Basic Information

Insect: Agonopterix heracliana
Gene Symbol: -
Assembly: GCA_963693445.1
Location: OY856333.1:5005321-5008969[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0001 0.0072 17.4 0.2 1 23 57 79 57 79 0.96

2 16 0.22 15 6.9 0.3 3 23 107 128 106 128 0.97

3 16 2.5 1.7e+02 3.6 1.2 3 23 152 172 150 172 0.89

4 16 1.5e-05 0.001 20.1 0.9 1 23 176 198 176 198 0.98

5 16 0.38 26 6.2 2.2 1 19 203 221 203 226 0.85

6 16 0.014 0.95 10.7 1.4 2 23 247 269 246 269 0.95

7 16 0.56 38 5.7 0.5 1 23 344 367 344 367 0.91

8 16 0.34 23 6.4 1.0 2 23 394 416 393 416 0.93

9 16 0.087 6 8.2 1.7 2 23 439 460 438 460 0.96

10 16 0.0015 0.1 13.8 0.1 1 23 464 486 464 486 0.98

11 16 0.008 0.55 11.5 0.8 1 23 491 514 491 514 0.96

12 16 0.055 3.7 8.9 0.3 2 23 522 544 521 544 0.92

13 16 1.6e-05 0.0011 20.0 1.9 1 23 551 574 551 574 0.97

14 16 0.023 1.6 10.1 2.3 1 23 580 602 580 602 0.95

15 16 3.6e-05 0.0024 18.9 7.5 1 23 608 630 608 630 0.98

16 16 0.00019 0.013 16.6 0.7 1 23 636 659 636 659 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0001	0.0072	17.4	0.2	1	23	57	79	57	79	0.96
2	16	0.22	15	6.9	0.3	3	23	107	128	106	128	0.97
3	16	2.5	1.7e+02	3.6	1.2	3	23	152	172	150	172	0.89
4	16	1.5e-05	0.001	20.1	0.9	1	23	176	198	176	198	0.98
5	16	0.38	26	6.2	2.2	1	19	203	221	203	226	0.85
6	16	0.014	0.95	10.7	1.4	2	23	247	269	246	269	0.95
7	16	0.56	38	5.7	0.5	1	23	344	367	344	367	0.91
8	16	0.34	23	6.4	1.0	2	23	394	416	393	416	0.93
9	16	0.087	6	8.2	1.7	2	23	439	460	438	460	0.96
10	16	0.0015	0.1	13.8	0.1	1	23	464	486	464	486	0.98
11	16	0.008	0.55	11.5	0.8	1	23	491	514	491	514	0.96
12	16	0.055	3.7	8.9	0.3	2	23	522	544	521	544	0.92
13	16	1.6e-05	0.0011	20.0	1.9	1	23	551	574	551	574	0.97
14	16	0.023	1.6	10.1	2.3	1	23	580	602	580	602	0.95
15	16	3.6e-05	0.0024	18.9	7.5	1	23	608	630	608	630	0.98
16	16	0.00019	0.013	16.6	0.7	1	23	636	659	636	659	0.98

Sequence Information

Coding Sequence: ATGACGAGTGACTCTGATCCAGATTATGAACAAAAGACAGCCCCAAAATACTCGTCAACTTCACAAATATTGAAAGAGAAATTAGATGTCGACAAGCATTGTACCAATTTGAGGGAGATACTGCTTTGTTCAAACGCTACGCCTATTAAGAAACGTGGTGATAATATCTACGCATGTTCTTTCTGTAAGGAAGTTTTCGCCAAGCCAGCAGATCTCAAACGACACACCATGGACCACGAGGACTTCGCTAAAGAGAAATTAGCAAACAAGAAAGATTCGGACTTTATATGCATCAGTATAGATGTCACAGCACTGCTATGCAAAATATGCCACTTCGATATTGACTCTTTGGAAGAGTTGATCGTTCACCTGAAACGCGTTCATGGCAAAAATATGTCTCCGGATTCAATGACCCATATTTTGCCTTTTAAGTTTGATACGAAAGAGATGCGATGTATCATTTGTGCTAACGAATTCTATTCTTTTAGTAAATTACATGATCACATGAATGAACATTACAAGAATTATACTTGTAAACAATGTGACATTTTCTATGCGAATCCAAGAAATTTTAAAGCGCATATGTCTATGCATAAATCTGGATATTACAAATGTAATCATTGTCCAGCTGTATTTGACAGTTTATTAGATAATACCGAACACGCTAAATGCCATAAAAAACTCAAACCCGAACATGCTAAATGTAATAAAGAACTCGGAACTGTAAAGCGAAAAATTAAATGCTCTCTCTGCAGCGAAGTATTTAGTATTCGGTATCATAAAGAGAAACACTTAAGAGACGTCCACGGGGTTGCACAAACTCCTGTAAAATGTAAACGACGGAAAGTTACCAACAAAAGTAATATCGAGGAAAACAcggatattaaaattaaaactgaaGACGAAGAAGAACAGGGGACGGTGAAGAAAAGGGCGAAGGGGAACCAATTGGAGATGCATCGATGGACGATAAGACTGATAATGTTGTGCACAAATGCAACGCCGATACGGTGTCGCGGTGGTATTGGGTACGCCTGCTGCTTCTGCTCAGATCAGTACCCAGACCCTGCAGACCTGAAAAAGCACACCTTAGACGGACACGACGAAACCGTCAAGTGCACTTTCATGAAAGGAAAGGATCTATCAAAGTTTTACGTTAAACTCGACATCACATCTTTACATTGTAAATTATGTGACTTAAAGATTGACACTATAGACAATTTATTCGATCATCTAAAAGATTTTCATAAGAAAAGTGTATTTTGTGATACCAAAAAACAGATTGTACCGTTCAAATTTGACAGCGAAGGCTTAAAGTGCTCCATTTGTTCGAATAGTTTCCATACGTTCAGAGTGCTGGTAGAGCACATGAATTTACATTTTAGGAATTTTGTTTGTGATGTCTGTGACGCTGGATTCGTCAGCCAGAGTATTCTGTTCCAGCACGTCAAAACACACAGAACTGGCGAGTTTAAATGCGAGTACTGTTCGAAAATATTTGAGACTCTTCTAAAGAAAAGAGCTCACGAACGCGTAGTCCATACACACACGCATGTCTTGAACAAATGTGGGTATTGCGTACAAACTTTCAAAGATTACTGGCAGAAGGAAAAGCATTTAGCCGCCGTCCACGGTGTAAAAACTCCGCTCTTCAAATGTCAAGCCTGCGACAAAACGTTCACACAGCAAAAAGGATTAAGAATTCATACGAAACGTGATCATTTGATGGAGCGTCCCCACGCGTGCACATTATGCGACATGAAGTTCTTTACTGGAAAGAAACTCACGGAACACATGGTGAAACATACGGGATTAAGAGAGTTCCAATGTCATCTGTGCCACAAGTCATACGGGCGGAAGAAGACGTTGAATCAGCACATGCGTAATCATGACGACTATTGTAAGTTTAAGTGCGAGCACTGTGGCCAAGGATTTGTTCAAGAAAACAGCTGGGCTGGTCATTTGAGGACTAAACACGGAGTCACAGTTAGCGTGCCGAATTCCTGA
Protein Sequence: MTSDSDPDYEQKTAPKYSSTSQILKEKLDVDKHCTNLREILLCSNATPIKKRGDNIYACSFCKEVFAKPADLKRHTMDHEDFAKEKLANKKDSDFICISIDVTALLCKICHFDIDSLEELIVHLKRVHGKNMSPDSMTHILPFKFDTKEMRCIICANEFYSFSKLHDHMNEHYKNYTCKQCDIFYANPRNFKAHMSMHKSGYYKCNHCPAVFDSLLDNTEHAKCHKKLKPEHAKCNKELGTVKRKIKCSLCSEVFSIRYHKEKHLRDVHGVAQTPVKCKRRKVTNKSNIEENTDIKIKTEDEEEQGTVKKRAKGNQLEMHRWTIRLIMLCTNATPIRCRGGIGYACCFCSDQYPDPADLKKHTLDGHDETVKCTFMKGKDLSKFYVKLDITSLHCKLCDLKIDTIDNLFDHLKDFHKKSVFCDTKKQIVPFKFDSEGLKCSICSNSFHTFRVLVEHMNLHFRNFVCDVCDAGFVSQSILFQHVKTHRTGEFKCEYCSKIFETLLKKRAHERVVHTHTHVLNKCGYCVQTFKDYWQKEKHLAAVHGVKTPLFKCQACDKTFTQQKGLRIHTKRDHLMERPHACTLCDMKFFTGKKLTEHMVKHTGLREFQCHLCHKSYGRKKTLNQHMRNHDDYCKFKCEHCGQGFVQENSWAGHLRTKHGVTVSVPNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -