Basic Information

Insect: Agonopterix heracliana
Gene Symbol: -
Assembly: GCA_963693445.1
Location: OY856333.1:5069624-5079395[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6.6 4.5e+02 2.3 0.2 1 23 30 53 30 53 0.90

2 17 0.15 10 7.5 0.4 2 23 57 79 56 79 0.92

3 17 5.2 3.6e+02 2.6 8.7 2 23 95 117 94 117 0.93

4 17 0.1 6.9 8.0 0.3 2 23 121 142 120 142 0.92

5 17 0.026 1.8 9.9 0.9 2 23 148 170 148 170 0.97

6 17 8.4e-05 0.0057 17.7 0.2 2 23 177 198 176 198 0.95

7 17 0.027 1.9 9.8 2.7 1 23 204 226 204 226 0.96

8 17 0.0024 0.16 13.1 0.1 2 21 233 252 232 253 0.94

9 17 0.02 1.4 10.2 0.5 2 23 337 359 336 359 0.92

10 17 0.0096 0.66 11.2 2.6 2 23 375 397 374 397 0.92

11 17 0.38 26 6.2 0.3 2 23 401 422 400 422 0.83

12 17 0.00068 0.047 14.8 1.0 2 23 428 450 428 450 0.97

13 17 7.9e-05 0.0054 17.8 0.2 2 23 457 478 456 478 0.96

14 17 8.4 5.8e+02 2.0 0.9 2 23 525 547 525 547 0.91

15 17 7.7e-05 0.0053 17.8 0.7 2 23 554 575 553 575 0.96

16 17 0.0031 0.21 12.8 3.1 2 23 582 603 581 603 0.96

17 17 3.3e-05 0.0023 19.0 0.5 2 23 610 632 609 632 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6.6	4.5e+02	2.3	0.2	1	23	30	53	30	53	0.90
2	17	0.15	10	7.5	0.4	2	23	57	79	56	79	0.92
3	17	5.2	3.6e+02	2.6	8.7	2	23	95	117	94	117	0.93
4	17	0.1	6.9	8.0	0.3	2	23	121	142	120	142	0.92
5	17	0.026	1.8	9.9	0.9	2	23	148	170	148	170	0.97
6	17	8.4e-05	0.0057	17.7	0.2	2	23	177	198	176	198	0.95
7	17	0.027	1.9	9.8	2.7	1	23	204	226	204	226	0.96
8	17	0.0024	0.16	13.1	0.1	2	21	233	252	232	253	0.94
9	17	0.02	1.4	10.2	0.5	2	23	337	359	336	359	0.92
10	17	0.0096	0.66	11.2	2.6	2	23	375	397	374	397	0.92
11	17	0.38	26	6.2	0.3	2	23	401	422	400	422	0.83
12	17	0.00068	0.047	14.8	1.0	2	23	428	450	428	450	0.97
13	17	7.9e-05	0.0054	17.8	0.2	2	23	457	478	456	478	0.96
14	17	8.4	5.8e+02	2.0	0.9	2	23	525	547	525	547	0.91
15	17	7.7e-05	0.0053	17.8	0.7	2	23	554	575	553	575	0.96
16	17	0.0031	0.21	12.8	3.1	2	23	582	603	581	603	0.96
17	17	3.3e-05	0.0023	19.0	0.5	2	23	610	632	609	632	0.96

Sequence Information

Coding Sequence: ATGGTAGTTTATATTAAGAACACATTTGACTACCCTCTCGTAGAATATCGTCAATTCGAGGTATTGGAATCCGATGATGGGAAGAAATACCTCTGTCTCACGTGCAAGCAGCTCTACGCTAACCTACGTGCGATCAAATCGCACATCGACAATGTGCACACTGAACAAACCTGTCAACTGTGTAACGAACGTTTTCCCAAGAGCATTCTAAAAAACAAACATCTTATCGAAGTACATCAAATGGAACAATATGGCTCAAAGCTTCGGCCACATACCAAATTAGAGTGCGATGTGTGTAAGAAAGAGTTCCATACAAGAAAAAGGTTAGACCACCACCATACGATATGTCATAAACTGGTCGAATGTCCTGATTGTAATGTTCCTGTGAGAAAGAAAACATTAATACGTCATCGTCACGAAGCCCACAACGTGGAAATGCCGAAATGCGGCATTTGTGGTCTCAAGTTTCTGACCCGTACTCGTTTGTCTGACCACCAGAGACGGGTACATCTTCGGGAGAAGAACGTTTCATGCCCACAATGTGACCTGAAGTTCTACAACAATGTAAGTCTACGGAGACATTTGGTGGTTCACGGAGCAGATAAAATGTATCCGTGCTCTTTCTGTCACAAAAAGTTTCCGCGTGAAACTACGAAGTGGATGCACGAGAAAATACACAAGGGAGAGAAGAATAAAGTTTGTACGATTTGCGAAGCGAAATTCGTGCAAAAAGCTAGTTTGAACTATCATATGGAATACGACGTTGTGGAATCCGGTGATATGAAGAAATTCCTCTGTCTCACGTGTAAGGAGCTCTTCGCTAGTATATGCGGGATTAAAACACACATCGCCGCCGTGCACACTGAACAAGTTTGTCAACTGTGCAACGAACGATACAACGTAGTGGAATCCGGTGATACGAAGAAATACCTCTGTCTCACGTGTAAGGAGCTCTTCGTTAGCATATGCGGAATCAAATCACACATCGCTGACATACACACAGAACAAGTTTGTCAACTGTGCAACGAACGTTTTCCCAAGAGAAGTCTTAAAAACAAACATCTAATCGAAATACATGAAATGGAAGAACACGGCTTTGAGCTGCGACCTATTAGTAAAGTAGAGTGTGATGTGTGCAAGAAAGAGTTTCATACAAGAGAAATGCTACGCCTTCACTACTTGGCATGCCATCAGCTGGTAAAATGTCCCGAGTGTAATATTCCTGTGAAAAGAAGAGCGTTAATGCGACATCGTCACGAAGCTCACAACGTGGAAATACCGAAATGCGGCATTTGTAGTTTCAAGTTTTTAACCCCTAGTCTTTTGCAAAGACATCAGAGACGGGTACACCTTCAGGAAAAGAACATTTCTTGCCCACAATGCGATAAAATGTTTTTCGATAATAGAGCTCTACAAATACATTTGGTGAAACACGAAGCGGTGAAAAGgtccgtgaaacTGTGGTATAAAGTTTACGTCGGTTACAATACCAATGATCTTGGTAGAGGTCCAGAGGGCCAGAGGACCTCAGAAGGGTATAACAGACACGAAGAACACGGCCTTTCCATCCCTACGTGCGGAGTATGTGATTATAAACATCCATATCAAACAGTCATCATCAAACATCAAAGGAAAGTACACCTTAAAGAGAAGAACATTAAATGCCCACAATGTAACTTAACATTCTTTGACAATGCATATCTGAAGAAGCATTTGGTGAAACACGAACCGGTCAAAACAATTGAATGCTCTTTTTGTCACAAGAAATTTGCCAGGCGAACTACGATGCAGATGCACGAGAAAATACACACGGGGGTGAAGAATAAAGTTTGCACGATTTGTGGCGAGAAATTTGTGCAGAAAGCTAGTCTGAGCTATCATATGAGTAAATACCATCCTGAGGCGTGCTAA
Protein Sequence: MVVYIKNTFDYPLVEYRQFEVLESDDGKKYLCLTCKQLYANLRAIKSHIDNVHTEQTCQLCNERFPKSILKNKHLIEVHQMEQYGSKLRPHTKLECDVCKKEFHTRKRLDHHHTICHKLVECPDCNVPVRKKTLIRHRHEAHNVEMPKCGICGLKFLTRTRLSDHQRRVHLREKNVSCPQCDLKFYNNVSLRRHLVVHGADKMYPCSFCHKKFPRETTKWMHEKIHKGEKNKVCTICEAKFVQKASLNYHMEYDVVESGDMKKFLCLTCKELFASICGIKTHIAAVHTEQVCQLCNERYNVVESGDTKKYLCLTCKELFVSICGIKSHIADIHTEQVCQLCNERFPKRSLKNKHLIEIHEMEEHGFELRPISKVECDVCKKEFHTREMLRLHYLACHQLVKCPECNIPVKRRALMRHRHEAHNVEIPKCGICSFKFLTPSLLQRHQRRVHLQEKNISCPQCDKMFFDNRALQIHLVKHEAVKRSVKLWYKVYVGYNTNDLGRGPEGQRTSEGYNRHEEHGLSIPTCGVCDYKHPYQTVIIKHQRKVHLKEKNIKCPQCNLTFFDNAYLKKHLVKHEPVKTIECSFCHKKFARRTTMQMHEKIHTGVKNKVCTICGEKFVQKASLSYHMSKYHPEAC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -