Basic Information

Gene Symbol
zfy1
Assembly
GCA_963924505.1
Location
OZ004688.1:6470513-6493364[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.00058 0.037 14.9 6.5 1 23 293 315 293 315 0.99
2 10 0.88 56 4.9 10.2 3 23 324 344 322 344 0.96
3 10 0.0011 0.073 14.0 2.2 1 23 378 400 378 400 0.97
4 10 5.2e-06 0.00034 21.4 1.5 2 23 405 426 404 426 0.96
5 10 0.0071 0.46 11.5 0.3 1 23 432 454 432 454 0.97
6 10 0.027 1.7 9.7 2.0 2 21 461 480 460 485 0.93
7 10 0.0027 0.18 12.8 0.1 1 22 493 514 493 516 0.88
8 10 0.6 38 5.5 0.3 2 23 523 547 522 547 0.93
9 10 8.3e-06 0.00054 20.7 3.4 1 23 556 578 556 578 0.98
10 10 0.17 11 7.2 0.9 1 23 584 607 584 607 0.91

Sequence Information

Coding Sequence
ATGGATTTAGAATTGAACCATGTTCCTCCTGGTTCCATCTGTGAAGGTTGTTTGAGTGTAGATCGAAAGCTTACCACTGTATTAGAAGACGAAAGCCGAAAGTTCTTCATCGAAATTTTGGACCCATTGGACCATGTCAATCATCCATTATCGTTGTGCTGGGAGTGTACAATGATGCTAAAACGAGTATCCAAGTTTAGGATGCAAGTTAGAGAGGCCCATGATTTGCTTGTCAAATATATGCTTCACCAAATAACTCATCTCAACACTCTATCACATTTAATACAAACTAAATCAAAACATGAATGTTATCCGAACAAGCTGAGCAACTCTACACTAAACAACGTTCTACCCACAAACTCAAGTGATGAATCTCAAACCTTGTTCGTTAAAATAGAAGACGATGATTTTGGTGATCTAGTAGGGTTTTATGTTGACGATTTAGGAGAAAATGATGAAGACAATAAAGATTTTCAGACAGATGTCAAAACAGATCCCTTCCAATATGAAGTGCCTATAGCTAATGGAACTAAaccgaaaaataagaaaattaaaagtaaaactaaagTGGAATTTGATGACTCCGACGATGAACCTCTTACATTGAAGAAACAGAAAGAGACAGAAGATAAGACGTACAAGCGAAGAGGGAGAAGGAAAAAGGGTGAAGATATTGGTCCCAAGATAGACAAACGTAGGCACCCGGCCCCGAAGCGGGAGAAGCCGTCAGGGGTGATAAACAACCCGCGGGTGCGAAGAAAGTTGGAAAAACTGAACATGGATGCAGGACAGCTCGAGATGGTCGTGCTGAGCTGGGACGAGGTAGAATTGGAGCGGCAGAGGGCGCTGACCAGCGAGGCGTTCACCCGACACCAGTATAGATGTCACGACTGCGCGCTCGGGTTCAACCACAAGTTCAAACTGACCAATCACATGAAGAAACATGATCCGTCTATGGGCGCGTCATGTTGCAGCGTGTGTAGAGTGCGATGCAGGGACAAGCATGCGCTGTGTGCTCACCGCCGGAGACATCGCGTCAGATGGAGGTGTAGGCTGTGTGGGGGGGCGTGGTCGCGGGCTGCCGTGGCGGCAGACCACGTATCGCGAGCCCACGGAGCCGCACCGCCTCACCACGTGTGTCCCACCTGCGGACACACTGCCACGACGTTGGGTAAACTCCGCAACCATCTGAAGAACCACGCCGAGAGACAAAAGTGTGAACTGTGTGGGAAGACCTTTAGGGACAGGACCTCCCTGAGGACACATCTATTTATCCACAAGGGAGAGAAGGAATACGCGTGTCCCTCGTGCGACAAGAAGTTCCTCTTCAAGAAGGCCATGGAGGTGCATATGGTCACACACGACGCCTCCGCCCAACTCTACTGTTATCagtgCGACATGAACTTCAAGAACAGAATGTCTTACTATCAGCATATGAAATATAATCTGAAGCACATCGATCCCGCCAAGTTAAAGTACGCATGTCCCCTATGTGACAAACGCTTCGCCAAGGCGACTAGACTCGAGGAGCACAACTTAGCCGTTCATCTCAAATCTACACCCATACAGTGCACCGTGCCGGGTTGCAGCTTCGCTTGCTCGTCTCGGCCGGTGCTGCGCGCTCACAACCGCTCCGTGCACAGGAACACGCGCGCGAACAGGAATCACGTCTGTCATACCTGCGGGAAAGCCTACACGACTAAGAAGACTCTAGAAGGTCACATAAGGTCCCACACCGGCGAGCGACCGTTCCTCTGCAAGCACTGCCCCTCCACATTCGGCTACGAGGCCGCGTTATACAACCATAACAAATTGGTACACCTCAAACCTAAGACGGGTCGTACGCGCCCCCCGCCCGCACCACCTGCGCCGGCGCCGCTCTGGCAACTCTCTATCAACCCTCCGTCACAACCCGTACATAACACACTCACTAGTGATCACATTAGCTGA
Protein Sequence
MDLELNHVPPGSICEGCLSVDRKLTTVLEDESRKFFIEILDPLDHVNHPLSLCWECTMMLKRVSKFRMQVREAHDLLVKYMLHQITHLNTLSHLIQTKSKHECYPNKLSNSTLNNVLPTNSSDESQTLFVKIEDDDFGDLVGFYVDDLGENDEDNKDFQTDVKTDPFQYEVPIANGTKPKNKKIKSKTKVEFDDSDDEPLTLKKQKETEDKTYKRRGRRKKGEDIGPKIDKRRHPAPKREKPSGVINNPRVRRKLEKLNMDAGQLEMVVLSWDEVELERQRALTSEAFTRHQYRCHDCALGFNHKFKLTNHMKKHDPSMGASCCSVCRVRCRDKHALCAHRRRHRVRWRCRLCGGAWSRAAVAADHVSRAHGAAPPHHVCPTCGHTATTLGKLRNHLKNHAERQKCELCGKTFRDRTSLRTHLFIHKGEKEYACPSCDKKFLFKKAMEVHMVTHDASAQLYCYQCDMNFKNRMSYYQHMKYNLKHIDPAKLKYACPLCDKRFAKATRLEEHNLAVHLKSTPIQCTVPGCSFACSSRPVLRAHNRSVHRNTRANRNHVCHTCGKAYTTKKTLEGHIRSHTGERPFLCKHCPSTFGYEAALYNHNKLVHLKPKTGRTRPPPAPPAPAPLWQLSINPPSQPVHNTLTSDHIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00028208;
90% Identity
-
80% Identity
-