Basic Information

Insect: Agonopterix heracliana
Gene Symbol: pita
Assembly: GCA_963693445.1
Location: OY856308.1:11031280-11054991[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.74 51 5.3 0.5 3 23 212 233 210 233 0.93

2 10 0.00064 0.044 14.9 0.7 3 23 240 260 239 260 0.97

3 10 0.00091 0.063 14.5 0.4 1 23 266 289 266 289 0.95

4 10 0.0014 0.094 13.9 0.1 2 23 296 317 295 317 0.98

5 10 0.00036 0.025 15.7 0.9 1 23 325 348 325 348 0.97

6 10 3e-05 0.0021 19.1 0.3 2 23 355 376 354 376 0.97

7 10 7.7e-05 0.0053 17.8 6.9 1 23 382 405 382 405 0.96

8 10 0.0037 0.25 12.5 0.2 1 23 420 442 420 442 0.95

9 10 0.0036 0.25 12.6 0.1 2 23 448 469 447 469 0.97

10 10 0.31 21 6.5 0.4 1 17 475 491 475 498 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.74	51	5.3	0.5	3	23	212	233	210	233	0.93
2	10	0.00064	0.044	14.9	0.7	3	23	240	260	239	260	0.97
3	10	0.00091	0.063	14.5	0.4	1	23	266	289	266	289	0.95
4	10	0.0014	0.094	13.9	0.1	2	23	296	317	295	317	0.98
5	10	0.00036	0.025	15.7	0.9	1	23	325	348	325	348	0.97
6	10	3e-05	0.0021	19.1	0.3	2	23	355	376	354	376	0.97
7	10	7.7e-05	0.0053	17.8	6.9	1	23	382	405	382	405	0.96
8	10	0.0037	0.25	12.5	0.2	1	23	420	442	420	442	0.95
9	10	0.0036	0.25	12.6	0.1	2	23	448	469	447	469	0.97
10	10	0.31	21	6.5	0.4	1	17	475	491	475	498	0.84

Sequence Information

Coding Sequence: ATGGAGAAAAGGAGAGAAAAATTAAACACTAAAAAACAGTGCCGGTTTTGTTTGTCGGACGATGAATCAATTCGAAGTTTATATGACCGAAACCGAGCATCAAATACAGTTCCACTTTCCCTGAAAATCATGTCTTGTATATCAGTAGAGGTATTTCCATCGGACAAGATGCCACAGTACATATGTGACCGCTGCAGATATTTCATGGACATCAGCTATGAATTCAAGCAGATCTGCAGACAAGCTGACGAGACGATCCTACAGTTTGTTCAGACCGGCACACCGTTGGAGCCTGTTACTTGGCCACCTGCACTCGctaagTTTTTTCACTACGGATCTAAATCATCCCGGGACGTTGGCATCAAGACAGTAGTAGAAGGCGGTGCTACTGTTGAAGTGACGTCTCAGGACAATTCAGACAGTGACGATGATGAAGAGAATGTTTACAGCGTCAAGATAGAAGAAGGATCAGATGATGGAGGGTCATCCGCATGTATCAAAGTAGTGACCAGCAAAGATAGCCATGAACTCACCAAAGAGAAACCTATAAAGGGTGAAAAAGATTCGGAGAGGAAGTTGGGTAAGATGTCGAAGCGGCGTGGATCGGGCGGCATAGCGGACGGCTGCTGGGCTTGCGATGAGTGCGAGTGCACTTACCCGCTGCAGCAGCTCCTGGAGCTCCACAAGATGCAGAAACACAGGACCAGGACGGTGGCCTGCGATATGTGTGACGCTAAATTTTTCTCCAAGTCTGATCTGTCTACGCATCAGTTGCGACACTCTGACGATATGCCCTTCGAATGTGTTGCTTGTGACCGCAGATTTAAGCGGCTCGTTTTGCTGAAACGCCACGAACTGAGGATACATGCTGATTTGCCTCAGCAGAAATGCCCTGACTGTCCAGCATCTTTCTTGTCCCTGGAAGAGTTGGAAGCTCATCAGAAAAAGCACGTAATTCGCGGGGAACCACAATACTCGTGTCgcatttgtaaaaaaaaGTTCTACGAGAAAGCACCTCTTCAAAGACACCTCGACACCGTGCATTCAGATAAGCCGCAGTTATCCTGCGAATACTGCCCTGAGCGCTTCTCATCGGTGTCTAAGTTGGCGAGACATGTGCGCTCCCACGCCGGCGAGAGGGCTTACCCGTGCAAATATTGTGACAAGAGTTTCATTAAATCACATCATTATACCAGACACCTCAAGCTAAAACACATTGAGTCGATGCGTGCAGCCACATTCGGCATGCCGGACCAATACCGTTGCGAGCAATGTGAAGACAGCTTCAGTACACAAGACGAGCTCATCTACCACTCGGCCATCCACGCCACACAAAACCTCACCTGTCCCCTCTGCCAGGAGAAGTTTGAGAACGTTGACGCCGTCACTTCCCATATCAAGTCGCATGTTAATGGCACGGAGTTCATGTGTGACCTCTGCGAGCTGGTGTTCACCTCGAAGGAGAAGCTGGACTGCCATGTTGTGATCGCACACGACGACGAACTGCGACAAGTACAGGACGAGTCTTCAATGGATACGGAATGGAAAGGCGACGAAGATGACGATACCATGAACGTTAGAGAAGAAGATGACCAGATGGTGGTAGAAATAAAGAAAGCTGAAGATTTTATGCTCACAAGCAGGCAAGAAGAAGCCGAGGCATACGCTGAAGACAAAATTGACAATACTAATTCTGAAGAGAGCGAAGTAGAAGCGACATACACTGAGTTATCGACGGTCGATACTCTTAACATAGTGAAGAAAGAGCCGGTCGTTTCGTCTATCAAAACGACCGTAGCGGCGACGTATACGTCGACGGTTATCAAACCACCGGCGCCTGCGCTGACGACGCTTGCTACAATCACGCCTAAACCTGCTGCTAAGGTCGAAAAAAGCATATGTAATCAGACTGCAGGCATATTGCGGAGAGCAGAAGAAATTAAACGTAAAACTATTCAAACACCTCCAGCAGAAATTACTATTGCAGATAAAAAGGAGAAGGTTAATAAAGTGGAGACGAGCAACAGCGTCGGCGCCAGTGACAAGTCTCTACGTTTGCTAGAAAAGGAACTACAAGAACTTAAAAGGACAACCCGCAATGAGGTTCCTAAAACGCCGGCAAAGCCAGTGGAATCTTTACGGAGTAACAGAAGACCGCAGCTTCATACATCCACCCCCAAGTTGAGAGCTACAGAAGAAAAGAAATCTCTAGCTTCGACAAAATCGCCAGCTCTAGAAAAGAAACAGCCGGAACGTCGTGCGGTGAAAGAGAACAAGGAACCGAAGGAGGGCAAGAGCAACAACACGAGCGTGAAGGAAGACAAGGAAACCAAAGTCACCACTAACTCTAAGGAAGAAAAGGAGAAAGAAATCAAGGAGCGAGATACACCAAAGACTATCGTGAAGAATGGCGGTAACGACAAAAGCGTGACGGACGATTCAGTGCGCCGATCCACACGTCCCTCCAAAATCAAGGACTACGCGAAAATGATACGTGATAGATCCCAAATGTCAGATGACGACACAGATGACGGCGACGATGAGGAATACGTTGATTCCGAGAAAAATCCTGAAaTTCGTTCAAGAGCGCGACGTGCAAGTGTTGTGAAACCGACGCCTCCTAAAACCGTCGTCAAGCCCACACCGACGAGGAAGCGGGGGCGGCCGCGCAAGGAACAATCTATAGATGTGCCAGCTAAAGTGAAGAAAGATGAAATTGAAGATGAAGAAGCTAAATCTGAAAAGATGGAAGCAGAAGAAAGCAGTAGCAAAGGGAAGGAAAAGCCAGCTGCCGACGAAACAGATGAGAGTGTTACTGCCGACGAGAGCAGCAACATGGATATCAGCAAGCCAGCTACAGCTGACCCAGTCCAACCTAGTATAATGGTTTCGCCGACTGGACAAACGCTTAAAAAAGTACCAATCAAAAATCTACCACCCGGTGTTAAACCACTTCCTTTGCCTCGCCCTATAAGCGGACCAGGAGAACTGTGCGAAATGCAAATAGGAAAGAAGGTGGTCAAAGTACAGAAAATTGTTATGACTAAGGCGGAGGTAGAAGCCATGGCCAAGAAGGGATTAGTTGAAATGAAgGATGGCACGATGGTGTTGAAGCAAGGAATAAAAATACCGAAATCAGATCCAGTCGCTATCAAGTCTACTCTAGTCGGGGAAGcGGAAGGTGTAAAAGAATCTCCTACCAAGAAAGATAAAGGAGCGCCGTCGCGGTGCGACTTAGGTGAAGATGCGTAA
Protein Sequence: MEKRREKLNTKKQCRFCLSDDESIRSLYDRNRASNTVPLSLKIMSCISVEVFPSDKMPQYICDRCRYFMDISYEFKQICRQADETILQFVQTGTPLEPVTWPPALAKFFHYGSKSSRDVGIKTVVEGGATVEVTSQDNSDSDDDEENVYSVKIEEGSDDGGSSACIKVVTSKDSHELTKEKPIKGEKDSERKLGKMSKRRGSGGIADGCWACDECECTYPLQQLLELHKMQKHRTRTVACDMCDAKFFSKSDLSTHQLRHSDDMPFECVACDRRFKRLVLLKRHELRIHADLPQQKCPDCPASFLSLEELEAHQKKHVIRGEPQYSCRICKKKFYEKAPLQRHLDTVHSDKPQLSCEYCPERFSSVSKLARHVRSHAGERAYPCKYCDKSFIKSHHYTRHLKLKHIESMRAATFGMPDQYRCEQCEDSFSTQDELIYHSAIHATQNLTCPLCQEKFENVDAVTSHIKSHVNGTEFMCDLCELVFTSKEKLDCHVVIAHDDELRQVQDESSMDTEWKGDEDDDTMNVREEDDQMVVEIKKAEDFMLTSRQEEAEAYAEDKIDNTNSEESEVEATYTELSTVDTLNIVKKEPVVSSIKTTVAATYTSTVIKPPAPALTTLATITPKPAAKVEKSICNQTAGILRRAEEIKRKTIQTPPAEITIADKKEKVNKVETSNSVGASDKSLRLLEKELQELKRTTRNEVPKTPAKPVESLRSNRRPQLHTSTPKLRATEEKKSLASTKSPALEKKQPERRAVKENKEPKEGKSNNTSVKEDKETKVTTNSKEEKEKEIKERDTPKTIVKNGGNDKSVTDDSVRRSTRPSKIKDYAKMIRDRSQMSDDDTDDGDDEEYVDSEKNPEIRSRARRASVVKPTPPKTVVKPTPTRKRGRPRKEQSIDVPAKVKKDEIEDEEAKSEKMEAEESSSKGKEKPAADETDESVTADESSNMDISKPATADPVQPSIMVSPTGQTLKKVPIKNLPPGVKPLPLPRPISGPGELCEMQIGKKVVKVQKIVMTKAEVEAMAKKGLVEMKDGTMVLKQGIKIPKSDPVAIKSTLVGEAEGVKESPTKKDKGAPSRCDLGEDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00027135;
90% Identity: iTF_00027135;
80% Identity: -