTTAGACCTAACTAGCAGTGAAACTAAAAAACCAAGACGTAAAAAAGTTTCAGTTAAAAAAGAAAAGGAGCTACATGAATGCAGCGTATGCCACAAAGTCTGGAAATATAAAAAAGGCTTAATACAACACTTCAGTACACACACAAACGAACGACCTTTTAAATGCACAACTTGCGAAAAATCATTCAAACAAAAATCAACCCTTAAGGAACACATGAGCATTCACTCTGGGGAAAGGTCGCATATTTGTGATAAATGCGGTCAAACTTTTTACGTAAATAGTCATTTAGTAAGGCACATTAATAATGTGCACCTCAATATACGAAATtataaatgtaaagactgtggaaaaggctttaccaatagtcacgattttaataaccacacgcgtatacatactggagtaaaaccttttaaatgtaccatttgtgataTGTCATTCACATGGGCTACCGCGTTAAGAATACATAACCGCACACATCGTAATGAATCAGACCCAGCGTGCGAAATGGAAAATAAAAAACACGTGTGCGTTGTGTGCCAAAAAAGGTTTTACTTTGCAACTCACCTAAAAATACACATGGTATCACATAGCAACGAACGACCCCATGAGTGTACAGTTTGCCACAAAACTTTTAAGCTTCCAAATAACCTTAAAGAGCACATGGCAACGCACACCGGGGATAGACAATACATGTGCAATGTTTGTGGCTTAAAAACTTACACTAAAAGGCATTTGTTGAGGCACATACGAGTTGTGCACAACAATATCCGAGAGTTTAAATGCGAAGACTGCAATAAAGCGTTTGCTAAAGCTAATGACCTCGAAAGACATTCCCGCATCCATAAAGGCATACGGCCGTTCAAGTGCACACTGTGTGACAGATCTTTCACAATAGCTAACAATCTCAAAGTGCACAGCCGCATTCATCTACGGAAACCGGATGACAGCAAACCTGAGAAAGAAAAAAAATACGAATGCGAAGTTTGCCAGAAGAAATTTAGTAATAAACGATTACTAAGACGACATGGACTTACTCACACGATCGTAGGAACGCCGCATAAATGTCAAAATTGCGATAAAAGTTTCAAGTTTCAAAATAATTTGAGGAAGCATGAACTCAAAAAACACCCACAAAAGTTAGATGTATAA
Protein Sequence: MDYNKIQPRFRKYCLSCKVSSKQLKYFKFPVDHKRRQEWFKALEVGNNSKEYIYVCSKHFIPSDFKPGCGRSRLRIEAVPAMINKSGAVNEQTAEQINGETNNSILNFNHSSETCLQSEIIIPDLLSIEDNEIDMSNMISDQTETEPNSSDLHIDERTLEHDYAKKIIEPFTKKCTTCIDFIVKNKSLKEKNKRKERSLSKLRKENCKLFVAVHSYRKQHISHAMFEFDDASVKFYTGLTSYTMFRTIFKYFLPFGVRKDKFRRRRATLSPEDQFFAFLIKMRTNFDLKHIAFLFNISVPTLSRIFNYWLRLAYVKLRKSNIWPNRNVLLENAPKNFKEKYPKVIASVDCVQLHLKSISFKKSDTVLKGLIVVDPKGGIIFLSELYQDKLSEKEVICKSGFIDTIKNKLLTDDIYPRDEIIANKVFNISSKLEPVKFYYPEINEDGKDSSRECIDKVIHRIKQFKIIDNLKISQYNTIDQIWAVEGSVLLLPRAKRRPEPQASPSEGAGFAQGSNCYYSRGPSGGSSEGAGFAQGSNSLNSRGTHNILRHEGLEITFLASGRKTLFSSRQYREENSVFLRTCFPPAREGKLASLPPLARGKHCFPPPSDIHFRPNITKYVCKNCLDNLNYIYKFRLKCLRNITILDEYVKELQASELKKSLSGTNEKDPLELVKQNKNKTCENKTQNNCPQDNITVETVFIKDEVEETNNVLHETINIMEENNHSNSQDDIKAEITETRQNVLEDIIVKQEDEVAFDDFSEFNDEKQISDEDENTNSSSISEPNDCEIIDKESQNALYKCTECEKSYSSASSLKKHSHVHAKDRPLKKPGRRKTSGKREKKIHECEICHKVFKTAYPLKNHLRIHSDERPFQCTICEKAFKQKQVLNEHISSMHSGKKSHICDKCGMSFYVKGYLIHFRPNITKYVCKNCLNNLNYIYKFRLTCLRNMTILDEYVKELQASELKKSLSGTNEKDPLELVNQNKNKTCENKIQNNCPQDNITVETVFIKDEIEETNNVLHETINIVEESNHSNSQDDIKAEITETRQNVLEDIIVKQEDEVTFDDFSEFNDEKQISDEDENTNSSSISEANDFEIIDKEPPQNALYKCTECEKSYSSASSLKKHSHVHAKDRPLKKPGRRKTSGKREKKVHECEVCHKVFKIASSLKDHLRIHSDERPFQCTFCEKAFKQKQVLNDHMVRHTGDRPYMCNVCGLKCYTKNELLTHIRIVHNKIRAFKCEDCNKTFAKANDLVRHSRIHKGIRPFKCTLCDRSFTMANTLKLHGRTHLRKLDDSKPEKEKKFECNVCQKKFSDKRLLRRHGLIHTIVGTPHKCQDCDKSFKFQNYLRQHELKKHPQKLKCLRNITILDEYVKELEANELKQRLSGSNEKDPLELVNQNKNKTHENEIQNNCPQDNITVETVFIKDEIEETNHVLHEPINIMEENNHSNSQDDIKAEITETRQNVLEDIIIKEENENVNHSDVAYDVFSEFNDEKQISDENENSNSSSISEPNDCENIETEPPQNKRFECTECDKTYASSSALKKHSHVHAKDRPLDLTSSETKKPRRKKVSVKKEKELHECSVCHKVWKYKKGLIQHFSTHTNERPFKCTTCEKSFKQKSTLKEHMSIHSGERSHICDKCGQTFYVNSHLVRHINNVHLNIRNYKCKDCGKGFTNSHDFNNHTRIHTGVKPFKCTICDMSFTWATALRIHNRTHRNESDPACEMENKKHVCVVCQKRFYFATHLKIHMVSHSNERPHECTVCHKTFKLPNNLKEHMATHTGDRQYMCNVCGLKTYTKRHLLRHIRVVHNNIREFKCEDCNKAFAKANDLERHSRIHKGIRPFKCTLCDRSFTIANNLKVHSRIHLRKPDDSKPEKEKKYECEVCQKKFSNKRLLRRHGLTHTIVGTPHKCQNCDKSFKFQNNLRKHELKKHPQKLDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -