Basic Information

Gene Symbol
Trerf1_1
Assembly
GCA_947534325.1
Location
OX384032.1:35578771-35587827[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-08 0.00013 23.5 0.0 2 46 933 977 932 977 0.96

Sequence Information

Coding Sequence
ATGGATCAGTGGATACCGTATTACTATCGATTTTATCAGTCTCAACAAACAACGTCAACAAAAACCAATACTAGCAGTACCGGATCAAATGCGGCGCAGGTGAAATCAACGAACGCAACATCGGGTACCGCCCCAGCGACAGTACCGTCAAGTGGTGCCGCCGCCACGTCCACCACCGCCGCCGGCGCCGCCGCCGCCGCACCCAAACCTGAACTCAAACCCGTCGAGTGCAACTTGTGTCATAGGAAATTTAAAAATATACCAGCACTCAATGGGCATATGCGGCTCCATGGCGGCTACTTCAAGAAAGATGCCGAGAACAAAAAGTGCGAAAAAAAAGAAACCACGGGACCTCCGCTGCAAACGGCCAGCGTCAGCGTGCGCGCCCTCATTGAGGAGAAGATCATTAGTAAAAGAACAACGAACCCAACGTCAGCGCAGCCGGTCAGCTGTAGCACGACTACCACAGCACCCAGCACTGCGCCGGGAAGCGGTACCAATGCAGCGCCTACTACGCCTAGTGAAAGCACCGCGCCACCTCTCTATCCGTTATCCATGCATTCCACGGGCGACGCGGAGGCCAGCGCCAAGGTGACGTCGTTCGTGGTTCCTGCGCCGCCGCCCGCGCCGCCCGCCACCGCGCCCGCCCCCGCCGCCTCCGCCGCCGCCGCGGCGCGACGACATTCCGACGCCGAGTTCACCGTGCCCCGCGCGCCCTCCGTGCAGCAGGAGGCCGAGGCCCTGGCCGACATGATCCTCAAGCGCGGCGCCAAGGTCTCCGTCAAGCGCGCCATCTCCGACCCCGGCAGACCTTCCCAGCAGATCCAGCTCCAGTTCCAGCCGGGCGATGCCTTCGCCCTGGCTGGTGTCACGTACCAAGCGGAAGATGTCGGCTACCTCTCGCCCAGTCTGCAAGATGACGTGTTTCACCAAGTGCAAGACACCATGCTTCTACAAGGAGTCGATCCGCAACAGCTTGTTCAGATTCAAGCGTCGCTGCTTCAAGAACAAGACGAACAACTCCAGGATATCGCCTCGCTGGAGGATTACGCCACAGTGACAGCGAGCTTGCAAGAGACAGTGGTAGATTCTGCAACATATCAAGCTAGGCAAGTAGTGAATCAGGAACTGCAAGCGGTACTGGATTCACCGTTACCGGAGAGTTTAGCAGAGTTCAGCACGTTCCACTCTAGTAACTTGGACATGCCGTCGCCGTCATATCAGACGCAATCGCCAGCGCAGCAGTTCACGAACTCGCCGCACACTTCCCTGGCGGCGCAGTCTCCACTGCAGTCGCCGTTGATAAGACATGACTCTCCTGGTTTTGCATATCCTACGCCTCCGGCGAGCCATGAAGGACAGAGTCCATCATTTGTACAGACTTCTTTGTTACCGATGATTTCACCTCAACAAACCACGGACTTTGTACAGAACGTAAACGCGACGAGAGATCCGGAGGAACCACCTCAGGCGTCATCTCCGCTGTCTGCGGCATTCTTCACTTCAACGATGTCGAGTGCTGCAGCGGTAGAAGAAGCTTTAGAGGAAGTGTTACCTGGTGAAAGTATATCACCAGATGATATCTATCCTTCCTTATCAAATTCCCCGCCCCCGCAATCTCCTATCTCTGTTGCGATGACGCCTGTTCCATCTCCATTATCAAGCATACCTACCTCTACGACTTCAGTACCTTCTCCGAGGCCTCCGGCGTCGTTTACGCCAGTTTCAACAAACATCACGTTTCCAATGTCGCCTCTTTATACGTTTCAGTCTCAAATGATGCCTAACTCTGATGATCCCCTGCTATCCAGCAGTCCTAAAGACTTCTCAACGAGAAAACGGTTCGATTTCGCCAGTTTACAGTCTGTGAAGATTGTAGGAAATGGATACATCGATTTTGGAAACCCCAATCTAGCTGGAATTCTCGTAGACAATAACGGAGAGTTGAAATTTATTCAGACTTCGGGATGTCCGATTCAAGCGAAGAATCTTATAGTTACTACAAATATGCCATCTCCTAATACAACGATTAAAGAAGAAGTTAAAAATGTTCCTGTGCACAGACTGCAGAAAATAAGCAAAACAACGCAGTGTACAATAGCAGCGAACAAGAATTCTATTCAGAGGCCTAAACTGCATGTTGCGGTAGACAACATTAAAACTGAAGAGGGTAGCGACGTTTTTCTCAGCCCCACAACCATTCCGGCGAGTCCGAACAGGATATCAAGAAAAAGGCCTCGATCGGAGCCACTTCAACTTCCGGTTGTCCATCAGTCGCGCCTTCGGGCAGCTCGAGGACGACCTCCGGGTGCAGCTCCGTACACGCCTTTGCCGATGTTAAATCCATCGCGACGCGGACCTGGGCTATATTTGAATGCCAAACTAAAAACAACTGTAGCTAATTCTCAAAATAATCAAGATGATAGTTCTATATCATCGACTTGTGAGTCAGTCCCCGAGAGTGATTCAACTCCTCATATAAACGTTGGTTCTCATTATCAATGTACAATACCTCCATGTAAATTAGGAAGAGATAAATATGATAGAGAACCCACGTATGAACACCTTTTGTGGGATCCTGGTATAAACAACTACTGCACAGACAATGAAGTTGACATGTACTTGGATTTTGCGTGCTGCGCCGCAGTTCCCGGTGGTGGAAGAAATAAAGAATATGCTCTGCATTTGCTGCACATGTGTGGCGGAAATATTCATGAAGCAATGTTAAAGTTGATGCAACCAACGCCAGCGTTACCACCAGACCACCCGCTTTTACAGTATCATTATTCGGAAAGCGACCGATGGACGATTTCTGAAACTGAAGCCTTCCATCAATCTATATTGAGACATGATAAAGATTTTTTTAGCATTGCGAGAGATATCGGTACAAAAACTGTAAAACAATGTACACAATTCTACTATGTTTGGAAGAAAGTCTGTGCGGATGAGTATAGAAGGCTCCGATTAAATCGAGAGCAGAAAGTATATGCCAGTAGCAAAACTAACCATGATGTCGACTTTGAAGAGAAGCCTTGTTTGGATACCAAACTGCTTGGGATTGCTGAAACGGAATCTCCCATGTCTGTGACAGAGCACAGACATTTTAGCTGCGATTATTCCGACTGTTCTGCGAGTTTCAACTCGCGGGCCGCTTTGACGGGCCACATCCGGATCCACGGCGGCGGTGTCCGGCAATCAACGACTCCCACCCCCCATATAGAGAGGCGAGTAAACAGTATCACGCCTACACCTGTTACAGCGGAGCTCACGGAAGAGTTCCCCTGCAAAATATGCGGGAAGGTGTTCAGTAAGATAAAAAGCAGAAGCGCGCATATGAAGTCCCATCGGCCGCCGGACCTGGAACATAAGAAGAAGCATAGCGAACCCGTGAACAGCCTAGTTCCTGACACGACCATATCAAGTCCAGCCGTGCACGCACCGTGA
Protein Sequence
MDQWIPYYYRFYQSQQTTSTKTNTSSTGSNAAQVKSTNATSGTAPATVPSSGAAATSTTAAGAAAAAPKPELKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKETTGPPLQTASVSVRALIEEKIISKRTTNPTSAQPVSCSTTTTAPSTAPGSGTNAAPTTPSESTAPPLYPLSMHSTGDAEASAKVTSFVVPAPPPAPPATAPAPAASAAAAARRHSDAEFTVPRAPSVQQEAEALADMILKRGAKVSVKRAISDPGRPSQQIQLQFQPGDAFALAGVTYQAEDVGYLSPSLQDDVFHQVQDTMLLQGVDPQQLVQIQASLLQEQDEQLQDIASLEDYATVTASLQETVVDSATYQARQVVNQELQAVLDSPLPESLAEFSTFHSSNLDMPSPSYQTQSPAQQFTNSPHTSLAAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPSFVQTSLLPMISPQQTTDFVQNVNATRDPEEPPQASSPLSAAFFTSTMSSAAAVEEALEEVLPGESISPDDIYPSLSNSPPPQSPISVAMTPVPSPLSSIPTSTTSVPSPRPPASFTPVSTNITFPMSPLYTFQSQMMPNSDDPLLSSSPKDFSTRKRFDFASLQSVKIVGNGYIDFGNPNLAGILVDNNGELKFIQTSGCPIQAKNLIVTTNMPSPNTTIKEEVKNVPVHRLQKISKTTQCTIAANKNSIQRPKLHVAVDNIKTEEGSDVFLSPTTIPASPNRISRKRPRSEPLQLPVVHQSRLRAARGRPPGAAPYTPLPMLNPSRRGPGLYLNAKLKTTVANSQNNQDDSSISSTCESVPESDSTPHINVGSHYQCTIPPCKLGRDKYDREPTYEHLLWDPGINNYCTDNEVDMYLDFACCAAVPGGGRNKEYALHLLHMCGGNIHEAMLKLMQPTPALPPDHPLLQYHYSESDRWTISETEAFHQSILRHDKDFFSIARDIGTKTVKQCTQFYYVWKKVCADEYRRLRLNREQKVYASSKTNHDVDFEEKPCLDTKLLGIAETESPMSVTEHRHFSCDYSDCSASFNSRAALTGHIRIHGGGVRQSTTPTPHIERRVNSITPTPVTAELTEEFPCKICGKVFSKIKSRSAHMKSHRPPDLEHKKKHSEPVNSLVPDTTISSPAVHAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00767655;
90% Identity
iTF_00029747;
80% Identity
iTF_00029747;