Aher011817.1
Basic Information
- Insect
- Agonopterix heracliana
- Gene Symbol
- -
- Assembly
- GCA_963693445.1
- Location
- OY856317.1:15712412-15719648[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-05 0.093 13.1 0.0 19 38 1 20 1 25 0.87 2 2 3.1e-08 5.1e-05 23.6 0.0 4 38 242 276 239 281 0.90
Sequence Information
- Coding Sequence
- ATGAGACAAGCATCAATATGGTTTGGAGTGCCCAGAAGTAGCTTAAATTATAGAATCAAAAATCCGAACGCCAAAGATGGCTACGGTCCTGAACCCGTGTTAACTGCAGCTGAAGAGTCTGCAATAGTGGATTTGATTGTAGATTTAATTAAACGTGGATTTCCGCTGAAGAAGGAGGATATGATATCATGCGTTCAAAATTATTTGGAACATAAACCACGTCGCAACCCCTTTAAAAACAATCGTCCTGGGATCGGTTGGTACCATTGTTTCTTAAGACGTCATCCTTATATCACCGATAGATGCTCTGAGATAGTCACAGCTGCTAATGTACCAGAGCATGAACGAGATGTAAGGTACTGGTTTCAACAAATAGATCGGTATATCGTTCAAGAGAATCTTATGGATGTTATCAATGACCCCAGTAGAGTTTTTACAGCCGATGAGACTTTCTTCAATGTTTGTCCAACATCTGGAGAGGTATCAAAAGAAACCACTAAAAAACCTGTTAGTGGTTTTGAAAAGGATTCGACAAAGGAATTTCTAACTATTATGTTTTCATTCTCGGCTAATGGGACTTCTTGCAAACCAATGATAGTGTATCCTTTCAAGAAATTACCAAATAAAATAGCCAAAAACTTGCCTGAAGGATGGAGCGTAAGCAAGGGCAGCGAGAAGAAAACGAAATTTAAACGAAAATTTGAGCAACAATATTCTAAGGAACTCTTTGAAACTGCCGTCGAATACGTAATCAGTAAAAAATGTTCAATGAGACAGACATCAATATTTTTTGGAGTGCCCAGAGGTAGCATACAATATAGACTCAAAAATCCGAACTCAAATAATATCTTCGGTCCTGATCCCGTGCTAACTGCAGCTGAAGAGTCTGCAATGGTGGATTTGATTGTAGATTTGACTAAACGTGGATTTCCGTTGAAGAGAGATGATATGATGTCATGCGTTCAAGGTTATTTGAAGAATAAACCACGTCGCAACCCTTTTAAAAACAATCGTCCTGGGCCCTGTTGGTATCAACGTTTCTTACGACGTCATCCTTGTATCACCGATAGACGCTCCGAGACAGTCACAGCTGATAATGTACCAGAGCATGAACGAGATGTAAGAACCTGGTTTCAAGAAATAGATCGGTATATCATTCAAGAGAATCTATTGGATGTTATCAATGACCCCAGTAGAGTATTTGCAGCTGATGAGACTTTGTTCAATGTTTGCGCAACATCTATTAAACTATTAAAAGAAACCAGAAACAAACCAGTTACTGGTCTTAAAAAGATCTCAGAAAAGGAATTTCTAACTATTATGTTTTCGTTCTCGGCGAATGGGTCTTCTTGCAAACCAATGATAGTGTATCCGTTTAAGAAATTACCAAATAAAATTGCTAAAAACGTGCCTGAAGGATGGAGCGTAAGCAATAGTGATTCAGGATTGTTGACTACATCCGTTTTTAATGAGTATTTATCTCAAGTTCTGCATCCACAACTTTTAGACGCACATGTAGAATTTCCGGTGATTCTATTTGTGGATGGAAATAAAACGCCTGTGACGATCGAAACAAATGAGCTTTGTCAGCAGTTGCAGATCCATCTCATTGCACTCTATCAGAAATACACAAAAATTGTACAAACTGgCAATATTCCACCGTACGAATATGTGGAATCTACTAAGGGAAACTGCCTCATCGCTATAGAAGGCTACAGGTTTTCCATTAAGAAACATAACCCACCAAGAATCGGTTCGTCTCGGACGGGAAACCCGGTTCTAATCCTCGGAAGGTATCGGTACCACGCAAACAGCAGGTACATTGGCTTCAAGAGAGTTTCCTGGTACTGCAGCAGGAAGAACAGCGGCTGTCGCGCCAAGGCGGTCACCTTCGAGAACGAAATCGTTAAACTTGAAGATGTCCATATGCACTAA
- Protein Sequence
- MRQASIWFGVPRSSLNYRIKNPNAKDGYGPEPVLTAAEESAIVDLIVDLIKRGFPLKKEDMISCVQNYLEHKPRRNPFKNNRPGIGWYHCFLRRHPYITDRCSEIVTAANVPEHERDVRYWFQQIDRYIVQENLMDVINDPSRVFTADETFFNVCPTSGEVSKETTKKPVSGFEKDSTKEFLTIMFSFSANGTSCKPMIVYPFKKLPNKIAKNLPEGWSVSKGSEKKTKFKRKFEQQYSKELFETAVEYVISKKCSMRQTSIFFGVPRGSIQYRLKNPNSNNIFGPDPVLTAAEESAMVDLIVDLTKRGFPLKRDDMMSCVQGYLKNKPRRNPFKNNRPGPCWYQRFLRRHPCITDRRSETVTADNVPEHERDVRTWFQEIDRYIIQENLLDVINDPSRVFAADETLFNVCATSIKLLKETRNKPVTGLKKISEKEFLTIMFSFSANGSSCKPMIVYPFKKLPNKIAKNVPEGWSVSNSDSGLLTTSVFNEYLSQVLHPQLLDAHVEFPVILFVDGNKTPVTIETNELCQQLQIHLIALYQKYTKIVQTGNIPPYEYVESTKGNCLIAIEGYRFSIKKHNPPRIGSSRTGNPVLILGRYRYHANSRYIGFKRVSWYCSRKNSGCRAKAVTFENEIVKLEDVHMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -