Basic Information

Insect: Agonopterix heracliana
Gene Symbol: -
Assembly: GCA_963693445.1
Location: OY856319.1:16237749-16249750[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.7e-06 0.00032 21.6 1.7 1 23 291 313 291 313 0.98

2 9 4.5e-08 3.1e-06 28.0 1.6 3 23 321 341 319 341 0.98

3 9 0.00016 0.011 16.8 0.3 1 23 347 369 347 369 0.98

4 9 1.7e-05 0.0011 19.9 1.7 1 23 375 397 375 397 0.99

5 9 3.4e-05 0.0023 18.9 1.7 2 23 572 593 571 593 0.96

6 9 4.4e-09 3e-07 31.2 1.6 1 23 599 621 599 621 0.98

7 9 0.0037 0.26 12.5 0.6 3 23 629 649 627 649 0.97

8 9 9.6e-05 0.0066 17.5 1.5 1 23 655 677 655 677 0.99

9 9 0.03 2 9.7 0.8 1 23 683 707 683 707 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.7e-06	0.00032	21.6	1.7	1	23	291	313	291	313	0.98
2	9	4.5e-08	3.1e-06	28.0	1.6	3	23	321	341	319	341	0.98
3	9	0.00016	0.011	16.8	0.3	1	23	347	369	347	369	0.98
4	9	1.7e-05	0.0011	19.9	1.7	1	23	375	397	375	397	0.99
5	9	3.4e-05	0.0023	18.9	1.7	2	23	572	593	571	593	0.96
6	9	4.4e-09	3e-07	31.2	1.6	1	23	599	621	599	621	0.98
7	9	0.0037	0.26	12.5	0.6	3	23	629	649	627	649	0.97
8	9	9.6e-05	0.0066	17.5	1.5	1	23	655	677	655	677	0.99
9	9	0.03	2	9.7	0.8	1	23	683	707	683	707	0.95

Sequence Information

Coding Sequence: ATGACAGAAGTTAAAACCAAACCTCTTCACGACGAACTAGAAAAACGCAATGAACTATCACAAAAAACAAGTCTACAACAAAAACTCTTTAACAAAGTAGTAGAAGCACGCTTGCTGTCGGTACAGGAGCGCAGGAAGGGGGCGGGCAGCCCGCTGGACCAGTTTGGAGGCGCAGGCGCAGAGCGGGATAAACCGCGATCGTCCTTCAGCCTACTGCCTGATATAACTTGTTTTTTTGTGCCCCCACTCGATGatacgACAGCGCCGTACGTGCTATACAAAGATGGCGTGGAGCGCGCCCCTCCCGGCACCCAGTGGGGCAGCGGCATGCTTGACGGCGGCTACCAGCCCATGCAGCACCAGAGCCCGGGCGGACCCTCACCACAGCCGGAACCACAGCTCGCCTCCCCCGCCCCCTCGCCGTATCCCCCCGCACCCCCACCCCCGGACCCAACAGGCGCACAAGACGACGCGGCACAACAGCTCGCCCAGCAACAGGCACAACAGCAAGCGCAGCAACAGcagcaacaacaacaacaaacgtCTCCCGAGCATATGCAAGTCGAACAGCAACTACAGAACCAGCAACCACCACCGTCCCAAGACCACCTAGACAGGACACCCTGCTTTGTACCACAACCTGACTTACAGCAGCAATACACGCCGTATTTCAAAGAGACCAGACCGGCTAGTCATATGCTCGGAACAGGTGGTTTCCCGTTACATTATCTGAAACAGAATGGCGGAGTTTTATCTCTGGAAGGCCCGCTAGATCAGTACGCGACGCCAGAATTGCGTCACTTGCCCGACATTGTGCAACCTGAGCCACCAAAGCCGCGGAAACACAACCCAAACTCTGAACTGCGTCTGTTCAAATGCCTGACTTGCGGGAAAGATTTCAAACAGAAGTCGACGTTGTTGCAACACGAGCGCATCCACACGGACTCGCGGCCATACGGGTGCCCGGAGTGCGGCAAGCGGTTCCGCCAGCAGTCGCACCTCACCCAACACCTGCGCATCCACGCGAACGAGAAGCCCTACGCGTGCCTCTACTGCCCGCGCTCCTTCCGGCAGCGCGCCATCCTCAACCAGCACCTCCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATACCCCGGCCCGATCCCCGCGCGCGTCGCTGGCACCGACACTGATCGGTGCCGGCGGCGCCTGCGATCCTGACCGAACCCCACACGTTCGATTCGGTCTCACAATTGGCCTTCCTATCAATCAAATTCTCGGTCCCCTCGTCGCCCGTCTAGCAGGGCGAGACGCGGAACTGACCGCCGGACGCTCCTGTAACCACGTGTCGCCGCATCTCATCTTCAAGAACGGAACGACGCCTACGTTGTGGCCGCAGGATGTACCCTACCCTCCGGATGAGAACAAGGAGGAGGTGCAGTCAACCTACGGCGACGGGGACGGGCAGAACGGAGAACAGCGCGGGTCGTGTTTCTCACCCGGTGACACCGCACAGTATCCAGCTTACTTCAAAGACACTAAGGGGCTAAATCACACCGTGTTTGGATCAGGGTTATCACTCCAATACCTTAAAGGTAGTAAATTGCCTGATGTCCTCGGGGGTCGCGCAATGCCCCTATACGTTCGTTGTCCAATCTGCCAAAAGGAGTTTAAACAGAAGTCAACCCTGCTTCAACACGGCTGCATTCACATAGAGTCGCGGCCGTACCCTTGTCCAGAATGTGGCAAACGATTCCGCCAACAGTCGCATCTCACGCAGCACTTACGCATCCACACCAACGAGAAGCCTTACGGTTGTGTGTATTGCCCTCGCTTCTTCCGGCAGCGGACAATTTTGAATCAGCATCTCCGTATCCACACCGGCGAGAAGCCTTACAAATGCACGCAGTGCGGGAAAGACTTCCGACAGAAAGCTATTCTGGACCAGCACACTCGGACGCATCAGGGTGACCGGCcgttctgctgtcccatgccaAACTGCAGGCGGCGGTTCGCTACTGAGCCGGAGGTTAAGAAGCATATCGATAACCACATGAATCCGCACGCAGCAAAAGCGAGGCGCGCTGACGCCTCGAAAACTCCGCGGCCGTTGCCGCCGGCGTCGGCCGTAGTGAAGCCGGAGCTGTATTTCCCGCAGTGCTACGCGCCGCCTTTCCAGCAGTTCCCGGGTTCGGGCGCCACGGAGTTCAAGCCGAACGTGGGCCCGGGCGCGCCGGTGCCCTGCCTGCCGGCCCAGTGA
Protein Sequence: MTEVKTKPLHDELEKRNELSQKTSLQQKLFNKVVEARLLSVQERRKGAGSPLDQFGGAGAERDKPRSSFSLLPDITCFFVPPLDDTTAPYVLYKDGVERAPPGTQWGSGMLDGGYQPMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDPTGAQDDAAQQLAQQQAQQQAQQQQQQQQQTSPEHMQVEQQLQNQQPPPSQDHLDRTPCFVPQPDLQQQYTPYFKETRPASHMLGTGGFPLHYLKQNGGVLSLEGPLDQYATPELRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACLYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYTPARSPRASLAPTLIGAGGACDPDRTPHVRFGLTIGLPINQILGPLVARLAGRDAELTAGRSCNHVSPHLIFKNGTTPTLWPQDVPYPPDENKEEVQSTYGDGDGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHTVFGSGLSLQYLKGSKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADASKTPRPLPPASAVVKPELYFPQCYAPPFQQFPGSGATEFKPNVGPGAPVPCLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00428362;
90% Identity: iTF_00761912;
80% Identity: -