Basic Information

Insect: Agonopterix heracliana
Gene Symbol: -
Assembly: GCA_963693445.1
Location: OY856324.1:3458210-3467370[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.02 1.4 10.2 3.1 1 23 129 151 129 151 0.97

2 13 4.5e-05 0.0031 18.6 1.4 2 23 157 178 156 178 0.96

3 13 0.00065 0.045 14.9 0.2 2 23 182 203 181 203 0.97

4 13 0.0043 0.29 12.3 0.8 1 23 217 239 217 239 0.98

5 13 2.2e-06 0.00015 22.7 0.4 2 23 249 270 248 270 0.96

6 13 7e-06 0.00048 21.1 0.5 1 23 276 298 276 298 0.98

7 13 3.9e-06 0.00027 21.9 1.1 3 23 306 326 305 326 0.99

8 13 2.9e-07 2e-05 25.5 0.4 1 23 332 354 332 354 0.96

9 13 8.2e-06 0.00056 20.9 0.7 1 23 360 382 360 382 0.98

10 13 5.9e-06 0.00041 21.3 0.3 1 23 388 410 388 410 0.98

11 13 0.0044 0.3 12.3 5.9 1 23 416 438 416 438 0.97

12 13 5.3e-07 3.6e-05 24.6 1.4 1 23 444 466 444 466 0.99

13 13 0.00019 0.013 16.6 1.3 1 20 472 491 472 494 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.02	1.4	10.2	3.1	1	23	129	151	129	151	0.97
2	13	4.5e-05	0.0031	18.6	1.4	2	23	157	178	156	178	0.96
3	13	0.00065	0.045	14.9	0.2	2	23	182	203	181	203	0.97
4	13	0.0043	0.29	12.3	0.8	1	23	217	239	217	239	0.98
5	13	2.2e-06	0.00015	22.7	0.4	2	23	249	270	248	270	0.96
6	13	7e-06	0.00048	21.1	0.5	1	23	276	298	276	298	0.98
7	13	3.9e-06	0.00027	21.9	1.1	3	23	306	326	305	326	0.99
8	13	2.9e-07	2e-05	25.5	0.4	1	23	332	354	332	354	0.96
9	13	8.2e-06	0.00056	20.9	0.7	1	23	360	382	360	382	0.98
10	13	5.9e-06	0.00041	21.3	0.3	1	23	388	410	388	410	0.98
11	13	0.0044	0.3	12.3	5.9	1	23	416	438	416	438	0.97
12	13	5.3e-07	3.6e-05	24.6	1.4	1	23	444	466	444	466	0.99
13	13	0.00019	0.013	16.6	1.3	1	20	472	491	472	494	0.94

Sequence Information

Coding Sequence: ATGTACAACTTGTCCACCAGTTGCCGGGCTTGTATGAAGGACAGTGAGAATTTGTTTGACTTGTTCCAATCATACACTTTTGAGGATCAAAGTTCCGACCTGGCCCAGGTCCTTATGGAGTGTACTACCACACAGaTATCAAAAGAAGATGGTCTGCCACAGAAGGTGTGTTACGACTGCATTGAAATactcaaattattttattcattccGCAGTCAGGCTCTGAAAGCCGAAACTGAGTTCAAAAAACAATTCCTACTCGAAACTGAGGTGAAAGATGAAAAAAttgaaatacaatttaaaaacgaGTTCGATGAAGACATCGACTCTTTCGATAATTACATTTACGACCCACCGGCTAAAGAAGAGATTGAAGATAAACAGTATTATTGCAGTAAATGTAAGAAGCAATATACAAGTGAGAAACGATATCTGAATCATTTAGCGAGTCACGATGCAGTCCCGTTATCATGTACGATTTGCAACAAATCGTTTCAGAAGCAATCAACGTTGGACAAACACTTGGCTAAGCACGATGAACAACGATGTACGATATGTAATGTTAAGTTCGATTCAGAACCACTTCTCATGAACCATATGGTCACTCATACTGAAATTAAAGCAGAAATTGAAACGGAAGACAATATATTTAGATGTCTCATATGTAATTTAGGTTTTAACTCTGTCCGCTCTCTAGCTATGCATAAGAAGAAGCATAAAAACAGAAAGAAACCGTCGAAAGTTGTTTGTGATATTTGTAATAAAGAATTTAGTTCAAAATCTCCGCTGCGTAGGCATTTGAAATTGCACGGTAAAGAAAGGCCGTTTCAATGTCCAAAGTGCCCAATGAAATACTCAAGAGCTGATCAATTAGACTCGCACATGAGTCGCCATGATGGGTATAAGAAAAATCTGTGTCCTTATTGTAATAAAGGGTTCGCACAAGCATGCAGCCTGAAGGACCACATACGCACCCACACCGGTGAAACTCCATACTTGTGCTCAGAATGCGGGAAGGGGTTCGCCAACTCGTCTAATTTACGTCAGCACCTACTGCGACACTCCGGTGCAAAGCCGTTCACTTGTAAACTGTGCCCCAAGGGTTTCTCTACTAGAGGTCAGATGACGTCGCACCTGGCCACGCACACGGGCGCGCACCCGTACACGTGCGACGAGTGCGGCGCCGCCTTCACCAAGCCCAACTCTCTGAAGAAGCACAAGCTGATACATCTCGGCATCAGGGCGTTCGCCTGCGACTCCTGCGATATGCGATTCACGTGCAAGGATCACCTGAAGCGTCATTACCGCATCCACACCGGCGAGAAGCCATACAAGTGCAACTTGTGCGAGCGAGCCTTCACACAGAGCAACGACCTCATCAAGCACACGCGCACACACGTCGGCCTCAACATCTACCAatgcACAATGTGCGATCTAAGATTCCGATTAAAAAGCGAACTAAAGCAGCACTACCCGTCTCACTACACCAATTCCAACACCATTCCCAACATAGCATCAAAAGACCAATCTGACAGTGAAGCAATGGAAACTGAACTCCCTGAAGATAAGGTACAAATTGCAACGAGTGACAAGAACGATCTGGATGGACGGATAACTATAACTTTCAACAGCAATGTGCTGAACAAAGACGGCATAGCCGGTGATATTACTATTAATATAATGCCTGAGAAAAGTTAG
Protein Sequence: MYNLSTSCRACMKDSENLFDLFQSYTFEDQSSDLAQVLMECTTTQISKEDGLPQKVCYDCIEILKLFYSFRSQALKAETEFKKQFLLETEVKDEKIEIQFKNEFDEDIDSFDNYIYDPPAKEEIEDKQYYCSKCKKQYTSEKRYLNHLASHDAVPLSCTICNKSFQKQSTLDKHLAKHDEQRCTICNVKFDSEPLLMNHMVTHTEIKAEIETEDNIFRCLICNLGFNSVRSLAMHKKKHKNRKKPSKVVCDICNKEFSSKSPLRRHLKLHGKERPFQCPKCPMKYSRADQLDSHMSRHDGYKKNLCPYCNKGFAQACSLKDHIRTHTGETPYLCSECGKGFANSSNLRQHLLRHSGAKPFTCKLCPKGFSTRGQMTSHLATHTGAHPYTCDECGAAFTKPNSLKKHKLIHLGIRAFACDSCDMRFTCKDHLKRHYRIHTGEKPYKCNLCERAFTQSNDLIKHTRTHVGLNIYQCTMCDLRFRLKSELKQHYPSHYTNSNTIPNIASKDQSDSEAMETELPEDKVQIATSDKNDLDGRITITFNSNVLNKDGIAGDITINIMPEKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00027070;
90% Identity: iTF_00027070;
80% Identity: -