Aful042720.1
Basic Information
- Insect
- Agonum fuliginosum
- Gene Symbol
- -
- Assembly
- GCA_947534325.1
- Location
- OX384043.1:18655390-18657948[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-10 3.4e-07 31.3 0.0 2 38 16 51 15 55 0.90
Sequence Information
- Coding Sequence
- ATGCCTAAAACAGAAGATGGTCAAAGATATACCAAAAAATATTCTGACGAGCAACTTTTAAAAGCAATTACAGCTGTACGTTCAGGGATTTCcaaaagagaagcatcaaaattgtacgatgtgcctcgtgcaactattcagtttcgtttatctgagaaatttgtgaaagttcggcatggtcctgcaactgtattaagtactgaagaagaacaaataatcgtacattggattaaggaatgtcatagaaagggatttcccagaagaaaagaagatatccaagcttcagtcaaacagttcctggatgatcagcctcgaacaaatccatttaataataattaccctggtgaaggctggtacaaagcctttataaagcgtcaccctgaactatcagtacgaaaatctgaagcaattactgctgcatcagcaaacataagcgaacaagatgttaaaaaatggtttgctgatatttactcatatttggatcaagagggatttgctgaaatactaaactacccagagagaatttttaatggggatgaaacaaattttcagctgtgtcctcaaaacaaaaaggtcttagcacccaagggagctaagaatgtatacgaaatagattccggacaggcgaaaagtaccctaactgtaatgtttacattcagcgctacaggagaaacaactccaccattagtaatctacccatataagagattgcccaaagaaatttcggattctgttccggaagattggggtctgtcatgcagcgacacaggttggatgaagaccgaaatattttacgaatacatcggaaatatatttcacccatttgtaaaaaaacataatattacatttcccatcattttatttgttgacggacataaaacccatcttgatagaaagttaagtgatttatgtacaaaactggatattattttagtatctttgtacccgaatgctacgaggctcttacaaccatgcgatgtttctacattcaaacccttaaaagatggttggagaaaaggtgttgtggaatggcgaagaaaacatccaaccgaagaattaactaaaagtaaatttgctcctatactgaagagcgtaattgaaaattctattcgtcctgaaattataataaatggttttaaagcttgtgggatatatccgtggaatgcagaagctatagatttcagtaagtgtttagggaagaacacgaaacatattaaaactaaaaacgacatagtagaaccatctgatattactgttatcagatatgaaacgttcaaaaaaattgtaggtgtaaataaaattaaaaaattcaaaactttaGACAACATATTCGACGAAGAAAATGAGGAATTTAAAATATTGTACAATCTATGGAAAGAATTTAAGACGGAAGAATTCGTTGAAATTGACAGCAATGAAGAAAAAGAAGTAGTAACTGAGGAATCAACTGCGACAGAAGTGGTACAAAATAATATTGAGGTTGATTTGTTTACCAGCAGCCAAAACGAAATTGATAAAGCGAATTTAGAAGAAACACAAATAAATAGTAATAATATGTTGGAAACTGATATTTTTGAAGAAAGACCTGTACAAATTGAGTTGTTAAACACAAGCTTTAATGAGAATGATACAATAAAAGAAATATTAACAGACGAAATCAATTTATCCGAAAATATATTTGACATTGAAAATATGCCTGTGATCTTTGCAAGAAATGAGAATGAAATAGTAAAATATGTCTCAAATAAGCCAACAGATCTACAAGTAGAAGTTCTCAATAGTGTGAAAAATTCAGAGAATTCTGAAAATTCTATCAAAGAACATCAAAACTTTGATTTTGCATTACCATCACCAGAAAAGAAAGAGCCGATAATATCAATTGAGAATCATTTGAATTGGCCTGTAACTCCAGAAAGAAAAGGGAAGCGAAATATTGAAAGAATGCCATTTGTAATTACATCATCATCTTGGAAAGCATTGAAAGATAAAAAGGAAATAGAAAAGAAAACAGAGCTCGATGCAAAAGAAAATAGAAAAAGAGAAAGAGAAACTAAAAAAATTGCCAAAGAACAGGAACAGAAGTCGAAGAAGAAACGAACTACAACGAAGAAGATTAAACAAAATGAAATTAAAAATACACCTAACAAGTTAATTCAATCTAGTACTACCACATCAGAAAATTGCAATGTTAAAGAAAACAATCCAAATTCTACTATTGCAGTACTAAATATCAAAACAGAAAACACAATCTTGCAATCAAAGACTAAATTCAACATAATTTCTTGTGAAGTAATAAAAGAAGCAAACACAGAAACTCAAGATAATCAATTGCCACTACAAAATTCAATGGAAACAGAAGACGATGAAAAATTGTATTTCCCAGAAAATAAAAGAATGCATGTTGGCCTATGTTATATTTGTGTCGAAAATATGTCAAAATTTCATATTGGCATAAAATGCGGCATTTGTAATAGAACATATCATATAAAATGTCTAAAAGATAAGCAATCTGAAAAGATTGACAATAAGTTGTATTTATGTAATACATGCACTGGGTAG
- Protein Sequence
- MPKTEDGQRYTKKYSDEQLLKAITAVRSGISKREASKLYDVPRATIQFRLSEKFVKVRHGPATVLSTEEEQIIVHWIKECHRKGFPRRKEDIQASVKQFLDDQPRTNPFNNNYPGEGWYKAFIKRHPELSVRKSEAITAASANISEQDVKKWFADIYSYLDQEGFAEILNYPERIFNGDETNFQLCPQNKKVLAPKGAKNVYEIDSGQAKSTLTVMFTFSATGETTPPLVIYPYKRLPKEISDSVPEDWGLSCSDTGWMKTEIFYEYIGNIFHPFVKKHNITFPIILFVDGHKTHLDRKLSDLCTKLDIILVSLYPNATRLLQPCDVSTFKPLKDGWRKGVVEWRRKHPTEELTKSKFAPILKSVIENSIRPEIIINGFKACGIYPWNAEAIDFSKCLGKNTKHIKTKNDIVEPSDITVIRYETFKKIVGVNKIKKFKTLDNIFDEENEEFKILYNLWKEFKTEEFVEIDSNEEKEVVTEESTATEVVQNNIEVDLFTSSQNEIDKANLEETQINSNNMLETDIFEERPVQIELLNTSFNENDTIKEILTDEINLSENIFDIENMPVIFARNENEIVKYVSNKPTDLQVEVLNSVKNSENSENSIKEHQNFDFALPSPEKKEPIISIENHLNWPVTPERKGKRNIERMPFVITSSSWKALKDKKEIEKKTELDAKENRKRERETKKIAKEQEQKSKKKRTTTKKIKQNEIKNTPNKLIQSSTTTSENCNVKENNPNSTIAVLNIKTENTILQSKTKFNIISCEVIKEANTETQDNQLPLQNSMETEDDEKLYFPENKRMHVGLCYICVENMSKFHIGIKCGICNRTYHIKCLKDKQSEKIDNKLYLCNTCTG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00028655; iTF_00028656; iTF_00028663;
- 90% Identity
- iTF_00028655; iTF_00028656; iTF_00028663;
- 80% Identity
- -