Aful020119.1
Basic Information
- Insect
- Agonum fuliginosum
- Gene Symbol
- -
- Assembly
- GCA_947534325.1
- Location
- OX384046.1:12220162-12222306[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-10 2.6e-07 31.7 0.1 3 36 18 51 16 57 0.91 2 2 8.6e-07 0.00074 20.6 0.1 3 36 112 145 110 151 0.87
Sequence Information
- Coding Sequence
- ATGTCTGAACAAAATACAACAAACCATCGAAAAAGAATTCGTGTCTCTTCTGAATCGATGCAGAAGGCTATAACTGATGTTTTAGTAAATAAAATATCAATCAGAAAAGCTGCTTACAAATTTAGTATATCAAAATCTACATTAGATAGAGCTGTTTGTAATGCGAGAAAATTAGAGAATCCTTCTGAATTTTTGCACAGTCCAAACATTGGAAAAAGAAGAAAACTTTCGTTGGAACAAGACAATAATCTTGTAAATTATTTGCATACTGCTTCCGAAATGTGTGACGAACAAAATATAACAAACACTCGAAAGAGAATTCCGGTCTCTTCTGAATCGGTGCAAAAAGCTGTAACTGAAGTTTTAGTAAATAAAATGTCACTCAGAAAAACTGCTTACAAATATAGTTTATCAAAATCTACATTAGATAGAGCTGTTTGTAAAGCGAAACAATTAGAGGACCCTACTGATTTTTTGCACATTCCACCAAACATTGGAAAAAGAAGAATATTTTCGTTGGAACAAGAAAATGCTCTTGTAAATTATTTGCATACTGCTTCAAAAATGTGTTACGGATTAGACACAAGAAGCACTAAGGAACTAGCGTACAAATATGCTCTTCATCTAAAATTGTTGTATCCAGGTACATGGGATGTAAATAAACGGGCGGGCATTGATTGGTGGAGAAGTTTTATCCAACGTCATCCAGAATTATCTCTGACAAAACCTGAAAATACTGTCGGAGCATTTTTCCGTAATTTATACAAAGTCTATCTAGCAAATAATTTTACTCCGGATCGCATTTTTAATTGCGACGAAACAGGTTTATCGACTGTTCCCGATCCACCAAAATTTGCGGAACGTGGAAGTAAAGTTACTTCAGCAGAACGAGGAACTTTAGTAACCATGTTAAATTTTATTAGTGCTAGTGGCAAAACTAGTCCACCTGTCTTCATATTTCCCCGAACAAGTTTCAAAGACTGTATGATGCAAGATGCACCAACTGGTAGCTTGGGTTTGGCATATAAGAGTGGTCGGATGACGGAAAGTAATTTTTTTCTTGCCATTAAACATTTTGTAGCCCATGTAAGACCAACAAAAGAATCACCGGTTCTATTGCTTCTAGACAATCATGATTCTCATATTTATATAGACACCGTTAATTACGCAAAAGAAAATAATTTAATCTTATTAACATTTCCACCACATTGCAGCCATAAACTGCAGCCCCTGGATGTGTCAGTATATGGCCCGTTCAAATGTTACTTCAAGCAAGTTCAAAACGACTGGATTGTGGCTAATCAGGGACAAATCCCAAAAATTCATCAAATGGCCAAGCTCGCAAACAAAGCTTTTATCAATACATTTACACCGCGAAATATATTATCTGGATTTTCTAAAACTGGAATATTTCCATTCAATAAACTAATGTTCACGGATTCAGATTCAGAACTAGCAATATCTTCATCGATATCGATAAATGCACCATCCACATCTGAACATATACGACCATATCCGAAAATCTATGAAAGGAAAGATTCGTATCGAGGTAGAAAGAGAGGAAAAACACGAGTTCTTACAGACACACCTGAAAAAAATGAAATAGAAAATGATTATAACTTAAATAAAATTAAGAAACTTAAAAAAGACACAAAACCTCTTAATTTTGACTGTATTAGTGAAGAATCTAAACATAAAAGGCTTACAAAATCAATTATTCTTGAAGACGAAAGTAGTAGTGAAGAATCCTGTAATATAGAATATGCCGATTCTGATAAAAGTGAAGAATTTTTATCTGAACTGCGAGACCGAAAGATACAAGAAATAAATATGAACAAAACATTTCAAAAAAATGATTTTATAATCGCCAGTTTTCCAACAAAAAAAAGTATAAACAATTACGTCGGACAAATTTTGGAGAAGAATCAAAATGATAGTTATAAAATTAAATTTCTAAGACGAAAAAATAAAATTAACCATTTTATATATCCTTCGCAAGAGGATATTTGCGATGTCATAGAACAGGATATAAAAACAAAACTTCCAAATCCAGATAGAAATTCTGGTACCGCAAGATGCCAATCAATGTTAAAATTTGATTTTGATTTTGAAAGCTATGAAAAAAGATTTGGAAAAGTTATGTAA
- Protein Sequence
- MSEQNTTNHRKRIRVSSESMQKAITDVLVNKISIRKAAYKFSISKSTLDRAVCNARKLENPSEFLHSPNIGKRRKLSLEQDNNLVNYLHTASEMCDEQNITNTRKRIPVSSESVQKAVTEVLVNKMSLRKTAYKYSLSKSTLDRAVCKAKQLEDPTDFLHIPPNIGKRRIFSLEQENALVNYLHTASKMCYGLDTRSTKELAYKYALHLKLLYPGTWDVNKRAGIDWWRSFIQRHPELSLTKPENTVGAFFRNLYKVYLANNFTPDRIFNCDETGLSTVPDPPKFAERGSKVTSAERGTLVTMLNFISASGKTSPPVFIFPRTSFKDCMMQDAPTGSLGLAYKSGRMTESNFFLAIKHFVAHVRPTKESPVLLLLDNHDSHIYIDTVNYAKENNLILLTFPPHCSHKLQPLDVSVYGPFKCYFKQVQNDWIVANQGQIPKIHQMAKLANKAFINTFTPRNILSGFSKTGIFPFNKLMFTDSDSELAISSSISINAPSTSEHIRPYPKIYERKDSYRGRKRGKTRVLTDTPEKNEIENDYNLNKIKKLKKDTKPLNFDCISEESKHKRLTKSIILEDESSSEESCNIEYADSDKSEEFLSELRDRKIQEINMNKTFQKNDFIIASFPTKKSINNYVGQILEKNQNDSYKIKFLRRKNKINHFIYPSQEDICDVIEQDIKTKLPNPDRNSGTARCQSMLKFDFDFESYEKRFGKVM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -