Aals021039.1
Basic Information
- Insect
- Agonopterix alstromeriana
- Gene Symbol
- -
- Assembly
- GCA_963924505.1
- Location
- OZ004687.1:6569746-6609682[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.74 48 5.2 0.1 2 23 497 518 496 518 0.89 2 17 0.016 1 10.4 0.1 1 23 528 551 528 551 0.95 3 17 0.94 61 4.8 3.5 1 21 675 695 675 696 0.93 4 17 0.048 3.1 8.9 3.8 2 23 759 780 758 780 0.95 5 17 7.9e-05 0.0051 17.7 0.2 2 23 823 846 822 846 0.97 6 17 0.049 3.2 8.9 0.2 1 23 852 874 852 874 0.93 7 17 0.0052 0.34 11.9 3.2 1 23 880 902 880 902 0.98 8 17 0.062 4 8.5 0.0 2 20 913 931 912 933 0.92 9 17 0.067 4.3 8.4 0.2 1 23 1010 1032 1010 1032 0.96 10 17 2.8 1.8e+02 3.4 7.2 1 23 1039 1061 1039 1061 0.95 11 17 0.0019 0.12 13.3 1.8 1 23 1101 1124 1101 1124 0.95 12 17 0.0086 0.56 11.3 0.2 1 23 1131 1154 1131 1154 0.96 13 17 0.0052 0.33 12.0 0.2 2 23 1177 1199 1176 1199 0.96 14 17 0.00073 0.047 14.6 0.5 3 23 1237 1258 1236 1258 0.95 15 17 6.4e-05 0.0041 18.0 0.9 1 23 1300 1322 1300 1322 0.96 16 17 0.00016 0.011 16.7 0.1 1 23 1328 1350 1328 1350 0.97 17 17 0.00076 0.049 14.6 0.6 3 23 1358 1379 1356 1379 0.95
Sequence Information
- Coding Sequence
- ATGGAGGAGCAAACTCCACTAATTCTTTGCATGGAGAACTCGCACGGTGAAGACGTAGCGTTGAGGATTGAGCCCGGAGATGACTTCCAGACGTTCCTGATCAAAGCCAAAACCCTCCTAGGCTTCGACGTAGACATTAACTCTATAACACGAAACCAACCGGTCTCCCTTACCGACAACATTTACCAATTCCTAATAAACTCTGAACACAACGTCACCACTGAACTTATAACTGAAAATTTTCGACAAATTCTTGAACCTAACAATGCTGAAGGCGACTTAGTTTATATGTTGGATGACGGTACTCAAATACGCGCTTCACAGATACATTTTGACAATGAAGATCCGCCCGTTGACTTAACAGCCGAGAAAATACCTTTCGTCAAATACACTGATGATGCCGAAGAAGAATTTGATAATATACAGGCTGATACTCAAGTGTACAACATTGTTGATAGTCCCGTATCAAGAATAACAGCTAAAAATACCAGTCCCAAATGCAGTTTTGCCAACAGCCTTCCTTTTAGATTAGTCTGCAATAACACTTCTGGTTTCGAAGCGCAGTTCACCAAATACTTAGAAGCTAACAATGCTAATACTTACGCAACTTTGAACCCTGTTGCTAATAGAAATAAGTCACCGAGAAGTTTGATTAAGgataattataaaacttatgACGAAAACTTTCAATCACACAGAAATAATGATGATTTCACTCATTACACTAGAGAAGAAATACTTAATATGTTCAAAGATTCGCCTGTGACCTCTCTGCCGTATGATAATCCAAGTTTTCCTGAAAAACGAAAGCATGTACGCAAAACTGATCCTTCCAGAATCGTCCATAAAAACTGGAATTCTAAACCCATATCTTTCGTCAACGTAGATGGAGTCTTAATAGCTGAATCTGAGAGTCAAAATTGCTTCATTTGCGACAAATACGTCGACAATAATATGGAGAAACTTTACTTGTTTGACAACGAAGATCAAAGGTTACACAGGTTGTCtccgcaaaaaaaattatctacgcAATTGAAAATTATATGCGAGCTATGTTTAGAAGACAATTTCCGCCCCTGTCGCATGAAAAGTCCAAACCAATCACTAAATTCTGATGAATATTTAGTCATACGCAACAACCAACAATACATCTTCCAAAAAACCAATGCTTTAACCTTCAAAAGTGGTTACGGGAACTATAGTAAAGCTAAAATTGATTTAGAAACGAGTTTAAACGGAAAACAAGAGTTTGTTAAAGTAGAAATAGGTTCGGATGGTGAGATAGTAACTAAGCCTATAGACGCCGACATGACAAATGACGTCATCGAAGTAAAAGATGAGGAAAAGGAAAGTTCCAGCGATGTAGAGATAGTGGAAAATGGACCTGAAGTAGATGAGAATATAGTGGATAATTTAgaagaagctgatgatgatgttatagAGTTTTTAGGGAAATATCAGTGTGATGAGATCGAGTTGAAGGTGCTTAAATGCAGGTTCTGTGAGCGAATATTCTCAGATCTACAAGAAGTTATAGATCACGGAGAGGAGCACAAACACGATATGGACGAAGGGGACGTATTCCCCTGTCCCCTCTGTAACTATGGTTATGCTAACTTCAAATGGTTGAAGGGACATCTGAAGGCTGCTCACGATAAGACTGCTATCAAGGATGAAGTCAATGTTCATGACAAAGAGAGTGTAAGAGCTGAAGTTAAGGACGATATCGAGAAAGATAAAGAGGACAAACAAGACTCCCCAAAAATAACTTCACCTATTGCGAAGCGAACAAGGAGTGCTGTCAAAAAGTGTGAGACAAATGATGGTGATTATGATGATACTttttgggagtcacgttgcaggAATGACTTTGTAATAAAAACGGAGGTGAAACAAGAATGTCTGGACAGTAGCGACGACGAAATATGGATAGTACAGACAGCGGACGACGAGGGCGACCAACAGTTGCAGCACTTATTGTTGGCTGATCAGaacGGGCAAGATCAAAATGAAGATAAGAAACACAAGTGTGATAATTGCGGGCAGCAGTTCCTATCAAGGGAAGGTTTAAAAAGTCATAAATGTAAACGTACAGGCAGGAAGCGGAAGTCGTTGGTTAAGGACGAGGCGGTCATCTATGTCCCTACTCAAGAGGATTTTATAAAGaGAGCCCAAGGAAGACCAAGGCAAGTGGATGTTGGAGACAAAGATCTGCTGCCTgcgAGGACCCGCAAGAAGAAGACCAAGGAGCCGTCCTCCGACCCCCAGACGGTCACCTGTCACAACTGCAACGAATCTTTCACCTCCAAAGTACGACTCAAGTTTCACATGCAATTCCACGAGACGACTAGCATGCTGACAGAGGACGGGGAATACACGTGCACCGAATGCACCAATGCTGTGTTCCAGACAGAGACAGAGCTATTCGACCACGTTCACTTCCAACACCACAAGCAGACCCGCTGGCAGTGCCCTGTAGCGGGCTGCGGCAAGACCTTCTACCTGAgAGCAACACTGACGAAGCACAGCCGCACACACACAGGCACGCGCCGCTACGTGTGCGGCACTTGCGGCAAACGGTTCCTGGACAAACAGACGCTAGACGAGCACGGGGTCACACACTTACAGATAAAACCCTTCCAATGCCACGTCTGCCTCAAGCAACTAACACGTCGTTCTCGCCTCCGCATGCACTTACGAGCTCACGAAGAAGAATTACGTCCCAGACATGTTCTTGTGTGTGCCATATGCGAGCGGGCCTTCAGAGACGCCAACGATGTACAGGAGCACCTGACCCGATCGCCGGAGTGTATAGACGATTTCGCGAACCAGCTGAAGGATGAGCAAGCCGTCACGGTGCAGCTATCGCCCACTAGTGGGCTTGTGAGTCAGGCAGTGGTCATAGaatCATCAAAACTATCTCGACCTATACGCGCGCAAGTGGACGGGGCTATAGCTGACTCTCTCCTATCGCAAGTGTCAGACGAGGCGCGCGCTATTGTGCGGGTCGTTGAGATAGAGAAGGCTTTCCGATGCGAGTTCTGCGAGGATGTGTTCTATTCTGAGGACGGACTGAACAACCACCGAGTTATTCACAAGAACGTAAAAAACCCGTTCACGTGCCATATTTGTAAAGTCAGCTTCGCTACTTATTCCAGATGTACAACTCATAAGACGACCCACGGTTTCTACAAGCGCCCCCTGGCGGACGCCAAGAAGCAGGCCAGCAAGGAAACACACGAGGCAGGCCCTTCAGCCACCGGGATCCTAGGCTATGGCGACTTTCCCGTCGTCAAACACTTCCTGTGCGAGGATTGCGGCAGGTCCTACCTGCACTGGACGTACCTGCAGGTGCATCGGCGGATGAAGCACGCGCAGGACAACTTCGTGTTCGAATGCAACCAGTGCGGGATGAACTTCCCTAATAGTTGGAGTGCAGCGTACCACAGAAAGAAGGCCCATGTGAAGTTAGAGCAGGACGACGCTACCAGCACAAGGACTGTGAAAGAGAAGGAAGACTATAAgaTACCATGTCGTGATTGCGACGAAGTTTTGCCAAACAAAACTGCTCTCTATAAGCATAGGAAGAAGGAACACAGTGATGCGTCTCTCCGTGCCCATGTTACTGACACTATTAACAATATTAAACCTGGTATATCGACGGAGGTGTTTAGGGCCCGTTCCCCGCAGCGCGCGGCGCGGCCCGCTTGCGCCAAGTGTGGACGCAGCTTCGACGACCTGCATCTGCTGAGGGAGCATCTCAAAGAAGTTCACTCTCAGTCGGATACAGGCCCGTTCCTGCCGCTAGTGGCGACGTCACAGTCACACACACAGACGCACGCACAGTCACGCACACAGGCGCACGCGtacgcacgcacacagacgcaCGCGCGTGCGCACGCATGCGCGGTGTGTGGACACGCGTTCCGCACTCTATCCATGCTGAACGAACATCTCAGgatTCATACAGGCGAGAGACCGTTTCCATGTGATGTGTGCGGAGTCGCGTTTAGACGATCAACGGCGATGCGCAACCACCGTCTGATCCACACGGGCGTCAGAGCGTGGGcctgcgcgcgctgccccaAGCGCTTCCGCATCCGCTCCGACCTGCGCACCCATCTGCGGCTGAAGCACCCCGCACATCTAGCCGTCATTGAGGTGTTAGGGCTGAACCCGAGTCCTGAAGAAGTGATGGAACATCTGAACCTCAACAATATTCCTCACGACAAAGTCATAGAGATCACCAAGATATCTTTCACTAAGGGCTCAACAAGCATTGTACCGGACAGTTCCCGAGCACTATCGGCCTTATCGGACGTACCGCGCACTCAGGTCGCCTGCAGCCGTTTGCGTCCTGAACGAACATTTTCAGTGGATGAGTTTCAGCCATCGCGACGAGGTCGTGGAATAGCCAAGAACCCTCGCAGACCCAAGATCCTGCAGCGTGGAGTCCCAACTCCTAGTGTGGACCCCACTGTCTACCCCGTAGCTCTCAGCGTCGGAGAGCAAGAGCTATCAGAGTTGAACGTGCAGATGTTACTGCGTGACGGAATGCTGGTCAACGGCAACCAGTTGGTGCAGCTCCAGCTCAGCGACTCCATGATGCTGGAGTGA
- Protein Sequence
- MEEQTPLILCMENSHGEDVALRIEPGDDFQTFLIKAKTLLGFDVDINSITRNQPVSLTDNIYQFLINSEHNVTTELITENFRQILEPNNAEGDLVYMLDDGTQIRASQIHFDNEDPPVDLTAEKIPFVKYTDDAEEEFDNIQADTQVYNIVDSPVSRITAKNTSPKCSFANSLPFRLVCNNTSGFEAQFTKYLEANNANTYATLNPVANRNKSPRSLIKDNYKTYDENFQSHRNNDDFTHYTREEILNMFKDSPVTSLPYDNPSFPEKRKHVRKTDPSRIVHKNWNSKPISFVNVDGVLIAESESQNCFICDKYVDNNMEKLYLFDNEDQRLHRLSPQKKLSTQLKIICELCLEDNFRPCRMKSPNQSLNSDEYLVIRNNQQYIFQKTNALTFKSGYGNYSKAKIDLETSLNGKQEFVKVEIGSDGEIVTKPIDADMTNDVIEVKDEEKESSSDVEIVENGPEVDENIVDNLEEADDDVIEFLGKYQCDEIELKVLKCRFCERIFSDLQEVIDHGEEHKHDMDEGDVFPCPLCNYGYANFKWLKGHLKAAHDKTAIKDEVNVHDKESVRAEVKDDIEKDKEDKQDSPKITSPIAKRTRSAVKKCETNDGDYDDTFWESRCRNDFVIKTEVKQECLDSSDDEIWIVQTADDEGDQQLQHLLLADQNGQDQNEDKKHKCDNCGQQFLSREGLKSHKCKRTGRKRKSLVKDEAVIYVPTQEDFIKRAQGRPRQVDVGDKDLLPARTRKKKTKEPSSDPQTVTCHNCNESFTSKVRLKFHMQFHETTSMLTEDGEYTCTECTNAVFQTETELFDHVHFQHHKQTRWQCPVAGCGKTFYLRATLTKHSRTHTGTRRYVCGTCGKRFLDKQTLDEHGVTHLQIKPFQCHVCLKQLTRRSRLRMHLRAHEEELRPRHVLVCAICERAFRDANDVQEHLTRSPECIDDFANQLKDEQAVTVQLSPTSGLVSQAVVIESSKLSRPIRAQVDGAIADSLLSQVSDEARAIVRVVEIEKAFRCEFCEDVFYSEDGLNNHRVIHKNVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPLADAKKQASKETHEAGPSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHAQDNFVFECNQCGMNFPNSWSAAYHRKKAHVKLEQDDATSTRTVKEKEDYKIPCRDCDEVLPNKTALYKHRKKEHSDASLRAHVTDTINNIKPGISTEVFRARSPQRAARPACAKCGRSFDDLHLLREHLKEVHSQSDTGPFLPLVATSQSHTQTHAQSRTQAHAYARTQTHARAHACAVCGHAFRTLSMLNEHLRIHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACARCPKRFRIRSDLRTHLRLKHPAHLAVIEVLGLNPSPEEVMEHLNLNNIPHDKVIEITKISFTKGSTSIVPDSSRALSALSDVPRTQVACSRLRPERTFSVDEFQPSRRGRGIAKNPRRPKILQRGVPTPSVDPTVYPVALSVGEQELSELNVQMLLRDGMLVNGNQLVQLQLSDSMMLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -