Basic Information

Gene Symbol
POL
Assembly
GCA_963693445.1
Location
OY856333.1:8362672-8380502[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.8e-10 8.6e-07 30.0 0.0 3 58 226 279 224 305 0.87
2 3 0.016 36 5.5 0.0 46 89 325 357 321 357 0.73
3 3 4.8 1.1e+04 -2.4 0.0 41 68 2303 2330 2272 2356 0.61

Sequence Information

Coding Sequence
ATGTGGTTAACCAAAATCCCCTCTCTATTCCAGGATGAAGTCCTAGCCCTGAACGAGAAGGTGGTAGTCCGAGCGGAGGACCTGCTGAGCTGGGTGTGTGCGGGGAGCGGGTGGCGGTGCGGGCTGCGGGCGGTGTGGCGCGGGGCCTGCGCCCCCTCCAACTCTGACCTCCACACCGCGCCGCTGCACCACACCCGGCTAGACTTCACCGACGTCGACACTGAGAAGGGGGCTATAGCCCTAGACGCCGACTCGCCAGGCGTGGTGGTCTTCTCCTACCCACGGTACTGCCGCTACCGGGCGCTGGTCTCCAGGCTCGAGGGCATCGAGGCGGCCTGGCTGAGGGACTCGCTCGTCGCCGCGCTGGGAGGGTACGCGGCGAACACCAATAACACCAGGATATTGTACTGTAAGGACACGTTCGAGTATCCAGAGCTTGAAGGTCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTGAAGGGGAGGCCTCGAGGTCGCCGCCGCAGGTTGCCGCGCTCCAGGTCCCGCTCCAGGTCGTCGCGCTCCAGCGACAGCGACGCGCCGCCTCCGCTGCCCAGGGAGCCTAAGAACCCCCGGCGCCTCTCTCTCCGCAACGGCGCCCCGGACAGACGCAGCGAGGAGGAGGACGAGTCCACGCAGACGTCGGAGGACCGCGGCTTCCTCCACCAGCTGAGGCAGTTCTACCGGGACAGGAATGAGCCGTTCAAGATGGCGCACAGCTTGAAGGACTTATCGCTACGAGCACTCTACGAGGGCGTAGCATCACGAGGTGGCTACGAAGCAGTGTGTAGACACAAACTGTGGCGGGTGCTACACGCGGACCGGCCCGCCAGGGTCAGGAGTCACTACGAGAGGCCGTGTGTAGACACAAACTGTGGCGGGTGCTACACGCGGACCGGCCCGCCAGGGTCAGGAGTCACTACGAGAGGTATGTTTGTACAGTGTCGCTACCAGGCCGTGTGTAGACACAAACTGTGGCGGGTGCTACACGCGGACCGGCCCGCCAGGGTCAGGAGTCACTACGAGAGATTCCTCTTACCATTCGAGAACCACGAACGGAGAAACGGATCGAAATATTTCCAGAAACCAAACGGCAAAATCGATTCCGACCCAAAACTAATCGACACGATCGACGTTACAGACTCCCCCCTACGTGAGATACCAAAGCAAGTCAAAATAGAAGACAAAGAAAAACCAGAAAATCTAGAAACGAAACGATTAAGAACACCATCACCTAAAATAGAAGAGAAACACGAAATTAAAGAAGAAATTAACACAACTTCTAAACCAGCAGAAGAACTAAATAGAGAATTCTTAGATTCGTTACCTAACGTAGAAAAACCGTTGAAAATAACCGTTAAACCAGTTGAGAAGTTAATAGAGAAAAACGATAGTAACGTTATAAAGCTGTTTGAGGAGAATAGTGCGTTAATAACGGAGTTAAGCGTTAAATATAACGTTAAAGATGTTAACGTTATAGAAGAGTTGGGGAGGAAGCAGTTGAGTGAGACAAGTTCGGTGTTTTTGGGTGAATTGGCGCAGAGGTTGAATTTGGgAGGACTGTGTAAGTGGAATCTCTGCGACGAGGACTCTGCGAGGAGgatcctgcgaggaggaccgtgtaagtgggattggagtaggatgccgctggtgccAAAGGAGTTAAAGGGAGTCACCACCCGGGCCATGTCGGAAGCGCGGCAGGAAGGTGCGGCTCTTGCAACTGAGGTGCAGCGAACCCCGGAGAGAAGACCTGAgggaggtgaagtgcagcgcactccggagcagaatccaggaaacttcctctatcaaatccAGTGCATGATGGAAGATCAAGCACGCATGATGGAAGAACAGGCTCGCCaccgccaggaggaacaggttCATGAACTGCGCGCAATAAAAGAAGGACAGGCTCGCCAGCAGGAGGAACAGGTTCACGAACTGCGCGCAATAAaagaacaggctcgccgtcaggaagAACAAATGCGCACAATGCAGgagacgcttcataaagatATCACGAAAGGCTTGCAGCAGGCAGTGGAGAGAGTCGAAGCAGTTGAAGGAAGGTTGGATCGTGTGAAGGTTGAGTTAGACCACGTGAAGGATGAGTTCGAAGGGAGGTTTGAGccGATGGAGGTTAATGGTTGGGGCAAGAAGGAGGCGCAGTCCGCGTTGACATTGGCACTTCAGGGACAGGCTCTCACCGTGCTGGAAGCCGTAGGTGCTGGTGAAAATCTGACGTTCGACAAACTCTTCGGAGCTCTGGAAGCTagattcggcgatggacatctcgaacACATGTATCGGGCGCGattgaaggaacgtaaccaacatgcaaatgagagtctgcaacaatggtccgtggaagtagagaagctcgtgcgaaaggctttcCAGTCTTCACCAGGAGCCATCgatgacatgctcctgcaggcctttacggatgggatacgggaTCCGGAGTGCAATATAGATATGAAAAACGGAGTTCTACAGTGTAACACAGAGGAAGTTCCGATGAAAGGTGGTTCATCGGGAAAGGTCTACTGTGTAAGAAGAACAGTTCTCAAGCCTAGATCACAGACCTTGGTACCTGTTGTTTTGCCAAAGAATAACGATGGGAAATTACCACGAAGATGTGctgtcatagaaaaagttaaagCTGAAACTTCTTGGATTCCGGCGAGAACAGTTGTTGGATCCGTTTCATCTACTTCAATCCCTATACTTAACGTTGGTGATGTGGAGCTGACGATTGAGAAGGGGGAGATTGTTGGTCACTGTGAGGAAGTTTTATGGTTACGACAATGTATGGAAAATCCTCCTAAGAAACATAAGGCTGAGGGGGATGTAGTATCGAAAGTTATGGAAGACTCGGgcaaggacctgactaagtTACAGGCTCTGAAAGCGAAAAACTTGCTGCTGCGTTTTTCAGACTTGTTCTCTAAGAACGGCGCAGATATTGGCAGAACAGACTTGGTGAAACACACGATTAATACAGGAGATGTAGCGCCAATCAagcaacgacctaggcgcattccgtttgcCCGTGAGAAGGAAGTGGAGGAAATGATAGAGGACATGAGAACGGGTAATGTCATTGAACCTTCATCGAGTCCCTGGTGTTCACCAGTAGTTCTCGTCAAGAAAAAGGATGGCTCAACAAGATTTTGTGTGGATTATCGGCAGCTTAATGAAGTGACGAAGAAAGACAGCTACCCTTTGCCAAGAATCGACGACACCTTAGACACTTTGAATggaatgaaatggttttcgacgcTCGATCTGAAAAGTGGGTACTGGCAAGTGGACGTAGACCCTAAAGATAAGGAGAAAACCGCGTTCTCTACCGGGAAAGGACTGTGGCAGTTCAAGGTGATGCCGTTTGGATTGTGTAACGCCCCTGCGACTTTCGAGAGATTGATGGAACGTGTCCTTGCTGGAATTCTGGGTGACACGTGTCTGGTTTACCTGGACGACATCATCATTGTTGGTCGAGACTTCGATGATCATCTGAAAAAGTTGGAGAAAGTTTTTGAAAGACTGCGTGGAGCTAATCTCAAGTTGAGTCCAAACAAATGTTCTTTCTTTAAACGGCAAGTCAACTACCTTGGACATGTAATCTCAGAGAGAGGAGTCGAGACTGATCCTGCCAAAACTGCTGCTGTAAGGGAGTGGCCGACCCCGAGAGATAAGACACAAGTTAGAGCTTTCCTTGGGCTCTGTTCTTACTATCGTCGTTTTGTGAAAGGGTTTTCGGACATCGCGAAATCACTACATCGACTTAAGGAAGAGAAGAGGACGTTCGCATGGGATTCAGAGTGTGAAAAGGCTTTTACGGAGTTAAAGGAGCGTCTAAGTGAGGCACCAATTCTTGGATATCCCGACGTTCAAGGAGAATTTGTTGTGGATGCGGACGCCAGTAACATCGGGATTGGAGGTGTGCTCTCACAGCGACATGGTGAGCAGGAAACTGTAATAGCCTACTTCAGTAAGTCATTGTCTAGACCTGAGAGAAACTATTGTGTAACTAGACGAGAATTATTGGCGGTGGTGAAGACTGTACAACACTTCAAGAAATATCTGCTGGGACGTAAATTTTTGGTCAGGACAGACCACGCTGCATTGAAATGGTTACTCCAATTTAAGAACCCGGAGGGTCAAGTTGCAAGATGGTTAGAGCAATTACAGGAATTCAACTTTGAAGTAGAACATCGAAGCGGAAAAGTTCATTCCAATGCAGATGCATTATCAAGGAGACCATGTCCAGAAGATTGTAAGCACTGCAGCAAGCAGGAGGGGAAGGAAACAGTTTTACTCAGGGCTATCAGAACTGATGCCATCAATGATGAGTGGGGAAACGAGGCGATGCGCCTTGAACAGGAAAAGGACTCAGGAGTTGGGCCAATCCTGAACTGGTTAAGGAATGATGATTCTAAGCCTCAGTGGAGTGAGGTGGCAAGGTACGGTGCAGTCACGAAGGGGCTTTGGGCCCAGTGGAAGAGCCTAGTCATACATAATGGATTACTCTGTAGAAAATGGGAGACACCGAATGGCAAAGACTTATATCTACAGTTGGTGGTTCCACGAGCTAAGGTGAAAGAAATTCTGCGAGTTTTTCATGATGGAACTTCCGGAGGGCATTTGGGTGTAAAGAAAACCTTAGAGAAAGTAAAGGAAAGATTTTACTGGTTGCATTGTAAAGACGATGTGGAAGATTGGTGCCGCAAGTGCACGGTCTGTGCAGCTGTAAAGGGACCTCACACGAGGAGCAGGGCagcaatgaaaatttacaatgttggaGCGCCTTGGGAACGAATCGCAATAGACATCGCGGGACCATTTCCAGTCACTAAATCAGGTAACCGGTATATACTTGTGGTAATGGATTACTTCACAAAGTGGCCAGAAGTATTTGCCATTCCAAATCAGGAAGCGATAACTGTGGCCACCAAGTTGGTAAATGACGTTTTCTGCCGGTTCGGGGTTCCGCTGGAAATGCACAGTGATCAGGGCAGAAACTTTGAGTCACAGTTATTCCAGGAAGTTTGCAAGATTTTCGGAATCCATAAGACCCGGACTACTCCTTATCACCCTCAGTCCGACGGCATGGTGGAACGGTTCAATCAAACGTTGGAACGACATCTTGCGAAGGTCGTCGATAGTCATCAGGATAACTGGGATGAGTACATACCCCTTTTCCTGTTAGCCTATCGAACCGCTGTTCATGAGAGTACTTCAGCAACTCCAGCAATAGCAAACTTCGGGAGAGAATTGAAGCTTCCAGCAGATTTGTTATCAGGGTGCGCACCAGGCACTCCTAAGAGTATCAGCGATTATGTGAGCGAACTGCGGGAGAAAATGGTCgacatctatgaacaacttcgGGAAGCAGGTCAAAACGCCAGTGACCGTTCAAAGACACGATATGACCGAAAGGCGAACTATACAGGGTTTGAGGAAGGGACATCAGTTTGGCTGCATAATCCAGTTCCGAGTCCAGAAGTACTAGTCCCCTCGAGCTTACCGCTGCCTCTGACCAGCCTCTCCTCGCTGAGCGACAAATATGTCTCCAACGGACACAACGAACAGACGCAGACGGGCACGCACGTgcacgcgcacgcgcacgcTCGGCCGGCGGGCGCGGGCACGGGGACGGGCGCGGGCACGCTCGCGCGCAGCTCCAGCTCGCTGCGCGCCGTGCGCGTGAAGCCGACGCGCTCGCACGGACGCGCGCACGGACACACCCCGCCGATCCCCCCGCTGCGGCCGGACTCCGCCTCCTCGTCGCCCCCCACGAGTGGGGCGCCCCCCCTCACGCCCGTCACCAACTTCGGCATACACCACCCGCCCAGCACCGCCAGCCACAGCGACGACGAGATCGTTGAGGTACCCTACAAGCCAAAAACACCAGAAATAATCGACCTAGACGAATACCCGGAAAGTCCGCAATCCGTCAAGAAGAAAAAACTAGACATCCTCAAAGAGAGAGGCCTAGAAGTCACCGCCATAGCCCCAGCATGGGGCACACCCCCCCTAACACCCCTAATAAACCCCCCCATGATCCTAAACCCAGCCATGCAACACCAAATAATGACCCAAGCATCTCTATTCCAAATGTACAACATTATACCCCAGAATTACGCAAATGGAATTCAACCGCCCAAAGTAATCCAGGCGACATGCATTTACGGGTCATCGGGACCAGAAAAAACTGTCTATGGCAACCCCAAAGACCCATTCATGCCTCCCCCCCATATCCTCCATGGCACCCCTGTTAAACCCCAAAGAGTTGTCACAACAACTCAAGAACAACCGAGGCAAGATGTCTTAGATTTGACTTGCAAAACTAGCACTGCGCCAAGTCAAAAACCGGCTGTTGAAATCGTTAGAATCCCTTCATCTTCTCCTTCGAAATCGGCACAAAATTTAACAAAGAATTACACTCTAATCGACGGTAAAGCTGTCGTTGGATCAAATTTAGAGATCACCTTAGTCAATCCAAAAATGCAGACTCCTCCGAAAAATAGGCCGGTGCAAAAAAGGTCTTCGAATGGCAAATTTATGTCTACAAAAACGCCCACCCCTCCTAAAGATTACCCAAGACCGTATCCATCCCCATCCAGCGTTAATCTGacgccaaaaaaatctgctatcaaTGTACCAAACTATCAAATTAGGGACGATGTATCTCCGACGAGTTCCACCGGCTCCAGAGATTCTCAAACTAATATTTATAAAGGACAAAATTACACGCAAATAGAACACAAAACGCCAAATTTGGCACAAATAATGGACATGCAAAAAGGTCCGTCTTTAGCACAAATTATGGACATGCAGAAAAGTCAGAATTTAGCGCAAATTATGGATATGCAGAAAAGTCAGAATTTTGCGCAAATTATGGACATGCAGAAGAGTCAGAATTTTGCACAGATTATGGATATGCAGAAGAACCAAAATCTCGCTCAAATGATGGACAAACCATCGTTGCCTCCATTCATGGACCCGGCGTATTTGAGCGCTTTGTACAGTTTTAGTCAAATGGACCAACGACACGTGGCcatgtataataattttatggcCCACAGAAGTTATTCCAGCCCTTTGGGCGGAGTCGCTACGCCTACAACgaaaaattaa
Protein Sequence
MWLTKIPSLFQDEVLALNEKVVVRAEDLLSWVCAGSGWRCGLRAVWRGACAPSNSDLHTAPLHHTRLDFTDVDTEKGAIALDADSPGVVVFSYPRYCRYRALVSRLEGIEAAWLRDSLVAALGGYAANTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRLPRSRSRSRSSRSSDSDAPPPLPREPKNPRRLSLRNGAPDRRSEEEDESTQTSEDRGFLHQLRQFYRDRNEPFKMAHSLKDLSLRALYEGVASRGGYEAVCRHKLWRVLHADRPARVRSHYERPCVDTNCGGCYTRTGPPGSGVTTRGMFVQCRYQAVCRHKLWRVLHADRPARVRSHYERFLLPFENHERRNGSKYFQKPNGKIDSDPKLIDTIDVTDSPLREIPKQVKIEDKEKPENLETKRLRTPSPKIEEKHEIKEEINTTSKPAEELNREFLDSLPNVEKPLKITVKPVEKLIEKNDSNVIKLFEENSALITELSVKYNVKDVNVIEELGRKQLSETSSVFLGELAQRLNLGGLCKWNLCDEDSARRILRGGPCKWDWSRMPLVPKELKGVTTRAMSEARQEGAALATEVQRTPERRPEGGEVQRTPEQNPGNFLYQIQCMMEDQARMMEEQARHRQEEQVHELRAIKEGQARQQEEQVHELRAIKEQARRQEEQMRTMQETLHKDITKGLQQAVERVEAVEGRLDRVKVELDHVKDEFEGRFEPMEVNGWGKKEAQSALTLALQGQALTVLEAVGAGENLTFDKLFGALEARFGDGHLEHMYRARLKERNQHANESLQQWSVEVEKLVRKAFQSSPGAIDDMLLQAFTDGIRDPECNIDMKNGVLQCNTEEVPMKGGSSGKVYCVRRTVLKPRSQTLVPVVLPKNNDGKLPRRCAVIEKVKAETSWIPARTVVGSVSSTSIPILNVGDVELTIEKGEIVGHCEEVLWLRQCMENPPKKHKAEGDVVSKVMEDSGKDLTKLQALKAKNLLLRFSDLFSKNGADIGRTDLVKHTINTGDVAPIKQRPRRIPFAREKEVEEMIEDMRTGNVIEPSSSPWCSPVVLVKKKDGSTRFCVDYRQLNEVTKKDSYPLPRIDDTLDTLNGMKWFSTLDLKSGYWQVDVDPKDKEKTAFSTGKGLWQFKVMPFGLCNAPATFERLMERVLAGILGDTCLVYLDDIIIVGRDFDDHLKKLEKVFERLRGANLKLSPNKCSFFKRQVNYLGHVISERGVETDPAKTAAVREWPTPRDKTQVRAFLGLCSYYRRFVKGFSDIAKSLHRLKEEKRTFAWDSECEKAFTELKERLSEAPILGYPDVQGEFVVDADASNIGIGGVLSQRHGEQETVIAYFSKSLSRPERNYCVTRRELLAVVKTVQHFKKYLLGRKFLVRTDHAALKWLLQFKNPEGQVARWLEQLQEFNFEVEHRSGKVHSNADALSRRPCPEDCKHCSKQEGKETVLLRAIRTDAINDEWGNEAMRLEQEKDSGVGPILNWLRNDDSKPQWSEVARYGAVTKGLWAQWKSLVIHNGLLCRKWETPNGKDLYLQLVVPRAKVKEILRVFHDGTSGGHLGVKKTLEKVKERFYWLHCKDDVEDWCRKCTVCAAVKGPHTRSRAAMKIYNVGAPWERIAIDIAGPFPVTKSGNRYILVVMDYFTKWPEVFAIPNQEAITVATKLVNDVFCRFGVPLEMHSDQGRNFESQLFQEVCKIFGIHKTRTTPYHPQSDGMVERFNQTLERHLAKVVDSHQDNWDEYIPLFLLAYRTAVHESTSATPAIANFGRELKLPADLLSGCAPGTPKSISDYVSELREKMVDIYEQLREAGQNASDRSKTRYDRKANYTGFEEGTSVWLHNPVPSPEVLVPSSLPLPLTSLSSLSDKYVSNGHNEQTQTGTHVHAHAHARPAGAGTGTGAGTLARSSSSLRAVRVKPTRSHGRAHGHTPPIPPLRPDSASSSPPTSGAPPLTPVTNFGIHHPPSTASHSDDEIVEVPYKPKTPEIIDLDEYPESPQSVKKKKLDILKERGLEVTAIAPAWGTPPLTPLINPPMILNPAMQHQIMTQASLFQMYNIIPQNYANGIQPPKVIQATCIYGSSGPEKTVYGNPKDPFMPPPHILHGTPVKPQRVVTTTQEQPRQDVLDLTCKTSTAPSQKPAVEIVRIPSSSPSKSAQNLTKNYTLIDGKAVVGSNLEITLVNPKMQTPPKNRPVQKRSSNGKFMSTKTPTPPKDYPRPYPSPSSVNLTPKKSAINVPNYQIRDDVSPTSSTGSRDSQTNIYKGQNYTQIEHKTPNLAQIMDMQKGPSLAQIMDMQKSQNLAQIMDMQKSQNFAQIMDMQKSQNFAQIMDMQKNQNLAQMMDKPSLPPFMDPAYLSALYSFSQMDQRHVAMYNNFMAHRSYSSPLGGVATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-