Basic Information

Insect: Agonopterix heracliana
Gene Symbol: -
Assembly: GCA_963693445.1
Location: OY856318.1:3585409-3609835[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00064 0.044 14.9 2.7 1 23 15 37 15 37 0.99

2 23 0.02 1.3 10.3 9.3 1 23 44 67 44 67 0.95

3 23 0.12 8.5 7.7 2.2 1 23 71 93 71 93 0.97

4 23 0.0011 0.072 14.3 4.4 1 23 98 121 98 121 0.96

5 23 3.5 2.4e+02 3.2 0.1 2 23 126 148 125 148 0.93

6 23 0.044 3 9.2 0.0 2 20 159 177 159 179 0.95

7 23 0.00037 0.025 15.7 0.3 3 23 189 209 189 209 0.99

8 23 2.8e-05 0.0019 19.2 1.1 3 23 222 243 221 243 0.95

9 23 0.016 1.1 10.5 0.0 2 23 267 288 267 288 0.97

10 23 2e-07 1.4e-05 26.0 1.0 1 23 294 316 294 316 0.98

11 23 0.00072 0.049 14.8 0.6 1 22 322 343 322 343 0.97

12 23 0.013 0.92 10.8 5.0 1 23 615 637 615 637 0.98

13 23 2.6 1.8e+02 3.6 2.7 1 23 644 667 644 667 0.87

14 23 0.031 2.1 9.6 2.6 1 23 671 693 671 693 0.98

15 23 0.00027 0.018 16.1 5.8 1 23 698 721 698 721 0.97

16 23 0.003 0.2 12.8 0.1 2 23 726 748 725 748 0.96

17 23 0.0086 0.59 11.4 0.1 2 20 759 777 759 779 0.95

18 23 0.00073 0.05 14.8 0.1 5 23 791 809 789 809 0.95

19 23 0.47 33 5.9 0.2 3 23 827 848 826 848 0.96

20 23 0.0014 0.096 13.9 2.1 3 23 871 891 869 891 0.95

21 23 0.0012 0.085 14.0 5.2 1 23 897 919 897 919 0.98

22 23 6.8e-05 0.0047 18.0 0.7 1 23 925 947 925 947 0.98

23 23 0.00044 0.03 15.5 6.7 1 23 953 976 953 976 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00064	0.044	14.9	2.7	1	23	15	37	15	37	0.99
2	23	0.02	1.3	10.3	9.3	1	23	44	67	44	67	0.95
3	23	0.12	8.5	7.7	2.2	1	23	71	93	71	93	0.97
4	23	0.0011	0.072	14.3	4.4	1	23	98	121	98	121	0.96
5	23	3.5	2.4e+02	3.2	0.1	2	23	126	148	125	148	0.93
6	23	0.044	3	9.2	0.0	2	20	159	177	159	179	0.95
7	23	0.00037	0.025	15.7	0.3	3	23	189	209	189	209	0.99
8	23	2.8e-05	0.0019	19.2	1.1	3	23	222	243	221	243	0.95
9	23	0.016	1.1	10.5	0.0	2	23	267	288	267	288	0.97
10	23	2e-07	1.4e-05	26.0	1.0	1	23	294	316	294	316	0.98
11	23	0.00072	0.049	14.8	0.6	1	22	322	343	322	343	0.97
12	23	0.013	0.92	10.8	5.0	1	23	615	637	615	637	0.98
13	23	2.6	1.8e+02	3.6	2.7	1	23	644	667	644	667	0.87
14	23	0.031	2.1	9.6	2.6	1	23	671	693	671	693	0.98
15	23	0.00027	0.018	16.1	5.8	1	23	698	721	698	721	0.97
16	23	0.003	0.2	12.8	0.1	2	23	726	748	725	748	0.96
17	23	0.0086	0.59	11.4	0.1	2	20	759	777	759	779	0.95
18	23	0.00073	0.05	14.8	0.1	5	23	791	809	789	809	0.95
19	23	0.47	33	5.9	0.2	3	23	827	848	826	848	0.96
20	23	0.0014	0.096	13.9	2.1	3	23	871	891	869	891	0.95
21	23	0.0012	0.085	14.0	5.2	1	23	897	919	897	919	0.98
22	23	6.8e-05	0.0047	18.0	0.7	1	23	925	947	925	947	0.98
23	23	0.00044	0.03	15.5	6.7	1	23	953	976	953	976	0.96

Sequence Information

Coding Sequence: ATGCTTTTAAGAAAAGAGTCAACAAATTACCGGCTGAATCGTTACAAATGTAATTTTTGCTACAAAGGCTTTATATCTCTTACAACATATGCTAATCATATGAAAAAACATAGTCCGAAGCTTGGAGTATTCGAATGTGATCACTGTCACCAAAGGTTTTCTAAGAAGTTTCGTTTAAGGCGCCACATTGAGCAATGCCACAGATGGAAGTATGAGTGCAAAATCTGTCAATATGTTTGCTACTCCACGTCTCAAAGAGGTTCGCACATTAATCTTCACAAAGGAAAGATTTTTGAGTGCCAAGAGTGCGGAAAACGTTTCAAATTGTCCAACACTCTGTCGTCTCACAAACGCCACAAGCACCCTACGGAGGTAGTGTGTGCATTGTGCGGCAGTTTGTTCGGTTCTCTGCTGGGTCTCAACTCACACCAGAAGTTGTCACATAAACAGGATAGTACAGAACTGCTGGGTCCCAAATGTGAAGAGTGTGATGTTCAGTTCGCGACAGAAACCGCGTGGAAGCGACATCTGGTGTTATCTTCTAAACATACTGTGAGTAATGGATGTGGTGTATGTGGTGAAACTTTCAATACCGATGAAGATTTAAGAATTCACAAAAAAACGCATCCTACGGCGCATCAAAACTACGCTTATCGTAACAATTGTAAGATTTGCAACAAAATGTTTGAGACACAAAGCGAGTACAGGAAACACGTGAAGTTAGCGCATCCTAATTCTGATGTACCGAAAAAGATAAAAAAGCATTTCTCTCCTATTTCAAAAAAATCAACGCCGGCAGTCTGCGAAGTGTGCGGGAAGATTGCCCagAATGTGTACGCACTCCGTGATCATCAACTGACGCATATCAACAAACGTCCTTTCGAGTGTAGCGAGTGTGGCAAAAGATTCACTCAGCGCGCCTCCCTGCGCACACACCAAAACGTACACACACGCAAACACGTCTACGAGTGCGATGTGTGCCAGAAACAGTATGCCCATAAGCTAGGACTCACTAAACATATTAAGACCGATGATGACTCAAAAACATATATTTGTTACGAGTGTGCAACTTTACTGCTCAAGTATCAGGAATTTCGTTTGAAGTGTGTGACATCCCTCAACGTGTTAACTTCTCTTAATGTGGACCACTCCAAGatATCTAAAAAGCTAATCAAAAGCATTGATAGAAATTACCACAATTTGGTCTCTAAATTAACACCATGCTCCATATTGGTATGTGATACTAAAGACCAATATCTGATACCAAACAATTGTATGAATTCTgaagcgaaaaaaaacatagaGTCAGAATTAGAGATTGAATCAAATGTAgttgaaattaaattagaaatTGATACTTGTGACAGTgaagtaaattatttaaatgaaaataagGATCGAGACATAAACACATCCAATGAAATTACCGTTCAGCCAAAAGAtgaattaaatgaaaatttaacaaacaacaacaaagatTGTCTTCAACAAATAAAACTGAAACCGAAAtgtttaacaaaattaaagaAACCAAAAGAAAATGCTAACACATCAAGCACTGCTCGGAATAAGAAAAAGCAAATTAGTTGTGAGAAAAGTGATAGCAATTTAAAAGATAAACCCATagcaaagaaaagaaaaaagaaattaagtCAAGGTGCAGAAGATTTGAAGGATGAACCCATAGCAAAGAAATCAAAGagcaaaaaagtaaaaaaaaagaaattgagaGAAGGTGCAGATGAATTAGAAAATTATTTAACAATAGAATCTTTGACTCCAATGGAAATTCGAGACAAAATCTTATTACGGAGAGAGTCCAAAAATTATACTCAGAATCCACACAAATGTGATTTATGCTACAAAGGTTTTATGACCAAAACAACTTATGATAATCACATGAAGAAACACAGCTCGGAGTTTGGTAATTTCGAATGTGAATACTGCCACGTAAGGTTGCACAGAAAGAATCTTATGAATCTCCACGTGGTTTATAACCATGGAAGGAAATTTAATTGTAAAACGTGCCCATTTGTTTGCTACTCCCAGAATCAAGCTTACGCACACATGAACACTCATAAGGGCAAGAAGTTCGAGTGCAAAGAGTGTGGAAAATGTTTcagGGCGTCGTCAACTCTATCAACTCACAAACACACTAATCATAAAAGAGAGTTAGTGTGCACACAGTGCGGGGACATGTTCGGCTCTCCGCAGGGTCTGAATAGACACCAGAAGATAACACATAAGCAGGATAGTACAGACCTGCTGGGACCCAAATGTGAGGAGTGTGATATTCAGTTCACGACAGAAACCGCGTGGAAGCGACATCTGGTGATCTCTTCTAAACATACTGTGAGTAACGGATGTATTGAATGCGGCGAATCTTTCCCTAACGAGGAAAGCCTAAAAATTCACAGGAAAACACACCCTCGGAAGATATATCACGATATATACAATGGTTTTAATCCGCCCGCCGCCTGTGAGATGTGCAACAAATGGCTGACAACCCGCCGTGAGTTCGCAGCACACGTGAAGTCAGAACATCCTAGCTCTGCTATAGCAAACAGGATCAAGAGGAAGGAAAAGTCTAAAAAGGCATTAGTGTCATGTTGTGAAGTGTGCGGATTAGTTTGTAAGAATAAATGGCAGCTGGAAGCTCATCAAGTGAAGCACACCGACGAGCAACGCTTCGAGTGCAGCGAGTGTCTCAAGAAGTTCAGATACAGATGCAGCCTCTACCAACACATGAACATGCACACACGCAGGCGCGTGTATGAGTGCGATCTGTGCCAGAAACAGTATTACACCAAGTTCGCACTCATCAAACATATCAATGTTCACTTCGGGGTTCGTCCGTTCGAATGCGAATTTTGTCAAAAATGTTTCTTCCACAAGTACGAACTTAAAAATCACATAAACTACGTCCACTACGGGCACGCGATgccgaaacgaaaaaaaagaatcagaaaAAGTGTTGCAAGACAAAGTTCAGTTGTGTGA
Protein Sequence: MLLRKESTNYRLNRYKCNFCYKGFISLTTYANHMKKHSPKLGVFECDHCHQRFSKKFRLRRHIEQCHRWKYECKICQYVCYSTSQRGSHINLHKGKIFECQECGKRFKLSNTLSSHKRHKHPTEVVCALCGSLFGSLLGLNSHQKLSHKQDSTELLGPKCEECDVQFATETAWKRHLVLSSKHTVSNGCGVCGETFNTDEDLRIHKKTHPTAHQNYAYRNNCKICNKMFETQSEYRKHVKLAHPNSDVPKKIKKHFSPISKKSTPAVCEVCGKIAQNVYALRDHQLTHINKRPFECSECGKRFTQRASLRTHQNVHTRKHVYECDVCQKQYAHKLGLTKHIKTDDDSKTYICYECATLLLKYQEFRLKCVTSLNVLTSLNVDHSKISKKLIKSIDRNYHNLVSKLTPCSILVCDTKDQYLIPNNCMNSEAKKNIESELEIESNVVEIKLEIDTCDSEVNYLNENKDRDINTSNEITVQPKDELNENLTNNNKDCLQQIKLKPKCLTKLKKPKENANTSSTARNKKKQISCEKSDSNLKDKPIAKKRKKKLSQGAEDLKDEPIAKKSKSKKVKKKKLREGADELENYLTIESLTPMEIRDKILLRRESKNYTQNPHKCDLCYKGFMTKTTYDNHMKKHSSEFGNFECEYCHVRLHRKNLMNLHVVYNHGRKFNCKTCPFVCYSQNQAYAHMNTHKGKKFECKECGKCFRASSTLSTHKHTNHKRELVCTQCGDMFGSPQGLNRHQKITHKQDSTDLLGPKCEECDIQFTTETAWKRHLVISSKHTVSNGCIECGESFPNEESLKIHRKTHPRKIYHDIYNGFNPPAACEMCNKWLTTRREFAAHVKSEHPSSAIANRIKRKEKSKKALVSCCEVCGLVCKNKWQLEAHQVKHTDEQRFECSECLKKFRYRCSLYQHMNMHTRRRVYECDLCQKQYYTKFALIKHINVHFGVRPFECEFCQKCFFHKYELKNHINYVHYGHAMPKRKKRIRKSVARQSSVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -