Aful041690.1
Basic Information
- Insect
- Agonum fuliginosum
- Gene Symbol
- -
- Assembly
- GCA_947534325.1
- Location
- OX384043.1:6805320-6835553[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-11 1.2e-08 35.9 0.0 1 39 431 470 431 474 0.90 2 4 3e-12 2.5e-09 38.1 0.1 1 39 485 523 485 526 0.95 3 4 6.6e-18 5.6e-15 56.2 0.0 2 45 541 585 540 585 0.96 4 4 4.2e-19 3.6e-16 60.0 0.0 1 43 592 635 592 637 0.96
Sequence Information
- Coding Sequence
- ATGAATAAAGCAGAAACTGCTACCTCTAAACACGCAAAATTTGTTACGAAGACATTTTCGGTCCTAATTCTCAATTCTCGTGCTCCAAATTCTCTCACTCCACCCAGTGAACTTCGCTCTTCATCTTCACTTTCATCTTCCGTTTCCTCGCGAGCGTGTCCTCTCTTACGTTGCTTCGAGCACGCAGCTTCCCTTCTCGGATCCGCCCCCACTGCGTTCGTTCTCGGCCAGTCTTTGTCCGCCCGCCGGCCCGCGAACTGTCGGCAAGGTCACGCACAGGTCGCCGCAGAACCAGAACCCCTCGCCCAGCCGGACTTACAACAAACAGTGCCCTCCCTTGCTGCCGGTCCTGCTGAGATCACATGGGAGGCTGAGGCTGCTGCTGAGGCTGTACAGCAGGCAGGGTTACAAGCACAGCGGCTCGCTCTGCGCTACACGCAGCCAGCGAAAGTGAAGGGAATCAATACTCGGCTGGGTTCAAGGGCACTGCCGGCAATGCTGCACACGAGGGTAGAAGAGATGAGGTCACTCCTCAAAACAGCGGACCAGCTGAAGATCAAGGGCCTGTGCGAGGTGTCCGAAGACAAAGAGAACAAAGCAGCACCAGGAGGCGGCCGCGAGTCTCCAAGTCTTCACCGCACGCCGCCGAAGTTCCGGCGACTGTTGAACAAGCGGCCCAGGTCCTCCGAGGGAATCCGCAAGCCGTTCAAGAAGGAGTATGCGGAGCGCATCGAGAGCCTCAGTGTAGATGACCCGGCGGATGAAGACAATGATATGCCAGTGATAGTGGAGAGCCGAGGAAAGCATAACGGGCAAAATATGACTGGCCATGGCTTGCTACCGACAAATGCTCTGTTCCCGCAGCTGTGCGTGGACAACGAGGAGTTCCCGCCGGAGCCTCCAGGGCCTGCCGCGACCCCCGTGCGCCACGTGGAGCTGCACGAGTGCTCGCCGCCCAGGACGCTCCTCACCAACACCGAGTCCTCGCAGAGAGGGGAGTTAATAGAAACAAGTCTAGGAGATGAACCCCCGGTGAAAATAAAACTAGAAACATTAAGATCTCTGGATCAGTCAGACACAATAGACATAGATAGTCACATGTCTAGTCACTCCATGGGCAGTCATAGTGAAGAAGAACAAGGAATGCATACAATGATGATCACTCCTGAACTTATGGGCCTAATACCTACTTCTAGCTCACATTCCGAATTAAGTAACGAAGGCATCCTCAAAAGCAACGGCCACAGTACGTCAGATTCCCACAGACACACCGGCGGCCCAAAAACATGGACACAAGAAGACATGGAACTGGCGTTAGACGCGTTAAGAAACCACAACATGAGTTTAACAAAAGCGTCGGCAACTTATGGAATCCCTTCAACAACTCTATGGCAACGAGCACATCGGCTAGGAATAGACACACCAAAGAAAGAAGGGCCTACAAAATCCTGGACAGAAGATAATTTAAATTCTGCTCTAGATGCGCTCAGAACTGGAACGATATCGGCTAATAAGGCCAGTAAAGCTTATGGCATTCCCAGCAGTACCTTGTACAAGATCGCCCGTCGGGAGGGCATCCGCCTGGCAGCGCCGTTCAACGCAGCGCCGACCACGTGGTCGCAGGAGGACCTGGAGCGCGCCCTGGAGGCCATCCGCTCCGGCCAGACCTCGGTGCAGAGAGCGTCCACGGAGTTCGGCATTCCCACGGGAACCCTGTACGGCAGGTGCAAGCGGGAGGGCATCGAGCTGTCCAGGTCCAACCCGACGCCCTGGAGCGAGGATGCTATGGGGGAGGCGCTTGAAGCAGTCAGAGTGGGCCAAATGTCAATAAACCAAGCAGCAATCCACTACAACCTCCCATACTCTTCCCTGTACGGGCGATTCAAGCGCGGGAAATACGACACGGAGCACAGCGATCACTCTGACGGGCCTGGAGATCCCGTCATCCAGTACCATGCCGGCCAAGCGCAATACCAGCATCAAAACAGTTGA
- Protein Sequence
- MNKAETATSKHAKFVTKTFSVLILNSRAPNSLTPPSELRSSSSLSSSVSSRACPLLRCFEHAASLLGSAPTAFVLGQSLSARRPANCRQGHAQVAAEPEPLAQPDLQQTVPSLAAGPAEITWEAEAAAEAVQQAGLQAQRLALRYTQPAKVKGINTRLGSRALPAMLHTRVEEMRSLLKTADQLKIKGLCEVSEDKENKAAPGGGRESPSLHRTPPKFRRLLNKRPRSSEGIRKPFKKEYAERIESLSVDDPADEDNDMPVIVESRGKHNGQNMTGHGLLPTNALFPQLCVDNEEFPPEPPGPAATPVRHVELHECSPPRTLLTNTESSQRGELIETSLGDEPPVKIKLETLRSLDQSDTIDIDSHMSSHSMGSHSEEEQGMHTMMITPELMGLIPTSSSHSELSNEGILKSNGHSTSDSHRHTGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEDNLNSALDALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSQEDLERALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDTEHSDHSDGPGDPVIQYHAGQAQYQHQNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -