Basic Information

Insect: Agonopterix heracliana
Gene Symbol: -
Assembly: GCA_963693445.1
Location: OY856320.1:3516118-3525028[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 2.8 1.9e+02 3.5 0.1 3 23 125 145 123 145 0.95

2 19 5.3 3.6e+02 2.6 0.1 3 23 150 171 148 171 0.88

3 19 3.7 2.6e+02 3.1 4.3 3 23 176 197 174 197 0.91

4 19 0.11 7.3 7.9 0.3 1 20 430 449 430 451 0.94

5 19 0.27 19 6.7 0.7 2 23 461 482 460 482 0.93

6 19 1.2 81 4.7 0.7 1 23 498 521 498 521 0.86

7 19 0.18 12 7.3 1.4 1 23 530 553 530 553 0.92

8 19 6.6 4.5e+02 2.3 1.8 5 23 599 619 594 619 0.83

9 19 0.022 1.5 10.1 0.3 2 23 630 652 629 652 0.92

10 19 1.5 1e+02 4.3 2.1 1 23 657 680 657 680 0.92

11 19 4.8e-05 0.0033 18.5 1.8 1 23 686 708 686 708 0.97

12 19 7.1e-06 0.00049 21.1 1.8 1 23 715 737 715 737 0.98

13 19 0.00011 0.0078 17.3 2.3 1 23 742 764 742 764 0.96

14 19 0.00065 0.045 14.9 3.6 1 23 770 792 770 792 0.98

15 19 3.1e-06 0.00022 22.2 1.5 1 23 798 820 798 820 0.97

16 19 0.00028 0.019 16.1 3.5 2 23 827 848 827 848 0.98

17 19 0.00048 0.033 15.3 0.5 2 23 857 879 856 879 0.97

18 19 0.008 0.55 11.5 0.7 1 23 884 906 884 906 0.97

19 19 0.00091 0.062 14.5 1.7 1 23 912 935 912 935 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	2.8	1.9e+02	3.5	0.1	3	23	125	145	123	145	0.95
2	19	5.3	3.6e+02	2.6	0.1	3	23	150	171	148	171	0.88
3	19	3.7	2.6e+02	3.1	4.3	3	23	176	197	174	197	0.91
4	19	0.11	7.3	7.9	0.3	1	20	430	449	430	451	0.94
5	19	0.27	19	6.7	0.7	2	23	461	482	460	482	0.93
6	19	1.2	81	4.7	0.7	1	23	498	521	498	521	0.86
7	19	0.18	12	7.3	1.4	1	23	530	553	530	553	0.92
8	19	6.6	4.5e+02	2.3	1.8	5	23	599	619	594	619	0.83
9	19	0.022	1.5	10.1	0.3	2	23	630	652	629	652	0.92
10	19	1.5	1e+02	4.3	2.1	1	23	657	680	657	680	0.92
11	19	4.8e-05	0.0033	18.5	1.8	1	23	686	708	686	708	0.97
12	19	7.1e-06	0.00049	21.1	1.8	1	23	715	737	715	737	0.98
13	19	0.00011	0.0078	17.3	2.3	1	23	742	764	742	764	0.96
14	19	0.00065	0.045	14.9	3.6	1	23	770	792	770	792	0.98
15	19	3.1e-06	0.00022	22.2	1.5	1	23	798	820	798	820	0.97
16	19	0.00028	0.019	16.1	3.5	2	23	827	848	827	848	0.98
17	19	0.00048	0.033	15.3	0.5	2	23	857	879	856	879	0.97
18	19	0.008	0.55	11.5	0.7	1	23	884	906	884	906	0.97
19	19	0.00091	0.062	14.5	1.7	1	23	912	935	912	935	0.98

Sequence Information

Coding Sequence: ATGTCTTCAGAAGAATCAGACGATGAACCACTAGCCGCCTTAGCAGCAGCAAAGAAGCTTAATCCCGAGAAACAGCCCGAATTAATTGTGCCCGACAGTGAATTTACTTACGAGCCCAAAAAGAAGAGAAAAAGAgtgaaaactaaaaaaactcAAGAGTCACCATTTAAGAAGTTGCCGGTCACGTTTAAATTGAACCGTAAGTTGAAGGATAAGCTATCTCCTCCTGTGGTAGAGAGGCCGACAGACGTGTGGTTGTATTTGAAAGATTTTAACCCAACCGGGCCCTACAGCTGTTTATTGTGCTCTGAATGGTTCATAAGCAAAGCTAAGATAATAATACACTACGTTTTGAATCATAAGAAGGACTTTTGTGGAATATGCAGATACTTTATAGTAGacagagaaacatgggcagcaCACCAAAAGTTCCACACTCCCTGGCCGTGCTCCCAATGTATAGGAAACTTTCCGACTGAAGCAGATCTTCGTGAACACCTCAGCAACACCCACAACCTTGTCCACTGCCGACTCTGCCACTTCCGTGTATCTGATAACGATCAGTATAACACCCATTTATTTCAAAAGCACAGCGTTACAAATGTGTCAAGCAAAGACGAGGAGGTTTTATGGGAATTAGAGTACGAAGATTGTCAAAAATTTGTATGCCTTCTATGTTCACGGTCAAATAATGTAGCATCATCATTCTTCAATCACTACATGGGCTACCATCATTTGACACTCAAATGTTTCACGAATATAATTTCTGGTAAAGACGTGCCATTTCTGTTGTATGGTGCTGATGTCAGCACAGAATTCGTTGAGAGTTTAAAAGACCATGCGAAGTATGGATATGTTGATTTAGATCAGAAAACCATTGTACAAAATGCTGATAAGAGACTAAACGACAGTGATGACTTTTTAAACATTCTAATGCCAGAAATAAAGCAAGAGATGTTAAGTGACAATGAAGATGTAACAGTTGATAATGACCAAAGCAAAGATGTTCAAATTGATCTCATAAAATCGTATAAAGGAGATGAAGATTTTGATGTAACATTAATGGAGCTAATAATCCTTCAAAAATGTTATTATGACTACCTAACTTCTACGTTAAATGATATTAATTCAAACATAGTGCCCAAAAACTCGGATATTGACTATGAAAAGGTCAAATCTGATGTTTTGATTGATATTGAATGTTCCTTATGTAAAACTAAGCATCATACGGTCCAGACCTTTACAACACACATGTATAAAATGCACAGCGTAAAGTCTGTACCAGTTTTTTCTTGCCGAGTATGTGCGACAACATTTGACAGTCAACATGAATTGGACAGTCATGTTTCGGAAGAGCTCGGTGACTTCGAAGATCTATGGATTTGTCagttttgtgaaaaagaattcgATAATAGGGAAACTTCGCGACGACATTTGACTGAACATTGGGATATAATAGAGTATGACAATTGTTTTAGTCCACATTTGGGTTTTAAATGTAAATACTGTCCTACGCTGTTCTGGAATGAGACGGATAGGGAGAATCATCAAGTTCGAGTACATTTTAATAAGTACAAAGAGcagtattataaatgtgaacTGTGCTCTGAtgtttttagtgataagATTTGGTTCATCCACCACTTCTTAGAAAAACATGAAGAGGAAGCTTCCAAAGATTTGTACCTATTAAAATGTTGTCTCTGCTGTATTGTATTGCCGAGTGTGGAAGAAATGAGGACGCACTTCGGACGGGAACACCCTGAGGCCAGGAAAGTGTTCTGTTCCTTGGATGGATGTCAGTATAAACCTTTAAGTCATAAGAAGTCTTTTCAATTACATTTGAGGTCTCAACACACATCGCAAATAAGAAAGGACCGGGCAGTGACGTGCACAATATGCGGTCGTGAGTTTCCCAGTTCGCGCGCGTGCAGTGCCCACATGGCTCAGGTTCATGGTCCCGGAAAGTACAAGTGTAAGATATGTAAGGAGATGCTACATTCTATGGATGAGAGAAAACTGCACTACCTGATCCGTCATCCCGGACACCACCCGTTCGAGTGCTCTGAATGCGGCAAGTCGTTCCAGTACAAGTCCTCTCTCTACATGCACAAGCAGGAGCACTCGCCCAACAAGCAGAGCTACACCTGCAACTACTGCCAGAAGGTCTTTGTGAAAAAGGACTCATTCCGCGAGCACCTCCAAATCCACGAAGGTCCCCGTCACGCGTGCTCGTACTGCCCGATGCGGTTCGTGCAGCGCTCGAACATGCTGCGGCATGAGCGGCGGCACACCGGCGAGCGACCCTACGCCTGCCCACACTGCGACCGCACCTTCTCCGACAAGGGGGCCTGCACCTCACACTCCAGGACTCACTCTAAGGAGGCTTCGTTTGCGTGTCTTTACTGCGGCCAGACGTTCGTACAAAAGTCCAAGTTAACATACCACATCAGAAAACATACCGGGGAAAACCTAGAAACGTGTACGATCTGCTCGAAACTGTTCACGAGCGCGTGCTCTTTGCGCGAGCACATGAAGACTCACGAGAAAGTTAAGAAGGAGGCCGTCAAATGCCCTCTATGTGACAGGACGTACCAGGACGAGCGGTACATGCTGCGCCACCTGCGCACCATGCACACGCGCGAGCAGTTCTCGTGCCCGCTGTGCCGCAAGCTCCTGTCCACCTCCGCCGGGCTGAGGCACCACGTCGTGACACACAGCCACATGAACATATTCAGGTGCAAATTTTGCCCAAAATCCTACGCAGTAAGACGCACAATAATAAAACACATCCGCCGCCGCCACAGCCAGAAAGGCGTCCAGATGACCTTAAAAGATTTTTACCACAAATTGGACCCCAGAGAATGCCAATTAGGTCTCGACGAAGAAGTTATGACCAGCATTTTTGGTCCACCGAAGAGAACTGTGAACGATATTCTGATCGGTGATTTTGTGACGTTTACAAAGAGAATGCAAATTGCTACTACTGCCGCTACGTCAAATGTTGATAACAATGACGATAGTGGCGATGATGACGGGGATCAGTCTAAAGAGAGTGATAATGACAGTGAAGGGAATGACAAGCAGACCAGCAAGGATGAAGAACATAGTAGTGAAGAAGAGCTGGAACCGACAGATTTTGTTAGCGTCAAAATTGAACCTATTGATGAGAATGAGGATGGTACGGATTAA
Protein Sequence: MSSEESDDEPLAALAAAKKLNPEKQPELIVPDSEFTYEPKKKRKRVKTKKTQESPFKKLPVTFKLNRKLKDKLSPPVVERPTDVWLYLKDFNPTGPYSCLLCSEWFISKAKIIIHYVLNHKKDFCGICRYFIVDRETWAAHQKFHTPWPCSQCIGNFPTEADLREHLSNTHNLVHCRLCHFRVSDNDQYNTHLFQKHSVTNVSSKDEEVLWELEYEDCQKFVCLLCSRSNNVASSFFNHYMGYHHLTLKCFTNIISGKDVPFLLYGADVSTEFVESLKDHAKYGYVDLDQKTIVQNADKRLNDSDDFLNILMPEIKQEMLSDNEDVTVDNDQSKDVQIDLIKSYKGDEDFDVTLMELIILQKCYYDYLTSTLNDINSNIVPKNSDIDYEKVKSDVLIDIECSLCKTKHHTVQTFTTHMYKMHSVKSVPVFSCRVCATTFDSQHELDSHVSEELGDFEDLWICQFCEKEFDNRETSRRHLTEHWDIIEYDNCFSPHLGFKCKYCPTLFWNETDRENHQVRVHFNKYKEQYYKCELCSDVFSDKIWFIHHFLEKHEEEASKDLYLLKCCLCCIVLPSVEEMRTHFGREHPEARKVFCSLDGCQYKPLSHKKSFQLHLRSQHTSQIRKDRAVTCTICGREFPSSRACSAHMAQVHGPGKYKCKICKEMLHSMDERKLHYLIRHPGHHPFECSECGKSFQYKSSLYMHKQEHSPNKQSYTCNYCQKVFVKKDSFREHLQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCDRTFSDKGACTSHSRTHSKEASFACLYCGQTFVQKSKLTYHIRKHTGENLETCTICSKLFTSACSLREHMKTHEKVKKEAVKCPLCDRTYQDERYMLRHLRTMHTREQFSCPLCRKLLSTSAGLRHHVVTHSHMNIFRCKFCPKSYAVRRTIIKHIRRRHSQKGVQMTLKDFYHKLDPRECQLGLDEEVMTSIFGPPKRTVNDILIGDFVTFTKRMQIATTAATSNVDNNDDSGDDDGDQSKESDNDSEGNDKQTSKDEEHSSEEELEPTDFVSVKIEPIDENEDGTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00027165;
90% Identity: iTF_00027165;
80% Identity: -