Aals021773.1
Basic Information
- Insect
- Agonopterix alstromeriana
- Gene Symbol
- Zfy2
- Assembly
- GCA_963924505.1
- Location
- OZ004689.1:535577-538445[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0055 0.35 11.9 4.0 2 21 112 131 111 132 0.93 2 18 0.2 13 7.0 0.1 3 22 138 156 137 158 0.87 3 18 0.0015 0.099 13.6 0.4 2 23 164 185 163 185 0.97 4 18 0.0046 0.3 12.1 0.1 2 23 191 212 191 212 0.90 5 18 1.8 1.2e+02 3.9 8.9 1 21 215 235 215 236 0.90 6 18 0.0053 0.34 11.9 1.1 1 23 252 275 252 275 0.94 7 18 0.00019 0.012 16.5 0.9 1 23 281 303 281 303 0.98 8 18 1.1 72 4.6 2.4 1 23 337 360 337 360 0.93 9 18 0.11 7.4 7.7 1.0 2 21 489 508 488 509 0.92 10 18 9.9 6.4e+02 1.6 0.0 3 23 516 537 515 537 0.92 11 18 0.0089 0.58 11.2 0.2 1 23 542 565 542 565 0.95 12 18 6.3e-05 0.0041 18.0 0.0 2 23 571 592 570 592 0.96 13 18 1.2 78 4.5 2.3 2 20 596 614 596 616 0.92 14 18 3.6e-05 0.0023 18.7 2.7 1 23 642 665 642 665 0.95 15 18 0.00015 0.0094 16.8 0.5 1 23 671 693 671 693 0.97 16 18 0.2 13 6.9 0.1 1 23 699 721 699 721 0.97 17 18 0.0034 0.22 12.5 0.3 1 23 727 750 727 750 0.94 18 18 0.0062 0.4 11.7 0.8 2 23 757 779 756 779 0.94
Sequence Information
- Coding Sequence
- ATGGATGCGTCGTTTCAGGTGGCGGATGAGCCCGGCTTGCCGTCGGGGGTCTGCTACGCGTGCTTCGAGGCCACGATCTCATCCATTCAGTTCCGAGAGCTCTGCATCGACTCTCTCCACCACTGGACCAGAGCAGTCACTAACCTCGCACAAATCCCTCCACCCGTTGAAGAAGATAAAACCTACTACATTTTCTACAACGGAGGCGATGATATTATCATCAGAGACCAAGACATTCAAGCGTGTAATACTAATGCAGCTCTCGAAAGATTAAATGCTCCGAAAGtagtaaagaaaaaaacaataaaacgaaAAGGACGGATCAGGACATGTAGTTGCCAGGATTGTGGTAAAAATTTCAAGATGCCGTGTCAATTGGACAAGCATTTAAAGAATTCAATGAAACGCGCTTGCTGGGATTGCGGTGCTGTCTTTAGCAAAGATTTGTTGGTGTACCACTTGTTTGACGAACATAACAAATCATTCGTCAGCTGTCATGTTTGCCACGAGATCTACAACGATACTGCAGCCTTGTATGCACATATTCTGACACACCAATATAAGAGCAACACGTGCAAGATTTGTGGCTTAGGATTCGCTAGCGAGAGGGCTCTACGCGCCCATTCTTACGCTCATTCTCTATTCCACTGCTCTTACTGCGACAAAAGCTTCGAGAACCGTCGCTGTCACAAACACCATCTAAAACAGTGCAGTAGAAAAACTGCGGCACGTCCAAAAGAGACTGCACAGATCTTTATCTGCGACCACTGCGGATCCAAATACGACAAAAAGCCTTCCTTGCGCATTCATATTATACAAAAACACCTAAACGTCCTCCCCTACGTTTGTGAAACGTGCGGGAAACGTGCTTCGACTCTAGCGCATCTGCGCTCACACGAAACTACCCACACAACTGAACGGAAAGTGTTCCAGTGTCAATGCGGTGCTCGGATGCGAACCGAGTTAGGATATCAGTTACATTTACGAATTCATAGCGGGGAAAAACCTTATCAGTGTGATGAGTGTGGCGATTGCTTCCTGTCGTCTTCTAGAAGATTAGACCACATTAAAAGGAAGCATAGACGTACAAGGGATATGCCTCATGGGTGCAAGGAGTGTTCTGCGCGTTTCCTGCACGACGAACCCTTCTGCCCCCCAGGCGCCTGCCTCTCCTGCACCAGCGCCGTCATCGCCGCCCAAGAGTTCAAACTCCTCGTCAAAAACTCTATACTCCTTTGGACGAAAGCCGTCGACTCCCTAACCACGCTTCCTGACCACTACACCCCCCCTATCAAATCCCTTTGCGCCTTCATTCGAGAGGACAACCTAACTTTACAAACTGTTAAAGATTACTCAGGAAACGATCCAAAAACTATACTGAACCGCCTTACAACAAAAGTATCCCCCAAAAAGAAAGATTCTACGGAGAAAAAGCCGAGGTTAGCAAGAACAGGACCTCCTTGCAATTGCACAGATTGCGGACAACAATTCCTAAGCCCCTATTATCTAAgtttacatttgaaaaacagCGGGCAGAAGGAAGCTTGCCTTCTCTGTGGAACCATCGTTATACGCGGACAAGAAATGAAAGATCACTTAGCCATAGTTCATAGAGAAATAGCTTACTTATGCAACAGTTGTCCAGCGTTGTTTAATCGGGAAATAGATTTGAAGAAACATTTGAAATCTGCTCATAGACCAGGGGCTTTGACCTGCGGAGATTGTGGCAGAAGCTTCCCACGCGCTGGGGCATTCGAAGCACATTCGCAAATGCACGCTGTAAGGACCTGTCGAGCCTGCGGTAGCCAATTCACCAACCGTGGTTGCTACAGACGCCACAGGTCCCAATGCGAACCTGAGGCGAGACCAGACATGCAAAATATACCCCGAAGTAGACGCTCCAACATCCGTGATCCTGCAACTTTTACCTGTGATCACTGCGGCAAGACCTACCACTCTCGTCCTCAACTCAAAAACCATATTCTCTGGATACACATGGATGTACGTCCACACCAATGCCAATGGTGTGGGAAACGATTCTACACGCCAGCTCGTTTAGCGGAGCACACCATCGTGCATACGCGGGAACGAAACTTCGAATGCGATCTTTGCGGGGTTAAACTGGTCTCCAAAATGGCCGCTGTGTACCACAGGCGACGTCACACTGGAGAAAAGCCTTACGAGTGCGAGGATTGTGGGGAAAGATTCATTTCTGCGTCCCGTAGGTCCGAGCATGCGAAGAGAAGGCATTTCAAAGGGGTCAGGCTGAGTTGTAGTCAATGTTCCGCTACTTTCGTCAGGGGACATGAGTTGAGGAAGCACGTGGAAAAGGCGCACGCTGTTCTACAAGACCCGCTATTGGTTAGACTTAATAATTAA
- Protein Sequence
- MDASFQVADEPGLPSGVCYACFEATISSIQFRELCIDSLHHWTRAVTNLAQIPPPVEEDKTYYIFYNGGDDIIIRDQDIQACNTNAALERLNAPKVVKKKTIKRKGRIRTCSCQDCGKNFKMPCQLDKHLKNSMKRACWDCGAVFSKDLLVYHLFDEHNKSFVSCHVCHEIYNDTAALYAHILTHQYKSNTCKICGLGFASERALRAHSYAHSLFHCSYCDKSFENRRCHKHHLKQCSRKTAARPKETAQIFICDHCGSKYDKKPSLRIHIIQKHLNVLPYVCETCGKRASTLAHLRSHETTHTTERKVFQCQCGARMRTELGYQLHLRIHSGEKPYQCDECGDCFLSSSRRLDHIKRKHRRTRDMPHGCKECSARFLHDEPFCPPGACLSCTSAVIAAQEFKLLVKNSILLWTKAVDSLTTLPDHYTPPIKSLCAFIREDNLTLQTVKDYSGNDPKTILNRLTTKVSPKKKDSTEKKPRLARTGPPCNCTDCGQQFLSPYYLSLHLKNSGQKEACLLCGTIVIRGQEMKDHLAIVHREIAYLCNSCPALFNREIDLKKHLKSAHRPGALTCGDCGRSFPRAGAFEAHSQMHAVRTCRACGSQFTNRGCYRRHRSQCEPEARPDMQNIPRSRRSNIRDPATFTCDHCGKTYHSRPQLKNHILWIHMDVRPHQCQWCGKRFYTPARLAEHTIVHTRERNFECDLCGVKLVSKMAAVYHRRRHTGEKPYECEDCGERFISASRRSEHAKRRHFKGVRLSCSQCSATFVRGHELRKHVEKAHAVLQDPLLVRLNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00028044;
- 90% Identity
- iTF_00028044;
- 80% Identity
- -