Basic Information

Insect: Agonopterix heracliana
Gene Symbol: -
Assembly: GCA_963693445.1
Location: OY856336.1:464273-465790[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0011 0.076 14.2 2.4 1 23 153 176 153 176 0.95

2 10 0.00014 0.0095 17.0 2.7 3 23 185 206 183 206 0.94

3 10 0.13 9.2 7.6 3.3 2 23 214 236 213 236 0.95

4 10 2.3e-05 0.0016 19.5 2.0 2 23 244 266 243 266 0.95

5 10 0.0093 0.64 11.3 6.3 1 23 273 296 273 296 0.93

6 10 0.0085 0.58 11.4 6.3 1 23 302 325 302 325 0.94

7 10 6.4e-05 0.0044 18.1 0.3 2 23 333 354 332 354 0.97

8 10 0.012 0.84 10.9 1.9 2 23 362 384 361 384 0.96

9 10 0.00012 0.008 17.3 3.0 2 23 391 413 390 413 0.94

10 10 2e-05 0.0014 19.7 3.2 1 23 423 445 423 445 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0011	0.076	14.2	2.4	1	23	153	176	153	176	0.95
2	10	0.00014	0.0095	17.0	2.7	3	23	185	206	183	206	0.94
3	10	0.13	9.2	7.6	3.3	2	23	214	236	213	236	0.95
4	10	2.3e-05	0.0016	19.5	2.0	2	23	244	266	243	266	0.95
5	10	0.0093	0.64	11.3	6.3	1	23	273	296	273	296	0.93
6	10	0.0085	0.58	11.4	6.3	1	23	302	325	302	325	0.94
7	10	6.4e-05	0.0044	18.1	0.3	2	23	333	354	332	354	0.97
8	10	0.012	0.84	10.9	1.9	2	23	362	384	361	384	0.96
9	10	0.00012	0.008	17.3	3.0	2	23	391	413	390	413	0.94
10	10	2e-05	0.0014	19.7	3.2	1	23	423	445	423	445	0.98

Sequence Information

Coding Sequence: ATGATGGATCAACAAGAACCGCTACATCTAGGCCATCCAAAAATGGAGCCCCCGTATTACGTGCCGCCCAAACCTGAACCGTTACACCTGGGCCCGAAACCGGACTACTACATGGGACCAGTAAATCCTCCGTTCCTCGGCCTACCAAAGCCCGAAGCTTACCTCAACATGCCAAAATCAGAATCATACCATCTGCCTCTGAACGTACCATTACAACTCGAGCCACCGAAGCCAGAACCACAGTTAGAGCAGCCTCAATTGGAAACAAAGCCAGAAAATCCACCAGACACATCTACGGATCAAAAAAATCCTTCTACGACCCAAGAGAAGCCTAAGGACATGAAATTCATAAGTGTCACAAGCGATATATTAACCAACGAGCAACGAGAGATGTACAAATCTGTACTCGCAACGTGGAAACCCCAATTAATGCCAAATTACAAAAGTCAAAGACGTTTCATCTGTCAGAAATGCAGCAAAGAATTTAAGAATTATCAAAATCTTTACCTACACACAACCAGAGTTCATTCTTCAGAAGAATCGGCTGTCATTTGCGATCTTTGCGATAAAAGCTTCAAAAATAAACACTACTTATACATGCATCGTATGAACAAACATTATTCCGAAATGGAGAAATGTTATTGCCAATTCTGTTTGCAAGAATTTCGTACGCGACGAGCTCTATACATGCACGTAAAACGCATCCACCCAACTACGCTCCCCGAATTAAAATGCAAAGATTGCGGCAAAGAATTCCGTGTGCCGTACAAACTGAAATACCACATCGAATCCTGCCATCGTACAGacaaagaaaaatacaaatgcCAAATATGTCAGAAGTTATACAAGAATCATTTGAACTTAAACCGTCATTTACATTTCCAGCACTCGCAGATCGAACGTCACACTTGCGTGTTCTGTCCCATGACATTCAAGTCACGTCACCACATGAAACGTCACGTGCTAAACATCCACCCACCGTTAGAATCTAAAGTACAATGCCCGGAATGTCTCAAAGAATTCAAGAACGATCAATATTTAAAAGAGCACATGCAAGTTCATTCGTCGTTGGACACGAAACTGAAGTGCGATCTCTGCGATAAACTTTTCCACTCGGCTATACGTCTGAAAAAGCACAAAAAGATCGTTCACCCGTCAAAACCAAAGATACGATGCGAGAAGTGCGATAAAGAATTCGCTCATGCACACTACCTACGTCGTCACAATAACTCTGTGCACGTAGAAGTCGATGAAACAAACTATGAGCACGAATGTAATCAATGCGGGAAGAAATTTAAGCTACCGAGGTATTTGAATAATCATCTGCAGCGGCACGAACAGCAGCATTTGAAGCGGATATCGCAGATGGTGAAGACGGTTATGGATGACGATGATAAGCCGTTGAAGAAACGAGGGAGGCCAAAGAAGGAACGGAAGGAGATTGAGTTTATTAAGTGCGAACCCGTGTCGAGTTCCGAAGATTCCGATTCTGGGGAAACGGAATCCGATTCAGAGTAG
Protein Sequence: MMDQQEPLHLGHPKMEPPYYVPPKPEPLHLGPKPDYYMGPVNPPFLGLPKPEAYLNMPKSESYHLPLNVPLQLEPPKPEPQLEQPQLETKPENPPDTSTDQKNPSTTQEKPKDMKFISVTSDILTNEQREMYKSVLATWKPQLMPNYKSQRRFICQKCSKEFKNYQNLYLHTTRVHSSEESAVICDLCDKSFKNKHYLYMHRMNKHYSEMEKCYCQFCLQEFRTRRALYMHVKRIHPTTLPELKCKDCGKEFRVPYKLKYHIESCHRTDKEKYKCQICQKLYKNHLNLNRHLHFQHSQIERHTCVFCPMTFKSRHHMKRHVLNIHPPLESKVQCPECLKEFKNDQYLKEHMQVHSSLDTKLKCDLCDKLFHSAIRLKKHKKIVHPSKPKIRCEKCDKEFAHAHYLRRHNNSVHVEVDETNYEHECNQCGKKFKLPRYLNNHLQRHEQQHLKRISQMVKTVMDDDDKPLKKRGRPKKERKEIEFIKCEPVSSSEDSDSGETESDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01265142;
90% Identity: iTF_00027166;
80% Identity: -