Aher020492.2
Basic Information
- Insect
- Agonopterix heracliana
- Gene Symbol
- ZEB2
- Assembly
- GCA_963693445.1
- Location
- OY856327.1:6150736-6163879[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.00015 0.011 16.9 5.0 1 23 536 559 536 559 0.92 2 9 2.8e-05 0.0019 19.2 5.3 1 21 565 585 565 587 0.94 3 9 0.04 2.7 9.3 1.0 1 20 593 612 593 614 0.93 4 9 0.071 4.9 8.5 1.7 2 19 633 650 633 655 0.92 5 9 4.6e-06 0.00031 21.7 2.4 1 23 939 961 939 961 0.98 6 9 0.00029 0.02 16.0 1.9 1 23 968 991 968 991 0.92 7 9 0.013 0.9 10.8 0.2 2 23 1000 1022 999 1022 0.96 8 9 0.0032 0.22 12.7 2.8 1 23 1028 1052 1028 1052 0.95 9 9 1.9e-05 0.0013 19.7 0.9 1 21 1058 1078 1058 1079 0.97
Sequence Information
- Coding Sequence
- ATGTCGGACGATGATGACGGGGACGGGGGTGGAGGCAAAAGTCTTCCTTCCTCTGTGAGGATAGATGTGTCTCAGCCTTTGTTTTCACAGTCGGTAAATATGGACGTAGAATCCTCTGCGGTTAAACGCCCAGCCCCTTCAACATCCCAGGATCCATcacctaaaaaaacaaattcaaatAGCCCATCGGCGTCTCTTCAAAGCACTTTTGTGAACCCCGAATTCGAGGGTGATTCTGCTTTGACTTATGGTAATGACGATTTTGGCCCCTTCATTGTTCACGTTTCGCGGGTGATCCCGGACCCTTCCGCTGGTTCTACAATTCGAGCGTTAAAACTGGCGCaatatttacacaaaaataaCATCCAGGGCATCCTTGACGGAGGTATCAAGGCTTTAGGTCGCAACAAAATTGCAATTGAGTTCAAAACTGCAAATGATGCCAACTCTTTCATCTCTAACCAAACTATTTTGCAATCTTACATAGTTCAGATCCCCAAGTACCACGTTACTCGCATGGGAGTCGTCCGCGGCGTCCCTGTCGAGTGGACACTTGAAGAGTTCGTGTCAAGTTTAACATATTCCCCAAAATGTGGACCAGTCATTAAGGCTAGACGTTTAAACAGAAAATCATATAAAGATGGATCCCCCCAATGGACTCCTACCTCCTCAGTTGTTATAACTTTTCAAGGCCAACACCTTCCAGAGAGGATATATAGTTTCAGGTATACATCAATGGTTGTGGAAGTTTATATGCTTCCTACTATTCAATGCCGAAAGTGCTGTCGCTTTGGCCATATTGCTGCTCAATGTAGATCACAAGCCAGGTGCTATAAGTGTGCTATGAACCATTTgggtgaaagttgtccagtccCAGACTTAGAAGCGTCTTGTTTTTTATGTCTTGGTAGACATAAAGCGATTGATGATAAATGTCCTGAGCACTCACGTCAAAAAGCTATAAAAATTGTTATGTCAGAAGAGAACATCAGCTTTTCTGAGGCCTCACAGAGGTATCGGCCATCACGACCATCTTACGCTGAAATGGCGCGGACAATGTTCTCTCCTCCTGACCCTCATATTTCTTTCTCCCCCATTAATGAAGATCCTCATCCTAGTACCCCTCCCTCTCTAAGTCGAGCCtataaaaaaactattactGTAAACCGAGCCCCTCGTCCCACATTCCCTAAAACCTTCGATTCCGTAGCCCATGACATAATTCAACAGCCCCAATCTTCATTTCCAAATGGAAGTGCTTTCCACCGTGAAAGGACTCCATCTCCCTCCCCAAATGACAACTTGATAGAATTGTTGGTATCTACTCTGTGGAACTGTAAAAGCATTCGTCATAAAAAATCGGATTTgatatttcttattaataaatttaatccTGTCATCTTTGCTGTCTCGGAGACTTGGCTGAGACCTGGTTCTATCTTCCGGATCCCGGGTTACTGCTGTCTCCGAGAGGACAGAGATGATGGGAAAGCTGGCACAGCCCTTTTGATTAGTGTGTTTTTGGATGTCACATCAGCTTACGATAATGTTCAACTCCCGGTGCTCAGGCAGAAGATGCTCAATCTGAGTCTTCCAGAGAGGCCCCACAAATGTGAGCAATGTGACAAAACGTTTCATAAAAAATCTGATTTGAAGAAGCATGTATCTGCAATGCACGAAGTTGAAAAGAAACATCCCTGCCCGGAATGTGACATGCATTTCAAAGATAAGTCCAATTTGAAGCGCCACATGAGTTGTCATACCAAAGAGAAACGTTTCTGTTGTCCTGGATGCGGCAACAGGTATTCACAGATAGCCTCAATGAAGCGCCACAGCAAGAACTGTCCGATGGTGAAGAATTCAAACGAGATGCCCATAGACAATACACGGAAGAATTACTGTAAAACGTGTGGCATAAGCTTCCAATATAAAAGTGCTTTGCTAGAGCACTGTGTGAGACAACACACCAACCCACCAAATGAAacggaaaaagaagaaaaaattcaAACAAACACCGATCCAACCGGCACCGTAGACAAAATTGTCGACGACATTCTATCCGCTGAAGACGATTATATGACCATGTCGACTCAAAACGAACTATTAGCTTATAACCAACACATAGACAATAATGACAACTTAATGCAAATAGAATTCCTAAAAGACATTAATCAACTACACACGCTGGACGATGAACTATTCTACAATGATATAGACTTCGATAGCTTTCAAACGAGCCAGATATTTAACACTAATGACATAGATTATAATGCTAACGATAGAAATGCAGAAATCCTATTCGATTTCGCTGATGGCGGACGTAGTATAGACCAAGATATCATGAACGCTTTATACCAAGTCAAAGAAAATCTACCAGATGAACTTTTGAATGTACCTCAAATGATAACGGAATCAGAaaaaccgaatgagattccaaaCACAGCTGTTTCTGTAAATGAATGCGCTACTATATTCGAAAGCGATGTCGATTTAGAAGCTAGTACCAATCTAGCTGCTAATTTAAATCAGTTAATTGGCGAGAATAGTGTCCAATATATATCTACGGAAGACGACGATACGTTTATTATAAGTTTGAATAGTGAGATAGATGCTGAACAATTGACTGACATGTTGTATATTGGTTTAGTTGATAAGAAACCTTTAGAGGAAAATATATCAGAAGATAATGATGCTACAGAATTTAATAGCAATGAAGTGGACCCGATAGTAGTTAAAATAGAAGAGCCTTTACGTTCTAAGGAGGAGAAAGATGAAAAAGAGACTGAAGTGAAGAGAAAAAAGAAAGTAGTTATTTATGTGTGTCGAAAATGTAACAAGGTTTTTAAGAAGAAGGATAATTACAGGTCTCATATTGCGACGCACGAGCCATCGCTACGTAGTCACAAGTGCACAGTGTGCGGAGAGCTGTTCAGTTACCGCTCCACTCTGAACAAGCACCGCGCGGCCAAGCACGAGCCGCGCGTGCTGCCTTCCGTCAAGTGTCACCTGTGCGGGCGAAGTTACGCCGCCGCGTGGATGGTGAAGAACCACATAGAGCGTGACCACGAGAGACGACTGCCGCACGTCTGTGACAGAAAGGACTGCGGACAGAAGTTCTACAAGAAAAGCGATCTGGATGTACATAAACGGTACCACACCGGCGAGCGTCCGTACAAGTGCGATATTTGCGCGCGCAAGTTCCCGCACGCCTCCCATTTGAAGAGGCATGTACGCGCCGTCGACTGTACCAaacagtaa
- Protein Sequence
- MSDDDDGDGGGGKSLPSSVRIDVSQPLFSQSVNMDVESSAVKRPAPSTSQDPSPKKTNSNSPSASLQSTFVNPEFEGDSALTYGNDDFGPFIVHVSRVIPDPSAGSTIRALKLAQYLHKNNIQGILDGGIKALGRNKIAIEFKTANDANSFISNQTILQSYIVQIPKYHVTRMGVVRGVPVEWTLEEFVSSLTYSPKCGPVIKARRLNRKSYKDGSPQWTPTSSVVITFQGQHLPERIYSFRYTSMVVEVYMLPTIQCRKCCRFGHIAAQCRSQARCYKCAMNHLGESCPVPDLEASCFLCLGRHKAIDDKCPEHSRQKAIKIVMSEENISFSEASQRYRPSRPSYAEMARTMFSPPDPHISFSPINEDPHPSTPPSLSRAYKKTITVNRAPRPTFPKTFDSVAHDIIQQPQSSFPNGSAFHRERTPSPSPNDNLIELLVSTLWNCKSIRHKKSDLIFLINKFNPVIFAVSETWLRPGSIFRIPGYCCLREDRDDGKAGTALLISVFLDVTSAYDNVQLPVLRQKMLNLSLPERPHKCEQCDKTFHKKSDLKKHVSAMHEVEKKHPCPECDMHFKDKSNLKRHMSCHTKEKRFCCPGCGNRYSQIASMKRHSKNCPMVKNSNEMPIDNTRKNYCKTCGISFQYKSALLEHCVRQHTNPPNETEKEEKIQTNTDPTGTVDKIVDDILSAEDDYMTMSTQNELLAYNQHIDNNDNLMQIEFLKDINQLHTLDDELFYNDIDFDSFQTSQIFNTNDIDYNANDRNAEILFDFADGGRSIDQDIMNALYQVKENLPDELLNVPQMITESEKPNEIPNTAVSVNECATIFESDVDLEASTNLAANLNQLIGENSVQYISTEDDDTFIISLNSEIDAEQLTDMLYIGLVDKKPLEENISEDNDATEFNSNEVDPIVVKIEEPLRSKEEKDEKETEVKRKKKVVIYVCRKCNKVFKKKDNYRSHIATHEPSLRSHKCTVCGELFSYRSTLNKHRAAKHEPRVLPSVKCHLCGRSYAAAWMVKNHIERDHERRLPHVCDRKDCGQKFYKKSDLDVHKRYHTGERPYKCDICARKFPHASHLKRHVRAVDCTKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -