Basic Information

Insect: Agonopterix heracliana
Gene Symbol: -
Assembly: GCA_963693445.1
Location: OY856314.1:19684248-19687004[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.2e-09 1.9e-06 28.1 0.0 1 41 17 57 17 60 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.2e-09	1.9e-06	28.1	0.0	1	41	17	57	17	60	0.92

Sequence Information

Coding Sequence: atgGCACCGAAGGAGtctaaaaaatctagaaaaaaaaccGCTACGTACACGGAAGATTCCTTAATAAAGGCTTTAACGGAAATTCGGGAAAAAAAGGCATCAGTTAGACAAGTCTGTAGAGATTATGGGATTCCTAAATCTACGGTCCTCGATAGAATACACGGCAAAACAACTGATAACTTAAAGAAACGTGGGCCAGATCCCGTATTAGGGACTGGTGGAGAAGAGAAAATAGTTAATTGGCTGATTAACATATCAAAATGCGGGTTTCCTGTTAAAAAACAGGAACTTTTAGATTCAGtccaaaaaattctacaagatTCGTCGATTCCTAATAAATTTAAAGACTGTAGACCTGGCCAAACGTGGtatcttaactttttgaaaagaaACCCACAAATTTCGTGCCGATCCGCCGAAGGTATTAATAAGGCAAGAGCTCAAGTAAGCGAAGAGTCCATCCGAAACTGGTTCAGAGGTCTCGAGACGTATTTGGAAGAGATAAATCAAAAAGACATTCTTAACCGTCCTTCGAGCATTTTCAACGGCGACGAAAGTGGTTTTGCGCTGTGTCCGAAGACTGGCAAAGTACTGGGGCCCAGGGGTTACCGTAACTTATATCAAGTTAAACAGGGGAACGAAAAAGACAACTTAACAGTCCTTGTAACCTTCAATGCTAATGGAGATGTCTGTCCACCATGCGTGGTATTTCCGTATGTGAAACCACCACAGGCAGTGGTGAAGAGCATGCCACCTGATTGGTGTTTGGGCAGGTCGGAGTCAGGATGGATGCGGGGAGACGTATTTTTTGAATACGTCACCAATGACTTCAATAACTGGCTTGAACGGAATAATATCCAAAAACCGGTCCTCTTGCTGGTTGACGGACACAAATCTCACATGTCTCTGATGCTAAGCACAGTATGTGAACAGATGGATATAATATTATATGCCCTACCGCCCAACACGACGCACATCCTCCAGCCTGCTGACGTAAGTGTATTTGCGCCACTCAAAGCAAGCTGGAAGAATACAGTCCGAAGATTTTTAGCAAAGCCAGAAAATATCAATACATCGGTTACTAAAACAAACTTCTGCAAATTGTTTGCAGATACCTTGCAAGAAACAAATCTTCCAACCTGTATCAAAAACGGGTTTAAACGATGTGGGCTTTACCCCTTTGACCCTAATGCGCCTGATTACACTAAATGTGTCCTCGATACATTGCAAAATTTAAACTCTGGACAGACTACTCCCGGAAAAGCCATAAGTAGAGCAGACGTAGCTACTACCAAAAAAGTACTAAAGCAATTAAAAACTGCGCTGCTAAGCAAGAACGTAAACTACAGAGCACTAATGAAAGAACTTAACGTGTTTAAAAAAACACTGCCTGTGGAGACTAATGTTTCTGAATTATCATTAGACACTGAATCCGACTACACCAACAGTACCGTACAAAACGGTTCTTGTAACAGTACAATGCAAAACAGTTCACAGATGTCATCAAACTCGGCCAGTCTTACTGTAACAGATTTACTGAAACAATCTGAGGACACACAGCTCATACAGCCGACTCCATGCGTTATAGAACTGGGTACCGATACGGTTGAAATCATCCAACCGCCATTGAACGTAACTGAAGACTCCATATCGTTATTAAATATAACAGGAAGTTACCTAGACGTTGGTTCAGTGGTAAGCCTTGATGACATTTTAATACTGCCCTTGAATGACACAAATGAGGTGCCAACGCCTGGGACGTTGGATGTATGCGAAAAGTTATCTGAGATAAAATCACCTGACGATCAGGCTAGCTCAGCCGTTTCTACGCGTTCAATCCCATCGGCTGTACCTAAAACACTCACTTGGGCAGACACAGAAGATCTGACTTCATCCGGTGTTGTCTCATCTGCTGATACTATCAAAAAAGGAGCGGTATCTTCTATTACATTGGTTGCACCTGAAACATCTACTTATGCAAAAACAGCAGAACATCCTGTAACAGTAGATCAACCTACTCCAATCCCTATGGAAGAGGATACTCCATCTAAGATCGTATCTCCAACTGAAATCGCATTAGAACAAGAGGATCACATAGTTATCCAAAAACAGATTGAAACATCATCACTCAATGATCCTGAGAAACGCCTCCAGTCAAAAATAGTGGAATGTCCAACATCAACATCGATTACCGCTTCTAACATTAGTGACACACAGAAAGAGGCTGAGCCCATAGTAACTGATCCTTTTGAGCGCCATTTGTATTTGCCAGACCACCTTGTAAAACCAAAAAAACCAACGAAGAATAAAATTCACGCTGCCATTTCTTCTGCAGCGTGGAGGGAGCATTATGAAATGCGAGATCGATTAAAGAATCTAAAACAAGAAGAAACTAGAAAGCGAAAATTAGAACGCATCGAAAGACAACAACAAGCAAAAATATTAAAGGAAAATAACTCCAAGAAAAAGCCAGGCTCGAAAGTAAAAAcgacacaaaaacaaaatatagatTACCGACCAAGAATTGTGCGCGGGGCTCGAAAAGAAAATGACGTTGCTCCAACAGCTGCATCTGGAAAGATATCTTGTTCAGAATGTGATGATGATTTAGTTTCGGATGTAGAAGAAAATGAAGATAAAAATATTGGATGTGATGCCTGTCCTCGGTGGTACCACCTTAAGTGCACATTATTTCAAGGGCAGTCATATGATGATGTAAAGGATAAACCTTACAAATGTAACCATTGTGATTATTAA
Protein Sequence: MAPKESKKSRKKTATYTEDSLIKALTEIREKKASVRQVCRDYGIPKSTVLDRIHGKTTDNLKKRGPDPVLGTGGEEKIVNWLINISKCGFPVKKQELLDSVQKILQDSSIPNKFKDCRPGQTWYLNFLKRNPQISCRSAEGINKARAQVSEESIRNWFRGLETYLEEINQKDILNRPSSIFNGDESGFALCPKTGKVLGPRGYRNLYQVKQGNEKDNLTVLVTFNANGDVCPPCVVFPYVKPPQAVVKSMPPDWCLGRSESGWMRGDVFFEYVTNDFNNWLERNNIQKPVLLLVDGHKSHMSLMLSTVCEQMDIILYALPPNTTHILQPADVSVFAPLKASWKNTVRRFLAKPENINTSVTKTNFCKLFADTLQETNLPTCIKNGFKRCGLYPFDPNAPDYTKCVLDTLQNLNSGQTTPGKAISRADVATTKKVLKQLKTALLSKNVNYRALMKELNVFKKTLPVETNVSELSLDTESDYTNSTVQNGSCNSTMQNSSQMSSNSASLTVTDLLKQSEDTQLIQPTPCVIELGTDTVEIIQPPLNVTEDSISLLNITGSYLDVGSVVSLDDILILPLNDTNEVPTPGTLDVCEKLSEIKSPDDQASSAVSTRSIPSAVPKTLTWADTEDLTSSGVVSSADTIKKGAVSSITLVAPETSTYAKTAEHPVTVDQPTPIPMEEDTPSKIVSPTEIALEQEDHIVIQKQIETSSLNDPEKRLQSKIVECPTSTSITASNISDTQKEAEPIVTDPFERHLYLPDHLVKPKKPTKNKIHAAISSAAWREHYEMRDRLKNLKQEETRKRKLERIERQQQAKILKENNSKKKPGSKVKTTQKQNIDYRPRIVRGARKENDVAPTAASGKISCSECDDDLVSDVEENEDKNIGCDACPRWYHLKCTLFQGQSYDDVKDKPYKCNHCDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00035584;
90% Identity: iTF_00035584;
80% Identity: -