Basic Information

Insect: Agonopterix heracliana
Gene Symbol: -
Assembly: GCA_963693445.1
Location: OY856317.1:18099336-18106784[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.34 23 6.4 4.3 2 23 31 52 30 52 0.96

2 15 0.00034 0.024 15.8 1.0 1 23 88 111 88 111 0.95

3 15 0.016 1.1 10.5 2.5 2 23 114 137 113 137 0.94

4 15 2.4 1.6e+02 3.7 0.9 1 23 146 168 146 168 0.93

5 15 5.1 3.5e+02 2.7 0.1 1 10 173 182 173 194 0.68

6 15 0.078 5.3 8.4 0.3 2 19 226 243 225 245 0.93

7 15 0.93 64 5.0 2.3 1 19 255 273 255 277 0.90

8 15 5.1e-05 0.0035 18.4 0.3 1 23 283 306 283 306 0.92

9 15 0.012 0.8 11.0 0.4 1 23 315 338 315 338 0.95

10 15 0.00032 0.022 15.9 0.2 2 23 344 367 343 367 0.95

11 15 2.3 1.6e+02 3.8 2.5 3 23 375 395 375 395 0.96

12 15 0.013 0.88 10.8 0.2 1 20 400 419 400 422 0.95

13 15 0.004 0.27 12.4 1.1 1 23 428 450 428 450 0.97

14 15 1.1e-05 0.00074 20.5 1.1 1 23 456 478 456 478 0.97

15 15 0.00067 0.046 14.9 0.2 1 23 484 507 484 507 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.34	23	6.4	4.3	2	23	31	52	30	52	0.96
2	15	0.00034	0.024	15.8	1.0	1	23	88	111	88	111	0.95
3	15	0.016	1.1	10.5	2.5	2	23	114	137	113	137	0.94
4	15	2.4	1.6e+02	3.7	0.9	1	23	146	168	146	168	0.93
5	15	5.1	3.5e+02	2.7	0.1	1	10	173	182	173	194	0.68
6	15	0.078	5.3	8.4	0.3	2	19	226	243	225	245	0.93
7	15	0.93	64	5.0	2.3	1	19	255	273	255	277	0.90
8	15	5.1e-05	0.0035	18.4	0.3	1	23	283	306	283	306	0.92
9	15	0.012	0.8	11.0	0.4	1	23	315	338	315	338	0.95
10	15	0.00032	0.022	15.9	0.2	2	23	344	367	343	367	0.95
11	15	2.3	1.6e+02	3.8	2.5	3	23	375	395	375	395	0.96
12	15	0.013	0.88	10.8	0.2	1	20	400	419	400	422	0.95
13	15	0.004	0.27	12.4	1.1	1	23	428	450	428	450	0.97
14	15	1.1e-05	0.00074	20.5	1.1	1	23	456	478	456	478	0.97
15	15	0.00067	0.046	14.9	0.2	1	23	484	507	484	507	0.98

Sequence Information

Coding Sequence: ATGGCTTCACCTACCCCTCAGACTACCGCGGGCGGTCCAAGCCTGTACAAGGCTACAAAACTAACCACAATTGACTTAATCGGGGGTATCCACTGTCACATCTGCCGGCAGACGTATGGGAACAAGAAGGAGTATGATACACATTACAGTAGCCACAACACGGGTGCGGACATTGTGTACACGTGCTTGACGTGTCGTAAAGAGATTGCCAGCTACCCGAGCTTCAGAGACCATTGCTACCTACATGTCACTAAAGACAAGTTCAAatgCAAGCAATGTTCCAAATCATTTTCCAAGCTGTCCATCCTTAAGGAGCACATTAATGCAGTACATACAATTAAATGTAAGAAGCCATCTTGCAACAAGAAattccAAACTCAACAAGAACTCCATATGCACCAGATTATCCACAAGAACGACGGTAACAGTCCTCCATACCAGTGCCAAACCTGCGAACAATCTATTGAGAGCCTGGACACCTGCGAGATCCACATCGACAAACATTGCAAACTTAAGTACTCTTGCCCTATTTGCAATGTTGACATAACAAAACCCGATGCCATCATACACTTAACTAAACATTTTGGTGATGAAGATATCCCACAAATTGATCACGAATCGCTGAATATCAACGATATATCAGAGAGCAACGCAGTTAATGACATCGGAGGCATTTACTGCGTCTTCTGCGATAAACAGTATAAGAATAGAAGTGAATTCGACGCTCATTTCCCGGTAGACCATGAtggtaaaaatattgtttatgccTGCAATATCTGTGAGAAGCGATATGAAGAATATTCTCTGCTTGGATCCCATTGCCATGATCATGTTGTTAAAAATAGATTTCAATGTGATTTATGTGACCGCACCTTCCCTCGCCTGTCGCTCCTGGTGAACCACACGGAGGCCTACCACACCGCCAACTCCGACGACAAGCCGTTCAAGTGCGTCGAATGTGACCACGCTTTCAAGGGGGAGTGGAGACTTCGCGAACACTTGTTGCAGGCCCACGGGTTGCAGAGTCTGAAGTGCAACGAGCCAGGCTGCAGTGAAGAATTCAACACCCCCAAAGAGCTGATCCGTCATCAGAACCAACACAAGAGCCTGGGAGACAACTGGTGTCGCCAATGCGGCTTGCAGTTCAAATCTCTCGTATCTTGCTTCAAACACCTCGAAGTTCACAAGAAAAAACGATTCACTTGCCCCGTATGCAGCAGAGActacggagaaaaatatcttctAATGAAACACATACCACAACATTTCGAATCCGTATTCCACATGTGCAAAGTCTGCGGCAAAATCTACAACGCAAAGAACCGCCTCGTAGAACACGTTAAAACCCACTCCACCGTAAAAAACTACGAATGCAAAATTTGTGGCaaaggcttcgtcaaaaccaaCCATTTGCAGCAGCACCTGATCTTGCATAGCGGCTCTAAGCCCTACAAATGCGTGGCTTGCCCTAAAGAATTCGCCACATACCCAAATTGGAGCAAACATTTGCGTAAAGTTCACAAAATTGATGCGAAAACGATTAAAAAACCGACAGCTGTCGTAAATACAGCTTCAGAAACGAATGGTACAAAGTTAATTAGTGAAACTAAAGTACAAGAGGTCTTGACGACTGGCCAACTCTACGATTTTGTTGAGAGCGACCAAAGTACGATGGACTCCGATAGTATTGATTCGGTTGTTATTGAGAAAGATTCTGCCATTTTCGATTCTAATATTGCTTCCATTGCTGATGATCCTATAGAAGAAACCAGCGAGCTGCCAGAAAATATTGCTGTATTTGTCACagAAGCTTCTCTGCTAAGTCCTCTGCCGCCGCAGCCCGAGCGCATCCCCTTCGAGTACGGGCCGGACTTCGTCAACGCGGGCGCCCTGGCCCCCTGCGGTGAGTTCATCGACCTCGACGACCACCTGCTCCCCCACATCGACCCCCACCTCACCCTCAACAACAGGCCCGACGACCCCCCATACAAACACAACTATCAGTTCCCAGACTACGACCAAAACATGCAGTCTATCGATAACGACAAGTGGGAACCCGTCATTACTAAGATATATTCGACGTTTTACGGTAATATAGATGAAATGAACGGCAGCATGATGCACGTCATGAACTCagatatattttga
Protein Sequence: MASPTPQTTAGGPSLYKATKLTTIDLIGGIHCHICRQTYGNKKEYDTHYSSHNTGADIVYTCLTCRKEIASYPSFRDHCYLHVTKDKFKCKQCSKSFSKLSILKEHINAVHTIKCKKPSCNKKFQTQQELHMHQIIHKNDGNSPPYQCQTCEQSIESLDTCEIHIDKHCKLKYSCPICNVDITKPDAIIHLTKHFGDEDIPQIDHESLNINDISESNAVNDIGGIYCVFCDKQYKNRSEFDAHFPVDHDGKNIVYACNICEKRYEEYSLLGSHCHDHVVKNRFQCDLCDRTFPRLSLLVNHTEAYHTANSDDKPFKCVECDHAFKGEWRLREHLLQAHGLQSLKCNEPGCSEEFNTPKELIRHQNQHKSLGDNWCRQCGLQFKSLVSCFKHLEVHKKKRFTCPVCSRDYGEKYLLMKHIPQHFESVFHMCKVCGKIYNAKNRLVEHVKTHSTVKNYECKICGKGFVKTNHLQQHLILHSGSKPYKCVACPKEFATYPNWSKHLRKVHKIDAKTIKKPTAVVNTASETNGTKLISETKVQEVLTTGQLYDFVESDQSTMDSDSIDSVVIEKDSAIFDSNIASIADDPIEETSELPENIAVFVTEASLLSPLPPQPERIPFEYGPDFVNAGALAPCGEFIDLDDHLLPHIDPHLTLNNRPDDPPYKHNYQFPDYDQNMQSIDNDKWEPVITKIYSTFYGNIDEMNGSMMHVMNSDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00027185;
90% Identity: iTF_00027185;
80% Identity: -